Conservation of cofitness between IAI47_08920 and IAI47_02850 in Pantoea sp. MT58

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pantoea sp. MT58 1.0 IAI47_08920 YeaH/YhbH family protein 1.0 IAI47_02850 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.33 19
Erwinia tracheiphila SCR3 0.89 LU632_RS13015 YeaH/YhbH family protein 0.83 LU632_RS02230 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 74
Serratia liquefaciens MT49 0.88 IAI46_14380 YeaH/YhbH family protein 0.78 IAI46_22295 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 86
Klebsiella michiganensis M5al 0.88 BWI76_RS11480 hypothetical protein 0.75 BWI76_RS24910 rRNA (cytidine-2'-O-)-methyltransferase low > 92
Enterobacter asburiae PDN3 0.88 EX28DRAFT_1777 Uncharacterized conserved protein 0.77 EX28DRAFT_3195 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 76
Enterobacter sp. TBS_079 0.87 MPMX20_01839 hypothetical protein 0.77 MPMX20_04050 Ribosomal RNA small subunit methyltransferase I low > 85
Rahnella sp. WP5 0.87 EX31_RS06255 YeaH/YhbH family protein 0.82 EX31_RS12550 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 89
Escherichia fergusonii Becca 0.86 EFB2_02210 hypothetical protein 0.81 EFB2_00677 Ribosomal RNA small subunit methyltransferase I low > 86
Escherichia coli Nissle 1917 0.86 ECOLIN_RS09945 YeaH/YhbH family protein 0.81 ECOLIN_RS18085 16S rRNA (cytidine(1402)-2'-O)-methyltransferase — —
Escherichia coli ECRC101 0.86 OKFHMN_26705 yeaH UPF0229 protein YeaH 0.81 OKFHMN_18235 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase — —
Escherichia coli ECRC101 0.86 MCAODC_18705 yeaH UPF0229 protein YeaH 0.81 MCAODC_08755 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase — —
Escherichia coli ECOR27 0.86 NOLOHH_17235 yeaH UPF0229 protein YeaH 0.80 NOLOHH_10035 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase — —
Escherichia coli ECRC102 0.86 NIAGMN_01360 yeaH UPF0229 protein YeaH 0.81 NIAGMN_15995 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.86 OHPLBJKB_01948 hypothetical protein 0.80 OHPLBJKB_00555 Ribosomal RNA small subunit methyltransferase I low > 73
Escherichia coli BL21 0.86 ECD_01753 UPF0229 family protein 0.81 ECD_03013 16S rRNA C1402 2'-O-ribose methyltransferase, SAM-dependent — —
Escherichia coli ECOR38 0.86 HEPCGN_05095 yeaH UPF0229 protein YeaH 0.81 HEPCGN_17110 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 85
Escherichia coli ECRC98 0.86 JDDGAC_01280 yeaH UPF0229 protein YeaH 0.81 JDDGAC_21860 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase — —
Escherichia coli ECRC62 0.86 BNILDI_16020 yeaH UPF0229 protein YeaH 0.80 BNILDI_01495 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase — —
Escherichia coli ECRC99 0.86 KEDOAH_01405 yeaH UPF0229 protein YeaH 0.81 KEDOAH_09915 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase — —
Escherichia coli BW25113 0.86 b1784 yeaH yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.81 b3146 yraL predicted methyltransferase (NCBI) low > 76
Pectobacterium carotovorum WPP14 0.85 HER17_RS11155 YeaH/YhbH family protein 0.82 HER17_RS19860 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF3472 UPF0229 protein YeaH 0.78 GFF1521 rRNA small subunit methyltransferase I low > 78
Dickeya dadantii 3937 0.83 DDA3937_RS10240 YeaH/YhbH family protein 0.79 DDA3937_RS01715 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 74
Dickeya dianthicola 67-19 0.82 HGI48_RS10250 YeaH/YhbH family protein 0.80 HGI48_RS01610 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.72 4
Dickeya dianthicola ME23 0.82 DZA65_RS10725 YeaH/YhbH family protein 0.79 DZA65_RS01685 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 75
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_09385 hypothetical protein 0.66 CSW01_03090 rRNA (cytidine-2'-O-)-methyltransferase low > 62
Alteromonas macleodii MIT1002 0.68 MIT1002_01232 hypothetical protein 0.47 MIT1002_03113 Ribosomal RNA small subunit methyltransferase I low > 70
Shewanella loihica PV-4 0.67 Shew_1832 hypothetical protein (RefSeq) 0.62 Shew_0228 uroporphyrin-III C/tetrapyrrole methyltransferase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.65 SO2883 yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.58 SO0301 hypothetical methyltransferase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.65 Sama_1922 yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) 0.59 Sama_3353 hypothetical protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.62 Shewana3_1637 hypothetical protein (RefSeq) 0.57 Shewana3_3879 hypothetical protein (RefSeq) low > 73
Marinobacter adhaerens HP15 0.57 HP15_2934 protein YeaH 0.49 HP15_554 tetrapyrrole methylase family protein low > 73
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_4800 yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) 0.55 Pf6N2E2_5346 rRNA small subunit methyltransferase I low > 103
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_14310 yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) 0.55 AO356_17110 methyltransferase low > 104
Pseudomonas fluorescens SBW25 0.56 PFLU_RS27490 YeaH/YhbH family protein 0.55 PFLU_RS04655 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.56 PFLU_RS27490 YeaH/YhbH family protein 0.55 PFLU_RS04655 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 109
Pseudomonas putida KT2440 0.56 PP_0396 conserved protein of unknown function 0.52 PP_1326 16S rRNA 2'-O-ribose C1402 methyltransferase low > 96
Pseudomonas sp. RS175 0.56 PFR28_04069 hypothetical protein 0.55 PFR28_03597 Ribosomal RNA small subunit methyltransferase I low > 88
Pseudomonas stutzeri RCH2 0.56 Psest_3673 Uncharacterized conserved protein 0.55 Psest_3270 probable S-adenosylmethionine-dependent methyltransferase, YraL family low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_4632 Protein of unknown function DUF444 0.54 Psyr_4112 Protein of unknown function UPF0011 low > 86
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_4632 Protein of unknown function DUF444 0.54 Psyr_4112 Protein of unknown function UPF0011 low > 86
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_2522 FIG002076: hypothetical protein 0.54 Pf1N1B4_953 rRNA small subunit methyltransferase I — —
Pseudomonas simiae WCS417 0.55 PS417_25835 hypothetical protein 0.55 PS417_04590 methyltransferase low > 88
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_1195 FIG002076: hypothetical protein 0.52 PfGW456L13_1643 rRNA small subunit methyltransferase I low > 87
Pseudomonas sp. S08-1 0.55 OH686_15015 UPF0229 protein YeaH 0.53 OH686_08340 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 80
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_07340 yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.55 AO353_15290 methyltransferase low > 101
Herbaspirillum seropedicae SmR1 0.52 HSERO_RS21695 hypothetical protein 0.47 HSERO_RS23345 16S rRNA methyltransferase low > 78
Paraburkholderia graminis OAS925 0.51 ABIE53_002317 uncharacterized sporulation protein YeaH/YhbH (DUF444 family) 0.36 ABIE53_000470 16S rRNA (cytidine1402-2'-O)-methyltransferase low > 113
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS14215 YeaH/YhbH family protein 0.33 ABZR87_RS03815 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 80
Paraburkholderia bryophila 376MFSha3.1 0.51 H281DRAFT_05233 hypothetical protein 0.37 H281DRAFT_02152 16S rRNA (cytidine1402-2'-O)-methyltransferase low > 103
Paraburkholderia sabiae LMG 24235 0.50 QEN71_RS07380 YeaH/YhbH family protein 0.40 QEN71_RS00655 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 153
Variovorax sp. SCN45 0.50 GFF2934 FIG002076: hypothetical protein 0.34 GFF3735 16S rRNA (cytidine(1402)-2'-O)-methyltransferase (EC 2.1.1.198) low > 127
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS11185 hypothetical protein 0.38 BPHYT_RS01940 16S rRNA methyltransferase low > 109
Cupriavidus basilensis FW507-4G11 0.50 RR42_RS36480 hypothetical protein 0.36 RR42_RS19740 16S rRNA methyltransferase 0.27 107
Acidovorax sp. GW101-3H11 0.50 Ac3H11_1146 FIG002076: hypothetical protein 0.33 Ac3H11_4466 rRNA small subunit methyltransferase I — —
Variovorax sp. OAS795 0.49 ABID97_RS10265 YeaH/YhbH family protein 0.33 ABID97_RS00285 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 91
Magnetospirillum magneticum AMB-1 0.46 AMB_RS10890 hypothetical protein 0.35 AMB_RS22780 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 64
Phaeobacter inhibens DSM 17395 0.41 PGA1_c02480 Uncharacterized conserved protein 0.26 PGA1_c26730 probable S-adenosylmethionine-dependent methyltransferase, YraL family low > 62
Azospirillum brasilense Sp245 0.40 AZOBR_RS12650 hypothetical protein 0.30 AZOBR_RS02155 16S rRNA methyltransferase low > 97
Rhizobium sp. OAE497 0.40 ABIE40_RS12545 YeaH/YhbH family protein 0.36 ABIE40_RS01370 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 107
Sinorhizobium meliloti 1021 0.40 SMc01266 hypothetical protein 0.36 SMc00416 hypothetical protein low > 103
Castellaniella sp019104865 MT123 0.13 ABCV34_RS05545 DUF444 family protein 0.35 ABCV34_RS14320 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 48

Not shown: 2 genomes with orthologs for IAI47_08920 only; 22 genomes with orthologs for IAI47_02850 only