Conservation of cofitness between IAI47_03725 and IAI47_00920 in Pantoea sp. MT58

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pantoea sp. MT58 1.0 IAI47_03725 phosphoglycerate dehydrogenase 1.0 IAI47_00920 argininosuccinate lyase 0.92 5
Klebsiella michiganensis M5al 0.89 BWI76_RS23920 D-3-phosphoglycerate dehydrogenase 0.90 BWI76_RS00855 argininosuccinate lyase 0.84 4
Pectobacterium carotovorum WPP14 0.88 HER17_RS02725 phosphoglycerate dehydrogenase 0.88 HER17_RS20620 argininosuccinate lyase 0.78 63
Erwinia tracheiphila SCR3 0.87 LU632_RS05855 serA phosphoglycerate dehydrogenase 0.89 LU632_RS19600 argH argininosuccinate lyase low > 74
Enterobacter sp. TBS_079 0.87 MPMX20_03771 D-3-phosphoglycerate dehydrogenase 0.89 MPMX20_04520 Argininosuccinate lyase 0.89 16
Enterobacter asburiae PDN3 0.86 EX28DRAFT_2965 Phosphoglycerate dehydrogenase and related dehydrogenases 0.89 EX28DRAFT_4422 argininosuccinate lyase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF3013 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.90 GFF2346 Argininosuccinate lyase (EC 4.3.2.1) low > 78
Escherichia coli ECRC101 0.85 OKFHMN_19460 serA phosphoglycerate dehydrogenase 0.88 OKFHMN_13575 argH argininosuccinate lyase — —
Escherichia coli ECRC102 0.85 NIAGMN_17225 serA phosphoglycerate dehydrogenase 0.87 NIAGMN_11325 argH argininosuccinate lyase — —
Escherichia coli BW25113 0.85 b2913 serA D-3-phosphoglycerate dehydrogenase (NCBI) 0.88 b3960 argH argininosuccinate lyase (NCBI) 0.92 5
Escherichia coli ECRC101 0.85 MCAODC_09980 serA phosphoglycerate dehydrogenase 0.88 MCAODC_04075 argH argininosuccinate lyase — —
Escherichia coli BL21 0.85 ECD_02744 D-3-phosphoglycerate dehydrogenase 0.88 ECD_03845 argininosuccinate lyase 0.77 11
Escherichia coli ECRC99 0.85 KEDOAH_08680 serA phosphoglycerate dehydrogenase 0.88 KEDOAH_14585 argH argininosuccinate lyase — —
Escherichia coli ECRC98 0.85 JDDGAC_23100 serA phosphoglycerate dehydrogenase 0.88 JDDGAC_17200 argH argininosuccinate lyase — —
Serratia liquefaciens MT49 0.85 IAI46_20900 phosphoglycerate dehydrogenase 0.87 IAI46_24500 argininosuccinate lyase 0.78 18
Escherichia coli HS(pFamp)R (ATCC 700891) 0.85 OHPLBJKB_00803 D-3-phosphoglycerate dehydrogenase 0.88 OHPLBJKB_04090 Argininosuccinate lyase low > 73
Escherichia coli Nissle 1917 0.85 ECOLIN_RS16210 phosphoglycerate dehydrogenase 0.89 ECOLIN_RS22855 argininosuccinate lyase low > 52
Escherichia coli ECOR38 0.85 HEPCGN_18760 serA phosphoglycerate dehydrogenase 0.88 HEPCGN_12220 argH argininosuccinate lyase low > 85
Escherichia coli ECOR27 0.85 NOLOHH_11370 serA phosphoglycerate dehydrogenase 0.88 NOLOHH_05720 argH argininosuccinate lyase low > 57
Escherichia fergusonii Becca 0.85 EFB2_00990 D-3-phosphoglycerate dehydrogenase 0.89 EFB2_04654 Argininosuccinate lyase low > 86
Escherichia coli ECRC62 0.85 BNILDI_09905 serA phosphoglycerate dehydrogenase 0.88 BNILDI_05805 argH argininosuccinate lyase — —
Rahnella sp. WP5 0.84 EX31_RS21470 phosphoglycerate dehydrogenase 0.87 EX31_RS14180 argininosuccinate lyase 0.82 30
Dickeya dadantii 3937 0.84 DDA3937_RS18480 phosphoglycerate dehydrogenase 0.87 DDA3937_RS20340 argininosuccinate lyase 0.74 52
Dickeya dianthicola 67-19 0.83 HGI48_RS18400 phosphoglycerate dehydrogenase 0.86 HGI48_RS00885 argininosuccinate lyase low > 71
Dickeya dianthicola ME23 0.83 DZA65_RS19540 phosphoglycerate dehydrogenase 0.85 DZA65_RS00945 argininosuccinate lyase 0.68 24
Vibrio cholerae E7946 ATCC 55056 0.73 CSW01_12555 phosphoglycerate dehydrogenase 0.74 CSW01_13360 argininosuccinate lyase low > 62
Alteromonas macleodii MIT1002 0.70 MIT1002_02993 D-3-phosphoglycerate dehydrogenase 0.56 MIT1002_00467 Argininosuccinate lyase 0.89 19
Shewanella loihica PV-4 0.69 Shew_3196 D-3-phosphoglycerate dehydrogenase (RefSeq) 0.62 Shew_0206 argininosuccinate lyase (RefSeq) 0.98 22
Shewanella amazonensis SB2B 0.69 Sama_2949 D-3-phosphoglycerate dehydrogenase (RefSeq) 0.65 Sama_0260 argininosuccinate lyase (RefSeq) 0.84 56
Shewanella sp. ANA-3 0.69 Shewana3_3416 D-3-phosphoglycerate dehydrogenase (RefSeq) 0.62 Shewana3_3901 argininosuccinate lyase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.69 SO0862 serA D-3-phosphoglycerate dehydrogenase (NCBI ptt file) 0.61 SO0279 argH argininosuccinate lyase (NCBI ptt file) 0.88 21
Marinobacter adhaerens HP15 0.66 HP15_2554 D-3-phosphoglycerate dehydrogenase-like protein 0.46 HP15_243 argininosuccinate lyase — —
Pseudomonas sp. S08-1 0.66 OH686_11280 D-3-phosphoglycerate dehydrogenase 0.47 OH686_13885 argininosuccinate lyase low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_4852 D-3-phosphoglycerate dehydrogenase 0.45 Psyr_0065 argininosuccinate lyase — —
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_4852 D-3-phosphoglycerate dehydrogenase 0.45 Psyr_0065 argininosuccinate lyase — —
Pseudomonas fluorescens FW300-N1B4 0.66 Pf1N1B4_2272 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.46 Pf1N1B4_2183 Argininosuccinate lyase (EC 4.3.2.1) — —
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_08510 3-phosphoglycerate dehydrogenase 0.45 AO353_09000 argininosuccinate lyase 0.69 43
Pseudomonas fluorescens GW456-L13 0.65 PfGW456L13_943 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.45 PfGW456L13_854 Argininosuccinate lyase (EC 4.3.2.1) 0.70 57
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_3932 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.45 Pf6N2E2_4429 Argininosuccinate lyase (EC 4.3.2.1) — —
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_10300 3-phosphoglycerate dehydrogenase 0.45 AO356_12780 argininosuccinate lyase 0.86 24
Pseudomonas putida KT2440 0.65 PP_5155 D-3-phosphoglycerate dehydrogenase / alpha-ketoglutarate reductase 0.45 PP_0184 Argininosuccinate lyase 0.75 20
Pseudomonas stutzeri RCH2 0.65 Psest_3873 Phosphoglycerate dehydrogenase and related dehydrogenases 0.45 Psest_3751 argininosuccinate lyase — —
Pseudomonas fluorescens SBW25 0.65 PFLU_RS28695 phosphoglycerate dehydrogenase 0.46 PFLU_RS29220 argininosuccinate lyase — —
Pseudomonas fluorescens SBW25-INTG 0.65 PFLU_RS28695 phosphoglycerate dehydrogenase 0.46 PFLU_RS29220 argininosuccinate lyase — —
Acidovorax sp. GW101-3H11 0.64 Ac3H11_4790 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.42 Ac3H11_1632 Argininosuccinate lyase (EC 4.3.2.1) — —
Pseudomonas sp. RS175 0.64 PFR28_04842 D-3-phosphoglycerate dehydrogenase 0.45 PFR28_04367 Argininosuccinate lyase — —
Pseudomonas simiae WCS417 0.64 PS417_27040 3-phosphoglycerate dehydrogenase 0.45 PS417_27540 argininosuccinate lyase — —
Acinetobacter radioresistens SK82 0.63 MPMX26_02773 D-3-phosphoglycerate dehydrogenase 0.43 MPMX26_00185 Argininosuccinate lyase 0.85 32
Kangiella aquimarina DSM 16071 0.63 B158DRAFT_0518 Phosphoglycerate dehydrogenase and related dehydrogenases 0.23 B158DRAFT_1980 argininosuccinate lyase low > 40
Variovorax sp. OAS795 0.63 ABID97_RS07235 phosphoglycerate dehydrogenase 0.43 ABID97_RS08190 argininosuccinate lyase — —
Rhodanobacter denitrificans MT42 0.62 LRK55_RS02935 phosphoglycerate dehydrogenase 0.19 LRK55_RS02135 argininosuccinate lyase low > 63
Rhodanobacter denitrificans FW104-10B01 0.62 LRK54_RS03185 phosphoglycerate dehydrogenase 0.19 LRK54_RS02380 argininosuccinate lyase 0.61 48
Dyella japonica UNC79MFTsu3.2 0.62 ABZR86_RS09635 phosphoglycerate dehydrogenase 0.19 ABZR86_RS08695 arginosuccinate lyase (EC 4.3.2.1) (from data) 0.92 33
Variovorax sp. SCN45 0.62 GFF2538 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.42 GFF3824 Argininosuccinate lyase (EC 4.3.2.1) — —
Xanthomonas campestris pv. campestris strain 8004 0.62 Xcc-8004.2931.1 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.18 Xcc-8004.2323.1 Argininosuccinate lyase (EC 4.3.2.1) 0.77 35
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF149 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.42 GFF736 Argininosuccinate lyase (EC 4.3.2.1) — —
Rhodanobacter sp. FW510-T8 0.61 OKGIIK_10055 serA phosphoglycerate dehydrogenase 0.19 OKGIIK_09430 argH argininosuccinate lyase low > 52
Lysobacter sp. OAE881 0.60 ABIE51_RS13245 phosphoglycerate dehydrogenase 0.21 ABIE51_RS13380 argininosuccinate lyase 0.87 46
Rhodospirillum rubrum S1H 0.58 Rru_A2456 Phosphoglycerate dehydrogenase (NCBI) 0.41 Rru_A0397 Argininosuccinate lyase (NCBI) — —
Rhizobium sp. OAE497 0.57 ABIE40_RS30040 phosphoglycerate dehydrogenase 0.43 ABIE40_RS17520 argininosuccinate lyase — —
Bosea sp. OAE506 0.56 ABIE41_RS08410 phosphoglycerate dehydrogenase 0.43 ABIE41_RS08750 argininosuccinate lyase — —
Azospirillum sp. SherDot2 0.55 MPMX19_00753 D-3-phosphoglycerate dehydrogenase 0.44 MPMX19_05817 Argininosuccinate lyase — —
Azospirillum brasilense Sp245 0.55 AZOBR_RS10940 3-phosphoglycerate dehydrogenase 0.44 AZOBR_RS16935 argininosuccinate lyase — —
Castellaniella sp019104865 MT123 0.52 ABCV34_RS15150 phosphoglycerate dehydrogenase 0.43 ABCV34_RS03060 argininosuccinate lyase — —
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS27010 D-3-phosphoglycerate dehydrogenase 0.41 RR42_RS15925 argininosuccinate lyase — —
Bifidobacterium breve UCC2003 0.44 BBR_RS16970 phosphoglycerate dehydrogenase 0.34 BBR_RS13955 argininosuccinate lyase low > 34

Not shown: 0 genomes with orthologs for IAI47_03725 only; 36 genomes with orthologs for IAI47_00920 only