Conservation of cofitness between HSERO_RS01560 and HSERO_RS19595 in Herbaspirillum seropedicae SmR1

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS01560 transporter 1.0 HSERO_RS19595 glutamate synthase 0.37 7
Dechlorosoma suillum PS 0.79 Dsui_2026 hydrophobe/amphiphile efflux-1 (HAE1) family transporter 0.70 Dsui_1096 glutamate synthase family protein low > 51
Paraburkholderia sabiae LMG 24235 0.77 QEN71_RS20105 efflux RND transporter permease subunit 0.80 QEN71_RS28010 glutamate synthase-related protein low > 153
Burkholderia phytofirmans PsJN 0.77 BPHYT_RS22515 multidrug efflux RND transporter permease subunit 0.81 BPHYT_RS17855 glutamate synthase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.76 H281DRAFT_03190 multidrug efflux pump 0.81 H281DRAFT_05620 glutamate synthase (NADH) large subunit low > 103
Ralstonia sp. UNC404CL21Col 0.73 ABZR87_RS19400 efflux RND transporter permease subunit 0.80 ABZR87_RS02570 glutamate synthase-related protein low > 80
Ralstonia solanacearum PSI07 0.72 RPSI07_RS05175 multidrug efflux RND transporter permease subunit 0.81 RPSI07_RS10320 glutamate synthase subunit alpha low > 81
Ralstonia solanacearum UW163 0.72 UW163_RS20755 multidrug efflux RND transporter permease subunit 0.81 UW163_RS06700 glutamate synthase subunit alpha — —
Ralstonia solanacearum IBSBF1503 0.71 RALBFv3_RS18375 multidrug efflux RND transporter permease subunit 0.81 RALBFv3_RS06915 glutamate synthase subunit alpha low > 76
Azospirillum sp. SherDot2 0.71 MPMX19_02968 multidrug efflux RND transporter permease subunit OqxB28 0.41 MPMX19_02657 Glutamate synthase [NADPH] large chain low > 112
Ralstonia solanacearum GMI1000 0.71 RS_RS22490 multidrug efflux RND transporter permease subunit 0.81 RS_RS14860 glutamate synthase subunit alpha low > 80
Cupriavidus basilensis FW507-4G11 0.69 RR42_RS27685 multidrug efflux RND transporter permease subunit 0.80 RR42_RS18990 glutamate synthase low > 128
Acidovorax sp. GW101-3H11 0.69 Ac3H11_258 RND multidrug efflux transporter; Acriflavin resistance protein 0.78 Ac3H11_4710 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 79
Variovorax sp. SCN45 0.68 GFF429 RND efflux system, inner membrane transporter 0.78 GFF5332 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 127
Magnetospirillum magneticum AMB-1 0.67 AMB_RS09480 multidrug efflux RND transporter permease subunit 0.38 AMB_RS02685 glutamate synthase large subunit low > 64
Variovorax sp. OAS795 0.67 ABID97_RS17350 efflux RND transporter permease subunit 0.78 ABID97_RS23225 glutamate synthase-related protein low > 91
Rhizobium sp. OAE497 0.67 ABIE40_RS14875 multidrug efflux RND transporter permease subunit 0.60 ABIE40_RS16275 glutamate synthase large subunit — —
Rhodospirillum rubrum S1H 0.66 Rru_A0886 Hydrophobe/amphiphile efflux-1 HAE1 (NCBI) 0.40 Rru_A0019 Glutamate synthase (ferredoxin) (NCBI) — —
Pseudomonas sp. RS175 0.66 PFR28_02013 multidrug efflux RND transporter permease subunit OqxB10 0.37 PFR28_05015 Glutamate synthase [NADPH] large chain low > 88
Sinorhizobium meliloti 1021 0.66 SMc01095 multidrug-efflux system transmembrane protein 0.61 SMc04028 glutamate synthase 0.26 45
Agrobacterium fabrum C58 0.63 Atu2483 AcrB/AcrD/AcrF family protein 0.61 Atu3784 glutamate synthase large subunit low > 89
Pseudomonas syringae pv. syringae B728a 0.62 Psyr_2968 Hydrophobe/amphiphile efflux-1 HAE1 0.38 Psyr_0411 glutamate synthase (NADPH) large subunit low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.62 Psyr_2968 Hydrophobe/amphiphile efflux-1 HAE1 0.38 Psyr_0411 glutamate synthase (NADPH) large subunit low > 86
Pseudomonas fluorescens FW300-N2C3 0.62 AO356_27605 transporter 0.37 AO356_09375 glutamate synthase low > 104
Pseudomonas putida KT2440 0.61 PP_3426 Multidrug efflux RND transporter MexF 0.37 PP_5076 L-glutamate synthase(NADPH) alpha subunit low > 96
Pseudomonas simiae WCS417 0.61 PS417_13190 transporter 0.37 PS417_02000 glutamate synthase low > 88
Pseudomonas fluorescens SBW25 0.61 PFLU_RS14260 efflux RND transporter permease subunit 0.37 PFLU_RS02045 glutamate synthase large subunit low > 109
Pseudomonas fluorescens SBW25-INTG 0.61 PFLU_RS14260 efflux RND transporter permease subunit 0.37 PFLU_RS02045 glutamate synthase large subunit low > 109
Pseudomonas fluorescens FW300-N2E3 0.61 AO353_23960 transporter 0.37 AO353_12515 glutamate synthase low > 101
Pseudomonas fluorescens GW456-L13 0.61 PfGW456L13_3060 Multidrug efflux transporter MexF 0.37 PfGW456L13_272 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 87
Rhodanobacter denitrificans FW104-10B01 0.61 LRK54_RS08140 multidrug efflux RND transporter permease subunit 0.37 LRK54_RS10960 glutamate synthase large subunit low > 59
Pseudomonas fluorescens FW300-N1B4 0.61 Pf1N1B4_4864 Multidrug efflux transporter MexF 0.37 Pf1N1B4_1534 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 87
Pseudomonas fluorescens FW300-N2E2 0.61 Pf6N2E2_824 Multidrug efflux transporter MexF 0.37 Pf6N2E2_3752 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 103
Rhodanobacter denitrificans MT42 0.61 LRK55_RS07890 efflux RND transporter permease subunit 0.37 LRK55_RS10665 glutamate synthase large subunit low > 63
Rhodanobacter sp. FW510-T8 0.60 OKGIIK_14955 oqxB multidrug efflux RND transporter permease subunit 0.77 OKGIIK_15200 Glutamate synthase subunit alpha low > 52
Pseudomonas stutzeri RCH2 0.60 Psest_2144 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 0.37 Psest_3711 Glutamate synthase domain 2 low > 67
Pseudomonas sp. S08-1 0.60 OH686_01005 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) 0.37 OH686_10005 Glutamate synthase [NADPH] large chain low > 80
Dyella japonica UNC79MFTsu3.2 0.60 ABZR86_RS15400 efflux RND transporter permease subunit 0.37 ABZR86_RS16795 glutamate synthase large subunit low > 74
Shewanella oneidensis MR-1 0.59 SO3492 mexF RND multidrug efflux transporter MexF (NCBI ptt file) 0.38 SO1325 gltB glutamate synthase, large subunit (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.59 Shewana3_1078 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) 0.38 Shewana3_3050 gltB glutamate synthase subunit alpha (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.58 MIT1002_02998 Efflux pump membrane transporter BepE 0.38 MIT1002_03139 Glutamate synthase [NADPH] large chain precursor low > 70
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.56 GFF4246 RND efflux system, inner membrane transporter CmeB 0.38 GFF2956 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 78
Xanthomonas campestris pv. campestris strain 8004 0.56 Xcc-8004.3477.1 RND efflux system, inner membrane transporter CmeB 0.37 Xcc-8004.44.1 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) 0.32 47
Klebsiella michiganensis M5al 0.55 BWI76_RS12955 multidrug efflux RND transporter permease subunit OqxB 0.39 BWI76_RS25315 glutamate synthase large subunit low > 92
Rahnella sp. WP5 0.55 EX31_RS01495 multidrug efflux RND transporter permease subunit 0.39 EX31_RS12515 glutamate synthase large subunit low > 89
Enterobacter sp. TBS_079 0.55 MPMX20_01155 multidrug efflux RND transporter permease subunit OqxB3 0.39 MPMX20_04126 Glutamate synthase [NADPH] large chain low > 85
Enterobacter asburiae PDN3 0.54 EX28DRAFT_1472 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 0.39 EX28DRAFT_3275 Glutamate synthase domain 2 low > 76
Serratia liquefaciens MT49 0.54 IAI46_13385 efflux RND transporter permease subunit 0.39 IAI46_22345 glutamate synthase large subunit low > 86
Sphingomonas koreensis DSMZ 15582 0.53 Ga0059261_0436 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 0.39 Ga0059261_1800 Glutamate synthase domain 2 low > 68
Brevundimonas sp. GW460-12-10-14-LB2 0.45 A4249_RS09925 multidrug efflux RND transporter permease subunit 0.36 A4249_RS16105 glutamate synthase large subunit low > 48
Shewanella loihica PV-4 0.44 Shew_1164 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) 0.39 Shew_1032 gltB glutamate synthase subunit alpha (RefSeq) 0.54 21

Not shown: 4 genomes with orthologs for HSERO_RS01560 only; 42 genomes with orthologs for HSERO_RS19595 only