| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Herbaspirillum seropedicae SmR1 | 1.0 | HSERO_RS23825 | | hypothetical protein | 1.0 | HSERO_RS16515 | | isopropylmalate isomerase | 0.46 | 14 |
| Burkholderia phytofirmans PsJN | 0.29 | BPHYT_RS19575 | | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | 0.81 | BPHYT_RS33915 | | isopropylmalate isomerase | low | > 109 |
| Paraburkholderia graminis OAS925 | 0.28 | ABIE53_000291 | | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein | 0.80 | ABIE53_004801 | | 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.27 | H281DRAFT_02360 | | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein | 0.81 | H281DRAFT_06075 | | 3-isopropylmalate dehydratase, large subunit | low | > 103 |
| Ralstonia sp. UNC404CL21Col | 0.27 | ABZR87_RS12805 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.82 | ABZR87_RS14540 | | 3-isopropylmalate dehydratase large subunit | low | > 80 |
| Paraburkholderia sabiae LMG 24235 | 0.26 | QEN71_RS29485 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.80 | QEN71_RS17605 | | 3-isopropylmalate dehydratase large subunit | low | > 153 |
| Ralstonia solanacearum GMI1000 | 0.25 | RS_RS08635 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.82 | RS_RS10000 | | 3-isopropylmalate dehydratase large subunit | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.25 | RPSI07_RS16115 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.82 | RPSI07_RS14695 | | 3-isopropylmalate dehydratase large subunit | low | > 81 |
| Ralstonia solanacearum UW163 | 0.24 | UW163_RS14670 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.82 | UW163_RS11105 | | 3-isopropylmalate dehydratase large subunit | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.24 | RALBFv3_RS01360 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.82 | RALBFv3_RS02620 | | 3-isopropylmalate dehydratase large subunit | low | > 76 |
| Dechlorosoma suillum PS | 0.21 | Dsui_2868 | | tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain protein | 0.74 | Dsui_3201 | | 3-isopropylmalate dehydratase, large subunit | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.21 | RR42_RS09010 | | FAD-dependent cmnm(5)s(2)U34 oxidoreductase | 0.80 | RR42_RS14400 | | isopropylmalate isomerase | low | > 128 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.20 | GFF1945 | | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase | 0.60 | GFF166 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | low | > 78 |
| Escherichia coli ECOR27 | 0.20 | NOLOHH_14275 | mnmC | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.62 | NOLOHH_03070 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | low | > 75 |
| Escherichia coli Nissle 1917 | 0.20 | ECOLIN_RS13465 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.62 | ECOLIN_RS00390 | | 3-isopropylmalate dehydratase large subunit | low | > 55 |
| Escherichia coli BW25113 | 0.20 | b2324 | b2324 | putative peptidase (VIMSS) | 0.62 | b0072 | leuC | isopropylmalate isomerase large subunit (NCBI) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.20 | OHPLBJKB_01381 | | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | 0.62 | OHPLBJKB_03585 | | 3-isopropylmalate dehydratase large subunit | low | > 73 |
| Escherichia coli ECOR38 | 0.20 | HEPCGN_21845 | mnmC | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.62 | HEPCGN_08705 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | low | > 87 |
| Escherichia fergusonii Becca | 0.20 | EFB2_01534 | | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | 0.62 | EFB2_03973 | | 3-isopropylmalate dehydratase large subunit | low | > 86 |
| Pseudomonas fluorescens FW300-N1B4 | 0.20 | Pf1N1B4_373 | | 5-methylaminomethyl-2-thiouridine-forming enzyme mnmC | 0.72 | Pf1N1B4_15 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | low | > 87 |
| Escherichia coli ECRC62 | 0.19 | BNILDI_13195 | mnmC | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.62 | BNILDI_08540 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | low | > 75 |
| Escherichia coli ECRC100 | 0.19 | OKFHMN_22640 | mnmC | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.61 | OKFHMN_10725 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | low | > 80 |
| Escherichia coli ECRC101 | 0.19 | MCAODC_13680 | mnmC | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.61 | MCAODC_01240 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | low | > 87 |
| Escherichia coli ECRC99 | 0.19 | KEDOAH_05555 | mnmC | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.61 | KEDOAH_17430 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | — | — |
| Escherichia coli ECRC98 | 0.19 | JDDGAC_26600 | mnmC | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.61 | JDDGAC_14320 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | low | > 86 |
| Pseudomonas fluorescens FW300-N2E3 | 0.19 | AO353_02165 | | FAD-dependent cmnm(5)s(2)U34 oxidoreductase | 0.72 | AO353_20620 | | isopropylmalate isomerase | low | > 101 |
| Escherichia coli ECRC102 | 0.19 | NIAGMN_20415 | mnmC | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.61 | NIAGMN_08575 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | — | — |
| Escherichia coli BL21 | 0.19 | ECD_02249 | | fused 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase and FAD-dependent demodification enzyme | 0.62 | ECD_00074 | | 3-isopropylmalate dehydratase large subunit | low | > 61 |
| Pseudomonas stutzeri RCH2 | 0.19 | Psest_1634 | | tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain | 0.71 | Psest_2591 | | 3-isopropylmalate dehydratase, large subunit | low | > 67 |
| Klebsiella michiganensis M5al | 0.19 | BWI76_RS20410 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.61 | BWI76_RS04670 | | 3-isopropylmalate dehydratase large subunit | low | > 92 |
| Pseudomonas fluorescens GW456-L13 | 0.19 | PfGW456L13_2155 | | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase | 0.72 | PfGW456L13_3948 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | low | > 87 |
| Pseudomonas sp. S08-1 | 0.19 | OH686_20990 | | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase / FAD-dependent cmnm(5)s(2)U34 oxidoreductase | 0.71 | OH686_04480 | | 3-isopropylmalate dehydratase large subunit | low | > 80 |
| Pseudomonas fluorescens FW300-N2C3 | 0.19 | AO356_03570 | | FAD-dependent cmnm(5)s(2)U34 oxidoreductase | 0.73 | AO356_21400 | | isopropylmalate isomerase | low | > 104 |
| Enterobacter asburiae PDN3 | 0.18 | EX28DRAFT_0280 | | tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain | 0.61 | EX28DRAFT_3668 | | 3-isopropylmalate dehydratase, large subunit | low | > 76 |
| Vibrio cholerae E7946 ATCC 55056 | 0.18 | CSW01_10535 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.60 | CSW01_12605 | | 3-isopropylmalate dehydratase large subunit | low | > 62 |
| Pseudomonas sp. RS175 | 0.18 | PFR28_00884 | | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | 0.73 | PFR28_02824 | | 3-isopropylmalate dehydratase large subunit | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.18 | Pf6N2E2_2541 | | 5-methylaminomethyl-2-thiouridine-forming enzyme mnmC | 0.72 | Pf6N2E2_63 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | low | > 103 |
| Serratia liquefaciens MT49 | 0.18 | IAI46_18000 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.61 | IAI46_03345 | | 3-isopropylmalate dehydratase large subunit | low | > 86 |
| Pectobacterium carotovorum WPP14 | 0.18 | HER17_RS06960 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.62 | HER17_RS03075 | | 3-isopropylmalate dehydratase large subunit | low | > 75 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.17 | Psyr_3742 | | FAD dependent oxidoreductase:Protein of unknown function DUF752 | 0.72 | Psyr_1983 | | 3-isopropylmalate dehydratase, large subunit | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.17 | Psyr_3742 | | FAD dependent oxidoreductase:Protein of unknown function DUF752 | 0.72 | Psyr_1983 | | 3-isopropylmalate dehydratase, large subunit | low | > 86 |
| Enterobacter sp. TBS_079 | 0.17 | MPMX20_03259 | | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | 0.61 | MPMX20_00767 | | 3-isopropylmalate dehydratase large subunit 1 | low | > 85 |
| Pseudomonas simiae WCS417 | 0.17 | PS417_19225 | | FAD-dependent cmnm(5)s(2)U34 oxidoreductase | 0.71 | PS417_18600 | | isopropylmalate isomerase | low | > 88 |
| Pseudomonas putida KT2440 | 0.17 | PP_1751 | | methyltransferase/FAD-dependent oxidoreductase | 0.72 | PP_1985 | | 3-isopropylmalate dehydratase large subunit | low | > 96 |
| Marinobacter adhaerens HP15 | 0.17 | HP15_1540 | | protein YfcK | 0.72 | HP15_1834 | | protein containing 3-isopropylmalate dehydratase, large subunit region domain | low | > 73 |
| Dickeya dadantii 3937 | 0.16 | DDA3937_RS14515 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.62 | DDA3937_RS18125 | | 3-isopropylmalate dehydratase large subunit | low | > 74 |
| Pantoea sp. MT58 | 0.16 | IAI47_06175 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.63 | IAI47_16010 | | 3-isopropylmalate dehydratase large subunit | low | > 76 |
| Dickeya dianthicola ME23 | 0.16 | DZA65_RS15420 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.62 | DZA65_RS19210 | | 3-isopropylmalate dehydratase large subunit | low | > 75 |
| Dickeya dianthicola 67-19 | 0.16 | HGI48_RS14485 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.62 | HGI48_RS18065 | | 3-isopropylmalate dehydratase large subunit | low | > 71 |
| Pseudomonas fluorescens SBW25 | 0.16 | PFLU_RS21190 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.71 | PFLU_RS20580 | | 3-isopropylmalate dehydratase large subunit | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.16 | PFLU_RS21190 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.71 | PFLU_RS20580 | | 3-isopropylmalate dehydratase large subunit | low | > 109 |
| Rahnella sp. WP5 | 0.15 | EX31_RS19660 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.62 | EX31_RS03690 | | 3-isopropylmalate dehydratase large subunit | low | > 89 |
| Shewanella sp. ANA-3 | 0.15 | Shewana3_1474 | | FAD dependent oxidoreductase (RefSeq) | 0.60 | Shewana3_3759 | | isopropylmalate isomerase large subunit (RefSeq) | low | > 73 |
| Acidovorax sp. GW101-3H11 | 0.14 | Ac3H11_579 | | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase | 0.75 | Ac3H11_1525 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | low | > 79 |
| Erwinia tracheiphila SCR3 | 0.14 | LU632_RS07800 | mnmC | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.59 | LU632_RS02870 | leuC | 3-isopropylmalate dehydratase large subunit | low | > 74 |
| Variovorax sp. SCN45 | 0.14 | GFF1245 | | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase | 0.75 | GFF3890 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | low | > 127 |
| Shewanella oneidensis MR-1 | 0.13 | SO3073 | | conserved hypothetical protein (NCBI ptt file) | 0.61 | SO4234 | leuC | 3-isopropylmalate dehydratase, large subunit (NCBI ptt file) | low | > 76 |
| Castellaniella sp019104865 MT123 | 0.13 | ABCV34_RS09580 | | FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.76 | ABCV34_RS04290 | | 3-isopropylmalate dehydratase large subunit | low | > 48 |
| Alteromonas macleodii MIT1002 | 0.12 | MIT1002_02542 | | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | 0.57 | MIT1002_00947 | | 3-isopropylmalate dehydratase large subunit | low | > 70 |
| Shewanella loihica PV-4 | 0.12 | Shew_2411 | | FAD dependent oxidoreductase (RefSeq) | 0.61 | Shew_3470 | | isopropylmalate isomerase large subunit (RefSeq) | low | > 60 |
| Variovorax sp. OAS795 | 0.12 | ABID97_RS15455 | | FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | 0.75 | ABID97_RS08465 | | 3-isopropylmalate dehydratase large subunit | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.11 | A4249_RS15340 | | tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD | 0.47 | A4249_RS10005 | | 3-isopropylmalate dehydratase large subunit | low | > 48 |
| Acinetobacter radioresistens SK82 | 0.09 | MPMX26_02642 | | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | 0.70 | MPMX26_00345 | | 3-isopropylmalate dehydratase large subunit | low | > 36 |
| Caulobacter crescentus NA1000 Δfur | 0.08 | CCNA_00785 | | tRNA methyltransferase/FAD-dependent oxidoreductase MnmC | 0.62 | CCNA_00196 | | 3-isopropylmalate dehydratase large subunit | low | > 67 |
| Caulobacter crescentus NA1000 | 0.08 | CCNA_00785 | | tRNA methyltransferase/FAD-dependent oxidoreductase MnmC | 0.62 | CCNA_00196 | | 3-isopropylmalate dehydratase large subunit | low | > 66 |
Not shown: 0 genomes with orthologs for HSERO_RS23825 only; 38 genomes with orthologs for HSERO_RS16515 only