Conservation of cofitness between HSERO_RS05455 and HSERO_RS05150 in Herbaspirillum seropedicae SmR1

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS05455 gamma-glutamyltranspeptidase 1.0 HSERO_RS05150 galactonate dehydratase 0.37 20
Azospirillum sp. SherDot2 0.72 MPMX19_05752 Glutathione hydrolase proenzyme 0.27 MPMX19_03902 D-galactonate dehydratase low > 112
Acidovorax sp. GW101-3H11 0.68 Ac3H11_1090 Gamma-glutamyltranspeptidase (EC 2.3.2.2) 0.80 Ac3H11_600 Galactonate dehydratase (EC 4.2.1.6) low > 79
Castellaniella sp019104865 MT123 0.65 ABCV34_RS11415 gamma-glutamyltransferase 0.15 ABCV34_RS14760 mandelate racemase/muconate lactonizing enzyme family protein low > 48
Klebsiella michiganensis M5al 0.59 BWI76_RS26275 gamma-glutamyltransferase 0.61 BWI76_RS27935 galactonate dehydratase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.58 GFF561 Gamma-glutamyltranspeptidase (EC 2.3.2.2) 0.61 GFF1765 Galactonate dehydratase (EC 4.2.1.6) low > 78
Escherichia coli ECOR38 0.58 HEPCGN_15620 ggt gamma-glutamyltransferase 0.62 HEPCGN_13775 dgoD galactonate dehydratase low > 87
Escherichia fergusonii Becca 0.58 EFB2_00375 Glutathione hydrolase proenzyme 0.62 EFB2_00011 D-galactonate dehydratase low > 86
Escherichia coli Nissle 1917 0.58 ECOLIN_RS19715 gamma-glutamyltransferase 0.62 ECOLIN_RS21265 galactonate dehydratase low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.58 OHPLBJKB_00256 Glutathione hydrolase proenzyme 0.62 OHPLBJKB_00011 D-galactonate dehydratase low > 73
Escherichia coli ECRC62 0.58 BNILDI_02915 ggt gamma-glutamyltransferase 0.62 BNILDI_04320 dgoD galactonate dehydratase low > 75
Escherichia coli ECOR27 0.58 NOLOHH_08590 ggt gamma-glutamyltransferase 0.62 NOLOHH_07210 dgoD galactonate dehydratase low > 75
Escherichia coli BW25113 0.58 b3447 ggt gamma-glutamyltranspeptidase periplasmic precursor (NCBI) 0.62 b4478 dgoD galactonate dehydratase (NCBI) low > 76
Enterobacter asburiae PDN3 0.58 EX28DRAFT_4279 gamma-glutamyltranspeptidase 0.61 EX28DRAFT_3979 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily low > 76
Escherichia coli BL21 0.58 ECD_03296 gamma-glutamyltranspeptidase 0.62 ECD_03575 D-galactonate dehydratase low > 61
Enterobacter sp. TBS_079 0.57 MPMX20_04323 Glutathione hydrolase proenzyme 0.60 MPMX20_00011 D-galactonate dehydratase low > 85
Pantoea sp. MT58 0.56 IAI47_01620 gamma-glutamyltransferase 0.63 IAI47_00045 galactonate dehydratase low > 76
Ralstonia solanacearum PSI07 0.45 RPSI07_RS01100 gamma-glutamyltransferase 0.63 RPSI07_RS11425 galactonate dehydratase low > 81
Sinorhizobium meliloti 1021 0.45 SM_b20585 gamma-glutamyltranspeptidase 0.80 SM_b20510 galactonate dehydratase low > 103
Serratia liquefaciens MT49 0.45 IAI46_04820 gamma-glutamyltransferase 0.25 IAI46_19025 D-galactonate dehydratase family protein low > 86
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS19795 gamma-glutamyltransferase 0.63 ABZR87_RS01445 galactonate dehydratase low > 80
Variovorax sp. OAS795 0.45 ABID97_RS09895 gamma-glutamyltransferase 0.18 ABID97_RS09975 L-rhamnonate dehydratase low > 91
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_0691 gamma-glutamyltransferase 1, Threonine peptidase, MEROPS family T03 0.88 Psyr_1989 galactonate dehydratase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_0691 gamma-glutamyltransferase 1, Threonine peptidase, MEROPS family T03 0.88 Psyr_1989 galactonate dehydratase low > 86
Rhizobium sp. OAE497 0.45 ABIE40_RS16090 gamma-glutamyltransferase 0.81 ABIE40_RS17095 galactonate dehydratase low > 107
Pseudomonas fluorescens SBW25 0.45 PFLU_RS13685 gamma-glutamyltransferase 0.88 PFLU_RS00160 galactonate dehydratase low > 109
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS13685 gamma-glutamyltransferase 0.88 PFLU_RS00160 galactonate dehydratase low > 109
Ralstonia solanacearum GMI1000 0.45 RS_RS18475 gamma-glutamyltransferase 0.63 RS_RS13765 D-galactonate dehydratase low > 80
Dickeya dianthicola ME23 0.45 DZA65_RS14700 gamma-glutamyltransferase 0.63 DZA65_RS07285 galactonate dehydratase low > 75
Rahnella sp. WP5 0.45 EX31_RS22075 gamma-glutamyltransferase 0.63 EX31_RS10320 galactonate dehydratase low > 89
Pseudomonas simiae WCS417 0.45 PS417_13045 gamma-glutamyltranspeptidase 0.88 PS417_00165 galactonate dehydratase low > 88
Pseudomonas fluorescens GW456-L13 0.44 PfGW456L13_2671 Gamma-glutamyltranspeptidase (EC 2.3.2.2) 0.88 PfGW456L13_2128 Galactonate dehydratase (EC 4.2.1.6) low > 87
Variovorax sp. SCN45 0.44 GFF3077 Gamma-glutamyltranspeptidase (EC 2.3.2.2) @ Glutathione hydrolase (EC 3.4.19.13) 0.25 GFF178 Mannonate dehydratase (EC 4.2.1.8) 0.47 19
Dickeya dianthicola 67-19 0.44 HGI48_RS14025 gamma-glutamyltransferase 0.63 HGI48_RS06940 galactonate dehydratase low > 71
Dickeya dadantii 3937 0.44 DDA3937_RS14030 gamma-glutamyltransferase 0.26 DDA3937_RS14965 D-galactonate dehydratase family protein low > 74
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_22255 gamma-glutamyltranspeptidase 0.88 AO356_20290 galactonate dehydratase low > 104
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_313 Gamma-glutamyltranspeptidase (EC 2.3.2.2) 0.88 Pf6N2E2_5977 Galactonate dehydratase (EC 4.2.1.6) low > 103
Pseudomonas sp. RS175 0.44 PFR28_02593 Glutathione hydrolase proenzyme 0.88 PFR28_02985 D-galactonate dehydratase low > 88
Pectobacterium carotovorum WPP14 0.44 HER17_RS00330 gamma-glutamyltransferase 0.28 HER17_RS07505 mandelate racemase/muconate lactonizing enzyme family protein low > 75
Pseudomonas fluorescens FW300-N1B4 0.44 Pf1N1B4_4081 Gamma-glutamyltranspeptidase (EC 2.3.2.2) 0.88 Pf1N1B4_398 Galactonate dehydratase (EC 4.2.1.6) low > 87
Pedobacter sp. GW460-11-11-14-LB5 0.42 CA265_RS17620 gamma-glutamyltransferase 0.23 CA265_RS13665 galactonate dehydratase low > 88
Caulobacter crescentus NA1000 0.40 CCNA_01035 gamma-glutamyltranspeptidase 0.26 CCNA_00566 mannonate dehydratase low > 66
Caulobacter crescentus NA1000 Δfur 0.40 CCNA_01035 gamma-glutamyltranspeptidase 0.26 CCNA_00566 mannonate dehydratase low > 67
Echinicola vietnamensis KMM 6221, DSM 17526 0.38 Echvi_3948 gamma-glutamyltranspeptidase 0.61 Echvi_3769 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily low > 79
Paraburkholderia sabiae LMG 24235 0.36 QEN71_RS14675 gamma-glutamyltransferase 0.83 QEN71_RS02295 galactonate dehydratase 0.34 58
Alteromonas macleodii MIT1002 0.36 MIT1002_00538 Gamma-glutamyltranspeptidase precursor 0.24 MIT1002_00725 D-galactonate dehydratase low > 70
Burkholderia phytofirmans PsJN 0.36 BPHYT_RS21360 gamma-glutamyltranspeptidase 0.82 BPHYT_RS16405 galactonate dehydratase [EC: 4.2.1.6] (from data) low > 109
Paraburkholderia bryophila 376MFSha3.1 0.36 H281DRAFT_01608 gamma-glutamyltransferase 1 Threonine peptidase. MEROPS family T03 0.82 H281DRAFT_04215 galactonate dehydratase low > 103
Paraburkholderia graminis OAS925 0.35 ABIE53_004289 gamma-glutamyltranspeptidase/glutathione hydrolase 0.82 ABIE53_003454 galactonate dehydratase low > 113
Lysobacter sp. OAE881 0.35 ABIE51_RS15105 gamma-glutamyltransferase 0.79 ABIE51_RS10935 galactonate dehydratase low > 62
Xanthomonas campestris pv. campestris strain 8004 0.35 Xcc-8004.2158.1 Gamma-glutamyltranspeptidase (EC 2.3.2.2) 0.59 Xcc-8004.3080.1 Galactonate dehydratase (EC 4.2.1.6) low > 74
Rhodanobacter sp. FW510-T8 0.31 OKGIIK_02600 ggt gamma-glutamyltransferase 0.80 OKGIIK_12510 dgoD galactonate dehydratase low > 52
Bosea sp. OAE506 0.30 ABIE41_RS10575 gamma-glutamyltransferase 0.18 ABIE41_RS08260 mandelate racemase/muconate lactonizing enzyme family protein 0.32 40
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS20010 gamma-glutamyltransferase 0.80 ABZR86_RS01215 galactonate dehydratase low > 74
Agrobacterium fabrum C58 0.28 Atu5507 gamma-glutamyltranspeptidase 0.25 Atu4196 hypothetical protein low > 89
Phaeobacter inhibens DSM 17395 0.25 PGA1_c28250 gamma-glutamyltranspeptidase Ggt 0.21 PGA1_c04540 putative d-galactonate dehydratase low > 62
Dinoroseobacter shibae DFL-12 0.25 Dshi_0675 gamma-glutamyltransferase (RefSeq) 0.15 Dshi_2447 Mandelate racemase/muconate lactonizing protein (RefSeq) low > 64
Azospirillum brasilense Sp245 0.24 AZOBR_RS03085 gamma-glutamyltransferase 0.25 AZOBR_RS25270 mandelate racemase low > 97
Hydrogenophaga sp. GW460-11-11-14-LB1 0.22 GFF3824 Gamma-glutamyltranspeptidase (EC 2.3.2.2) 0.19 GFF732 Muconate cycloisomerase (EC 5.5.1.1) low > 90
Cupriavidus basilensis FW507-4G11 0.21 RR42_RS26175 gamma-glutamyltransferase 0.24 RR42_RS34970 bifunctional D-altronate/D-mannonate dehydratase low > 128
Brevundimonas sp. GW460-12-10-14-LB2 0.19 A4249_RS14305 gamma-glutamyltransferase family protein 0.13 A4249_RS07695 L-rhamnonate dehydratase low > 48
Sphingomonas koreensis DSMZ 15582 0.18 Ga0059261_3349 Gamma-glutamyltransferase 0.24 Ga0059261_1631 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily low > 68

Not shown: 26 genomes with orthologs for HSERO_RS05455 only; 1 genomes with orthologs for HSERO_RS05150 only