Conservation of cofitness between HSERO_RS18350 and HSERO_RS03495 in Herbaspirillum seropedicae SmR1

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS18350 CoA transferase 1.0 HSERO_RS03495 NAD(P) transhydrogenase subunit beta 0.26 12
Paraburkholderia bryophila 376MFSha3.1 0.65 H281DRAFT_00835 formyl-CoA transferase 0.77 H281DRAFT_04655 NAD(P) transhydrogenase subunit beta low > 103
Burkholderia phytofirmans PsJN 0.65 BPHYT_RS09075 CoA transferase 0.76 BPHYT_RS03380 NAD(P) transhydrogenase subunit beta low > 109
Paraburkholderia graminis OAS925 0.64 ABIE53_002049 formyl-CoA transferase 0.78 ABIE53_000814 NAD(P) transhydrogenase subunit beta low > 113
Paraburkholderia sabiae LMG 24235 0.64 QEN71_RS22280 CaiB/BaiF CoA-transferase family protein 0.77 QEN71_RS26720 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta low > 153
Pseudomonas fluorescens GW456-L13 0.60 PfGW456L13_1728 L-carnitine dehydratase/bile acid-inducible protein F (EC 2.8.3.16) 0.74 PfGW456L13_2752 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) low > 87
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_3018 L-carnitine dehydratase/bile acid-inducible protein F (EC 2.8.3.16) 0.75 Pf1N1B4_1820 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) low > 87
Pseudomonas putida KT2440 0.59 PP_1475 CAIB/BAIF family protein 0.75 PP_0155 pyridine nucleotide transhydrogenase, beta subunit low > 96
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS24525 CoA transferase 0.75 PFLU_RS00545 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta low > 109
Pseudomonas sp. RS175 0.59 PFR28_00337 Succinyl-CoA--L-malate CoA-transferase beta subunit 0.75 PFR28_04723 NAD(P) transhydrogenase subunit beta low > 88
Pseudomonas fluorescens SBW25 0.59 PFLU_RS24525 CoA transferase 0.75 PFLU_RS00545 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta low > 109
Pseudomonas sp. S08-1 0.59 OH686_07010 L-carnitine dehydratase/bile acid-inducible protein F 0.71 OH686_11935 NAD(P) transhydrogenase subunit beta low > 80
Pseudomonas fluorescens FW300-N2E3 0.59 AO353_04330 CoA-transferase 0.75 AO353_11080 NAD synthetase low > 101
Dechlorosoma suillum PS 0.59 Dsui_0037 putative acyl-CoA transferase/carnitine dehydratase 0.32 Dsui_2937 NAD/NADP transhydrogenase beta subunit low > 51
Pseudomonas fluorescens FW300-N2C3 0.59 AO356_06355 CoA-transferase 0.75 AO356_10870 NAD synthetase low > 104
Pseudomonas fluorescens FW300-N2E2 0.58 Pf6N2E2_3139 L-carnitine dehydratase/bile acid-inducible protein F (EC 2.8.3.16) 0.75 Pf6N2E2_4040 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) low > 103
Pseudomonas simiae WCS417 0.58 PS417_22865 CoA-transferase 0.75 PS417_00560 NAD synthetase low > 88
Castellaniella sp019104865 MT123 0.56 ABCV34_RS08855 CoA transferase 0.78 ABCV34_RS10180 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta low > 48
Pseudomonas syringae pv. syringae B728a 0.55 Psyr_1590 L-carnitine dehydratase/bile acid-inducible protein F 0.76 Psyr_5018 NAD(P) transhydrogenase, beta subunit low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.55 Psyr_1590 L-carnitine dehydratase/bile acid-inducible protein F 0.76 Psyr_5018 NAD(P) transhydrogenase, beta subunit low > 86
Variovorax sp. OAS795 0.55 ABID97_RS19465 CoA transferase 0.74 ABID97_RS11590 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta — —
Cupriavidus basilensis FW507-4G11 0.55 RR42_RS13260 CoA-transferase 0.80 RR42_RS17505 NAD synthetase low > 128
Pseudomonas stutzeri RCH2 0.55 Psest_2660 Predicted acyl-CoA transferases/carnitine dehydratase 0.77 Psest_4205 NAD/NADP transhydrogenase beta subunit low > 67
Acidovorax sp. GW101-3H11 0.54 Ac3H11_369 CAIB/BAIF family protein 0.49 Ac3H11_662 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) low > 79
Ralstonia sp. UNC404CL21Col 0.54 ABZR87_RS10825 CaiB/BaiF CoA-transferase family protein 0.82 ABZR87_RS01355 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta low > 80
Ralstonia solanacearum GMI1000 0.53 RS_RS05995 CoA transferase 0.78 RS_RS13675 NAD(P) transhydrogenase subunit beta low > 80
Ralstonia solanacearum PSI07 0.52 RPSI07_RS18190 CoA transferase 0.80 RPSI07_RS11515 NAD synthetase low > 81
Ralstonia solanacearum UW163 0.52 UW163_RS12655 CoA transferase 0.80 UW163_RS07840 NAD(P) transhydrogenase subunit beta — —
Ralstonia solanacearum IBSBF1503 0.52 RALBFv3_RS15185 CoA transferase 0.80 RALBFv3_RS05785 NAD(P) transhydrogenase subunit beta low > 76
Caulobacter crescentus NA1000 0.44 CCNA_03677 CoA-transferase family III protein 0.51 CCNA_03412 NAD(P) transhydrogenase subunit beta PntB low > 66
Caulobacter crescentus NA1000 Δfur 0.44 CCNA_03677 CoA-transferase family III protein 0.51 CCNA_03412 NAD(P) transhydrogenase subunit beta PntB low > 67
Rhodospirillum rubrum S1H 0.36 Rru_A2550 L-carnitine dehydratase/bile acid-inducible protein F (NCBI) 0.54 Rru_A2181 NAD(P) transhydrogenase, beta subunit (NCBI) low > 58
Magnetospirillum magneticum AMB-1 0.35 AMB_RS10775 CoA transferase 0.47 AMB_RS14195 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta low > 64
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF5846 L-carnitine dehydratase/bile acid-inducible protein F (EC 2.8.3.16) 0.73 GFF2606 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) low > 90
Azospirillum brasilense Sp245 0.27 AZOBR_RS19675 CoA transferase 0.54 AZOBR_RS06435 NAD synthetase low > 97
Azospirillum sp. SherDot2 0.27 MPMX19_04918 Acetyl-CoA:oxalate CoA-transferase 0.56 MPMX19_01276 NAD(P) transhydrogenase subunit beta low > 112
Dinoroseobacter shibae DFL-12 0.25 Dshi_3330 Formyl-CoA transferase (RefSeq) 0.42 Dshi_1234 NAD(P)(+) transhydrogenase (AB-specific) (RefSeq) low > 64
Rhizobium sp. OAE497 0.25 ABIE40_RS11980 CaiB/BaiF CoA-transferase family protein 0.49 ABIE40_RS16590 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta low > 107
Acinetobacter radioresistens SK82 0.25 MPMX26_01594 Acetyl-CoA:oxalate CoA-transferase 0.51 MPMX26_00530 NAD(P) transhydrogenase subunit beta low > 36
Phaeobacter inhibens DSM 17395 0.25 PGA1_c12340 Predicted acyl-CoA transferases/carnitine dehydratase 0.44 PGA1_c10040 NAD(P) transhydrogenase subunit beta low > 62
Escherichia coli ECRC98 0.24 JDDGAC_26380 yfdE CoA:oxalate CoA-transferase 0.48 JDDGAC_02285 pntB Re/Si-specific NAD(P)(+) transhydrogenase subunit beta low > 86
Escherichia coli ECRC99 0.24 KEDOAH_05805 yfdE CoA:oxalate CoA-transferase 0.48 KEDOAH_00410 pntB Re/Si-specific NAD(P)(+) transhydrogenase subunit beta — —
Sphingomonas koreensis DSMZ 15582 0.24 Ga0059261_2807 Predicted acyl-CoA transferases/carnitine dehydratase 0.53 Ga0059261_1973 NAD/NADP transhydrogenase beta subunit low > 68
Escherichia coli ECOR38 0.24 HEPCGN_21625 yfdE CoA:oxalate CoA-transferase 0.48 HEPCGN_06070 pntB Re/Si-specific NAD(P)(+) transhydrogenase subunit beta low > 87
Escherichia coli Nissle 1917 0.24 ECOLIN_RS13645 CoA:oxalate CoA-transferase 0.48 ECOLIN_RS08950 Re/Si-specific NAD(P)(+) transhydrogenase subunit beta — —
Sinorhizobium meliloti 1021 0.24 SM_b21182 hypothetical protein 0.55 SMc03938 NAD(P) transhydrogenase subunit beta low > 103
Rhodopseudomonas palustris CGA009 0.24 TX73_000305 CaiB/BaiF CoA-transferase family protein 0.56 TX73_021670 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta — —
Agrobacterium fabrum C58 0.24 Atu2127 L-carnitine dehydratase 0.44 Atu2494 NAD(P)+ transhydrogenase beta chain low > 89
Bosea sp. OAE506 0.22 ABIE41_RS23885 CaiB/BaiF CoA-transferase family protein 0.50 ABIE41_RS09270 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta low > 77
Dickeya dianthicola ME23 0.21 DZA65_RS00105 formyl-CoA transferase 0.46 DZA65_RS11370 Re/Si-specific NAD(P)(+) transhydrogenase subunit beta low > 75
Dickeya dianthicola 67-19 0.20 HGI48_RS00090 formyl-CoA transferase 0.46 HGI48_RS10910 Re/Si-specific NAD(P)(+) transhydrogenase subunit beta low > 71
Dickeya dadantii 3937 0.20 DDA3937_RS21175 formyl-CoA transferase 0.47 DDA3937_RS10960 Re/Si-specific NAD(P)(+) transhydrogenase subunit beta low > 74
Escherichia coli ECRC101 0.20 MCAODC_12930 frc formyl-CoA transferase 0.48 MCAODC_17715 pntB Re/Si-specific NAD(P)(+) transhydrogenase subunit beta low > 87
Escherichia coli ECRC100 0.20 OKFHMN_22400 frc formyl-CoA transferase 0.48 OKFHMN_27695 pntB Re/Si-specific NAD(P)(+) transhydrogenase subunit beta low > 80
Escherichia coli ECRC102 0.20 NIAGMN_20175 frc formyl-CoA transferase 0.48 NIAGMN_00380 pntB Re/Si-specific NAD(P)(+) transhydrogenase subunit beta — —
Dyella japonica UNC79MFTsu3.2 0.17 ABZR86_RS14460 CoA transferase 0.34 ABZR86_RS22120 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta 0.34 48
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.15 GFF208 Crotonobetainyl-CoA:carnitine CoA-transferase (EC 2.8.3.-) 0.47 GFF1795 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) low > 78
Shewanella loihica PV-4 0.15 Shew_2674 crotonobetainyl-CoA:carnitine CoA-transferase (RefSeq) 0.41 Shew_0662 NAD(P) transhydrogenase, beta subunit (RefSeq) low > 60

Not shown: 2 genomes with orthologs for HSERO_RS18350 only; 27 genomes with orthologs for HSERO_RS03495 only