Conservation of cofitness between HSERO_RS01325 and HSERO_RS02350 in Herbaspirillum seropedicae SmR1

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS01325 cation/multidrug efflux protein 1.0 HSERO_RS02350 diadenosine tetraphosphatase 0.38 10
Paraburkholderia bryophila 376MFSha3.1 0.73 H281DRAFT_05197 Multidrug efflux pump subunit AcrB 0.53 H281DRAFT_04820 Bis(5'nucleosyl)-tetraphosphatase, ApaH low > 103
Paraburkholderia graminis OAS925 0.72 ABIE53_002354 multidrug efflux pump 0.52 ABIE53_001135 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) low > 113
Paraburkholderia sabiae LMG 24235 0.71 QEN71_RS07190 efflux RND transporter permease subunit 0.54 QEN71_RS25765 symmetrical bis(5'-nucleosyl)-tetraphosphatase low > 153
Burkholderia phytofirmans PsJN 0.71 BPHYT_RS11375 acriflavin resistance protein 0.55 BPHYT_RS04255 diadenosine tetraphosphatase low > 109
Dyella japonica UNC79MFTsu3.2 0.67 ABZR86_RS11125 efflux RND transporter permease subunit 0.36 ABZR86_RS11280 symmetrical bis(5'-nucleosyl)-tetraphosphatase low > 74
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS06185 efflux RND transporter permease subunit 0.43 PFLU_RS27475 symmetrical bis(5'-nucleosyl)-tetraphosphatase low > 109
Pseudomonas fluorescens SBW25 0.50 PFLU_RS06185 efflux RND transporter permease subunit 0.43 PFLU_RS27475 symmetrical bis(5'-nucleosyl)-tetraphosphatase low > 109
Pseudomonas stutzeri RCH2 0.50 Psest_1566 Cation/multidrug efflux pump 0.46 Psest_3670 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) low > 67
Pseudomonas simiae WCS417 0.50 PS417_06115 multidrug transporter AcrB 0.43 PS417_25820 diadenosine tetraphosphatase
Pseudomonas fluorescens FW300-N2E3 0.50 AO353_16365 multidrug transporter AcrB 0.43 AO353_07325 diadenosine tetraphosphatase low > 101
Pseudomonas fluorescens GW456-L13 0.50 PfGW456L13_4730 RND efflux transporter 0.42 PfGW456L13_1198 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) low > 87
Pseudomonas sp. S08-1 0.49 OH686_06740 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) 0.44 OH686_15030 bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
Dechlorosoma suillum PS 0.49 Dsui_0408 cation/multidrug efflux pump 0.51 Dsui_0399 symmetrical bis(5'-nucleosyl)-tetraphosphatase 0.69 23
Pseudomonas fluorescens FW300-N1B4 0.49 Pf1N1B4_3063 RND efflux transporter 0.44 Pf1N1B4_2526 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) low > 87
Pseudomonas fluorescens FW300-N2E2 0.49 Pf6N2E2_3091 RND efflux transporter 0.42 Pf6N2E2_4803 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) low > 103
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_06130 multidrug transporter AcrB 0.42 AO356_14325 diadenosine tetraphosphatase
Pseudomonas putida KT2440 0.49 PP_1517 RND efflux transporter 0.43 PP_0399 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical
Acinetobacter radioresistens SK82 0.49 MPMX26_03010 Cobalt-zinc-cadmium resistance protein CzcA 0.38 MPMX26_00597 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical low > 36
Pseudomonas sp. RS175 0.49 PFR28_00379 Cobalt-zinc-cadmium resistance protein CzcA 0.42 PFR28_04066 'Bis(5'-nucleosyl)-tetraphosphatase, symmetrical' transl_table=11
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS01385 AcrB/AcrD/AcrF family protein 0.54 RALBFv3_RS12640 symmetrical bis(5'-nucleosyl)-tetraphosphatase
Ralstonia solanacearum UW163 0.46 UW163_RS14695 AcrB/AcrD/AcrF family protein 0.54 UW163_RS00925 symmetrical bis(5'-nucleosyl)-tetraphosphatase
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS13180 efflux RND transporter permease subunit 0.54 ABZR87_RS08640 symmetrical bis(5'-nucleosyl)-tetraphosphatase low > 80
Ralstonia solanacearum PSI07 0.46 RPSI07_RS16100 AcrB/AcrD/AcrF family protein 0.53 RPSI07_RS20620 symmetrical bis(5'-nucleosyl)-tetraphosphatase
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS07915 multidrug transporter AcrB 0.62 RR42_RS15845 biotin transporter BioY low > 128
Ralstonia solanacearum GMI1000 0.46 RS_RS08335 AcrB/AcrD/AcrF family protein 0.54 RS_RS03425 bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
Acidovorax sp. GW101-3H11 0.43 Ac3H11_933 Probable transmembrane drug efflux protein 0.50 Ac3H11_1136 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) low > 79
Variovorax sp. SCN45 0.43 GFF493 RND efflux system, inner membrane transporter 0.53 GFF1936 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) low > 127
Variovorax sp. OAS795 0.43 ABID97_RS17615 efflux RND transporter permease subunit 0.52 ABID97_RS21950 symmetrical bis(5'-nucleosyl)-tetraphosphatase low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF4033 Probable transmembrane drug efflux protein 0.53 GFF223 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) low > 90
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_0346 Acriflavin resistance protein 0.43 Psyr_4629 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_0346 Acriflavin resistance protein 0.43 Psyr_4629 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
Pectobacterium carotovorum WPP14 0.38 HER17_RS07500 efflux RND transporter permease subunit 0.41 HER17_RS02950 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH low > 75
Dickeya dianthicola ME23 0.38 DZA65_RS08250 efflux RND transporter permease subunit 0.39 DZA65_RS19350 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) low > 75
Rahnella sp. WP5 0.38 EX31_RS17700 efflux RND transporter permease subunit 0.38 EX31_RS03790 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) low > 89
Dickeya dadantii 3937 0.37 DDA3937_RS04730 efflux RND transporter permease subunit 0.40 DDA3937_RS18275 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH low > 74
Dickeya dianthicola 67-19 0.35 HGI48_RS07915 efflux RND transporter permease subunit 0.39 HGI48_RS18210 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH low > 71
Klebsiella michiganensis M5al 0.35 BWI76_RS05720 cation/multidrug efflux pump 0.42 BWI76_RS04510 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) low > 92
Enterobacter sp. TBS_079 0.35 MPMX20_02160 Nickel and cobalt resistance protein CnrA 0.42 MPMX20_00745 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical low > 85
Pantoea sp. MT58 0.35 IAI47_21725 efflux RND transporter permease subunit 0.38 IAI47_16095 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH low > 76
Xanthomonas campestris pv. campestris strain 8004 0.35 Xcc-8004.557.1 cation efflux system protein 0.35 Xcc-8004.4275.1 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) low > 74
Enterobacter asburiae PDN3 0.35 EX28DRAFT_1393 Cation/multidrug efflux pump 0.43 EX28DRAFT_3643 Bis(5'nucleosyl)-tetraphosphatase, ApaH low > 76
Marinobacter adhaerens HP15 0.33 HP15_1118 transporter, AcrB/D/F family 0.43 HP15_3277 diadenosine tetraphosphatase low > 73
Vibrio cholerae E7946 ATCC 55056 0.27 CSW01_08410 AcrB/AcrD/AcrF family protein 0.44 CSW01_02315 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) low > 62
Shewanella sp. ANA-3 0.26 Shewana3_3849 acriflavin resistance protein (RefSeq) 0.32 Shewana3_3211 apaH diadenosine tetraphosphatase (RefSeq) low > 73
Shewanella loihica PV-4 0.25 Shew_0466 acriflavin resistance protein (RefSeq) 0.34 Shew_0877 apaH diadenosine tetraphosphatase (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.25 MIT1002_01561 Swarming motility protein SwrC 0.41 MIT1002_00779 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical low > 70
Shewanella amazonensis SB2B 0.25 Sama_0675 AcrB/AcrD/AcrF family transporter (RefSeq) 0.34 Sama_2821 apaH diadenosine tetraphosphatase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.15 SO3279 AcrB/AcrD/AcrF family protein (NCBI ptt file) 0.32 SO3641 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) (NCBI ptt file) low > 76

Not shown: 20 genomes with orthologs for HSERO_RS01325 only; 21 genomes with orthologs for HSERO_RS02350 only