Conservation of cofitness between HSERO_RS06315 and HSERO_RS02260 in Herbaspirillum seropedicae SmR1

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS06315 phosphate ABC transporter permease 1.0 HSERO_RS02260 DNA polymerase I 0.38 18
Hydrogenophaga sp. GW460-11-11-14-LB1 0.63 GFF4231 Phosphate transport system permease protein PstC (TC 3.A.1.7.1) 0.59 GFF5584 DNA polymerase I (EC 2.7.7.7) 0.41 34
Acidovorax sp. GW101-3H11 0.61 Ac3H11_457 Phosphate transport system permease protein PstC (TC 3.A.1.7.1) 0.60 Ac3H11_1648 DNA polymerase I (EC 2.7.7.7) — —
Ralstonia solanacearum GMI1000 0.59 RS_RS07675 phosphate ABC transporter permease subunit PstC 0.71 RS_RS11195 DNA polymerase I low > 80
Ralstonia solanacearum PSI07 0.58 RPSI07_RS15300 phosphate ABC transporter permease subunit PstC 0.71 RPSI07_RS13480 DNA polymerase I low > 81
Ralstonia solanacearum IBSBF1503 0.58 RALBFv3_RS02145 phosphate transporter permease subunit PstC 0.70 RALBFv3_RS03750 DNA polymerase I — —
Ralstonia solanacearum UW163 0.58 UW163_RS15455 phosphate transporter permease subunit PstC 0.70 UW163_RS09920 DNA polymerase I — —
Pantoea sp. MT58 0.57 IAI47_00230 phosphate ABC transporter permease PstC 0.52 IAI47_00430 DNA polymerase I low > 76
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_04412 phosphate ABC transporter membrane protein 1, PhoT family 0.68 H281DRAFT_06022 DNA polymerase I low > 103
Cupriavidus basilensis FW507-4G11 0.57 RR42_RS13465 phosphate transporter permease subunit PstC 0.71 RR42_RS15050 DNA polymerase I low > 128
Paraburkholderia sabiae LMG 24235 0.57 QEN71_RS04825 phosphate ABC transporter permease PstC 0.69 QEN71_RS17885 DNA polymerase I — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF1735 Phosphate transport system permease protein PstC (TC 3.A.1.7.1) 0.51 GFF2216 DNA polymerase I (EC 2.7.7.7) low > 78
Paraburkholderia graminis OAS925 0.57 ABIE53_002994 phosphate transport system permease protein 0.68 ABIE53_004852 DNA polymerase-1 low > 113
Escherichia coli BL21 0.57 ECD_03611 phosphate ABC transporter permease 0.52 ECD_03749 5 — —
Escherichia coli ECOR38 0.57 HEPCGN_13595 pstC phosphate ABC transporter permease PstC 0.52 HEPCGN_12785 polA DNA polymerase I — —
Escherichia coli Nissle 1917 0.57 ECOLIN_RS21445 phosphate ABC transporter permease PstC 0.52 ECOLIN_RS22270 DNA polymerase I — —
Escherichia coli ECRC100 0.57 OKFHMN_14885 pstC phosphate ABC transporter permease PstC 0.52 OKFHMN_14150 polA DNA polymerase I — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_04326 Phosphate transport system permease protein PstC 0.51 OHPLBJKB_04189 DNA polymerase I — —
Escherichia coli BW25113 0.57 b3727 pstC phosphate transporter subunit (NCBI) 0.52 b3863 polA DNA polymerase I (NCBI) low > 76
Escherichia fergusonii Becca 0.57 EFB2_04906 Phosphate transport system permease protein PstC 0.52 EFB2_04753 DNA polymerase I — —
Escherichia coli ECRC102 0.57 NIAGMN_12640 pstC phosphate ABC transporter permease PstC 0.52 NIAGMN_11905 polA DNA polymerase I — —
Escherichia coli ECRC62 0.57 BNILDI_04510 pstC phosphate ABC transporter permease PstC 0.51 BNILDI_05250 polA DNA polymerase I — —
Escherichia coli ECRC98 0.57 JDDGAC_18505 pstC phosphate ABC transporter permease PstC 0.52 JDDGAC_17775 polA DNA polymerase I — —
Escherichia coli ECOR27 0.57 NOLOHH_07015 pstC phosphate ABC transporter permease PstC 0.52 NOLOHH_06280 polA DNA polymerase I — —
Escherichia coli ECRC99 0.57 KEDOAH_13265 pstC phosphate ABC transporter permease PstC 0.52 KEDOAH_14000 polA DNA polymerase I — —
Escherichia coli ECRC101 0.57 MCAODC_05390 pstC phosphate ABC transporter permease PstC 0.52 MCAODC_04650 polA DNA polymerase I — —
Klebsiella michiganensis M5al 0.56 BWI76_RS00155 phosphate transporter permease subunit PstC 0.51 BWI76_RS00355 DNA polymerase I — —
Azospirillum sp. SherDot2 0.56 MPMX19_06033 Phosphate transport system permease protein PstC 0.36 MPMX19_04869 DNA polymerase I low > 112
Rahnella sp. WP5 0.56 EX31_RS06065 phosphate ABC transporter permease PstC 0.52 EX31_RS15905 DNA polymerase I low > 89
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS14140 phosphate transporter permease subunit PstC 0.68 BPHYT_RS33610 DNA polymerase I low > 109
Variovorax sp. SCN45 0.55 GFF1093 Phosphate ABC transporter, permease protein PstC (TC 3.A.1.7.1) 0.62 GFF4006 DNA polymerase I (EC 2.7.7.7) low > 127
Ralstonia sp. UNC404CL21Col 0.55 ABZR87_RS14095 phosphate ABC transporter permease PstC 0.70 ABZR87_RS15680 DNA polymerase I low > 80
Variovorax sp. OAS795 0.55 ABID97_RS14600 phosphate ABC transporter permease subunit PstC 0.62 ABID97_RS09180 DNA polymerase I low > 91
Erwinia tracheiphila SCR3 0.53 LU632_RS24885 pstC phosphate ABC transporter permease PstC 0.51 LU632_RS23870 polA DNA polymerase I — —
Enterobacter asburiae PDN3 0.53 EX28DRAFT_4003 phosphate ABC transporter, permease protein PstC 0.51 EX28DRAFT_4343 DNA polymerase I (EC 2.7.7.7) — —
Enterobacter sp. TBS_079 0.53 MPMX20_04640 Phosphate transport system permease protein PstC 0.51 MPMX20_04601 DNA polymerase I low > 85
Rhizobium sp. OAE497 0.53 ABIE40_RS07060 phosphate ABC transporter permease subunit PstC 0.37 ABIE40_RS00490 DNA polymerase I low > 107
Serratia liquefaciens MT49 0.53 IAI46_25180 phosphate ABC transporter permease PstC 0.53 IAI46_24985 DNA polymerase I low > 86
Pectobacterium carotovorum WPP14 0.52 HER17_RS21680 phosphate ABC transporter permease PstC 0.51 HER17_RS21470 DNA polymerase I — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.52 Psyr_3105 phosphate ABC transporter membrane protein 1, PhoT family 0.50 Psyr_0270 DNA polymerase I low > 86
Pseudomonas syringae pv. syringae B728a 0.52 Psyr_3105 phosphate ABC transporter membrane protein 1, PhoT family 0.50 Psyr_0270 DNA polymerase I low > 86
Dickeya dianthicola 67-19 0.50 HGI48_RS21565 phosphate ABC transporter permease PstC 0.51 HGI48_RS21260 DNA polymerase I — —
Dickeya dadantii 3937 0.50 DDA3937_RS21465 phosphate ABC transporter permease PstC 0.51 DDA3937_RS00105 DNA polymerase I — —
Dickeya dianthicola ME23 0.50 DZA65_RS22545 phosphate ABC transporter permease PstC 0.50 DZA65_RS22235 DNA polymerase I — —
Castellaniella sp019104865 MT123 0.50 ABCV34_RS15590 phosphate ABC transporter permease subunit PstC 0.58 ABCV34_RS02195 DNA polymerase I — —
Xanthomonas campestris pv. campestris strain 8004 0.48 Xcc-8004.3361.1 Phosphate transport system permease protein PstC (TC 3.A.1.7.1) 0.52 Xcc-8004.5105.1 DNA polymerase I (EC 2.7.7.7) — —
Lysobacter sp. OAE881 0.48 ABIE51_RS07540 phosphate ABC transporter permease subunit PstC 0.52 ABIE51_RS02010 DNA polymerase I low > 62
Rhodanobacter denitrificans MT42 0.47 LRK55_RS00200 phosphate ABC transporter permease subunit PstC 0.54 LRK55_RS06585 DNA polymerase I — —
Rhodanobacter denitrificans FW104-10B01 0.47 LRK54_RS00460 phosphate ABC transporter permease subunit PstC 0.54 LRK54_RS06840 DNA polymerase I — —
Rhodanobacter sp. FW510-T8 0.46 OKGIIK_06850 pstC phosphate ABC transporter permease subunit PstC 0.54 OKGIIK_16785 polA DNA polymerase I — —
Dyella japonica UNC79MFTsu3.2 0.46 ABZR86_RS08235 phosphate ABC transporter permease subunit PstC 0.55 ABZR86_RS17015 DNA polymerase I — —
Bosea sp. OAE506 0.46 ABIE41_RS08890 phosphate ABC transporter permease subunit PstC 0.34 ABIE41_RS03570 DNA polymerase I low > 77
Rhodopseudomonas palustris CGA009 0.42 TX73_024840 phosphate ABC transporter permease subunit PstC 0.34 TX73_024545 DNA polymerase I low > 86
Mycobacterium tuberculosis H37Rv 0.30 Rv0929 Phosphate-transport integral membrane ABC transporter PstC2 0.18 Rv1629 Probable DNA polymerase I PolA — —
Pseudomonas fluorescens FW300-N2C3 0.25 AO356_26695 phosphate ABC transporter permease 0.50 AO356_11465 DNA polymerase I low > 104
Pseudomonas putida KT2440 0.25 PP_2657 phosphate ABC transporter 0.52 PP_0123 DNA polymerase I, 5 low > 96
Pseudomonas fluorescens SBW25 0.25 PFLU_RS16165 phosphate ABC transporter permease subunit PstC 0.50 PFLU_RS00395 DNA polymerase I low > 109
Pseudomonas fluorescens SBW25-INTG 0.25 PFLU_RS16165 phosphate ABC transporter permease subunit PstC 0.50 PFLU_RS00395 DNA polymerase I low > 109
Pseudomonas simiae WCS417 0.25 PS417_14265 phosphate ABC transporter permease 0.51 PS417_00405 DNA polymerase I low > 88
Vibrio cholerae E7946 ATCC 55056 0.20 CSW01_14375 phosphate ABC transporter permease subunit PstC 0.53 CSW01_00560 DNA polymerase I low > 62
Synechococcus elongatus PCC 7942 0.20 Synpcc7942_2443 pstC Phosphate ABC transporter, permease protein PstC 0.29 Synpcc7942_0194 polA DNA polymerase I — —
Sinorhizobium meliloti 1021 0.19 SMc02144 phosphate ABC transporter permease 0.36 SMc02850 DNA polymerase I 0.61 12
Shewanella oneidensis MR-1 0.19 SO4291 pstC phosphate ABC transporter, permease protein (NCBI ptt file) 0.52 SO4669 polA DNA polymerase I (NCBI ptt file) — —

Not shown: 3 genomes with orthologs for HSERO_RS06315 only; 37 genomes with orthologs for HSERO_RS02260 only