| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Herbaspirillum seropedicae SmR1 | 1.0 | HSERO_RS01565 | | hemolysin secretion protein D | 1.0 | HSERO_RS02135 | | phosphomethylpyrimidine kinase | 0.26 | 16 |
| Burkholderia phytofirmans PsJN | 0.57 | BPHYT_RS22510 | | MexE family multidrug efflux RND transporter periplasmic adaptor subunit | 0.17 | BPHYT_RS12250 | | phosphomethylpyrimidine kinase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.56 | ABZR87_RS19405 | | efflux RND transporter periplasmic adaptor subunit | 0.19 | ABZR87_RS04830 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | — | — |
| Ralstonia solanacearum PSI07 | 0.54 | RPSI07_RS05170 | | efflux RND transporter periplasmic adaptor subunit | 0.19 | RPSI07_RS23455 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | — | — |
| Azospirillum sp. SherDot2 | 0.52 | MPMX19_02967 | | Efflux pump periplasmic linker BepF | 0.19 | MPMX19_06182 | | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.50 | RR42_RS27680 | | MexE family multidrug efflux RND transporter periplasmic adaptor subunit | 0.15 | RR42_RS01370 | | phosphomethylpyrimidine kinase | — | — |
| Variovorax sp. OAS795 | 0.45 | ABID97_RS17355 | | efflux RND transporter periplasmic adaptor subunit | 0.18 | ABID97_RS15330 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | — | — |
| Acidovorax sp. GW101-3H11 | 0.44 | Ac3H11_259 | | Probable Co/Zn/Cd efflux system membrane fusion protein | 0.21 | Ac3H11_1063 | | Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.43 | Psyr_2967 | | Secretion protein HlyD | 0.28 | Psyr_4340 | | phosphomethylpyrimidine kinase, putative | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.43 | Psyr_2967 | | Secretion protein HlyD | 0.28 | Psyr_4340 | | phosphomethylpyrimidine kinase, putative | low | > 86 |
| Pseudomonas fluorescens FW300-N2E2 | 0.43 | Pf6N2E2_947 | | Multidrug efflux membrane fusion protein MexE | 0.23 | Pf6N2E2_5024 | | Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) | low | > 103 |
| Pseudomonas sp. RS175 | 0.43 | PFR28_02012 | | Multidrug resistance protein MdtA | 0.26 | PFR28_03843 | | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | low | > 88 |
| Pseudomonas fluorescens GW456-L13 | 0.42 | PfGW456L13_3061 | | Multidrug efflux membrane fusion protein MexE | 0.28 | PfGW456L13_1385 | | Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) | low | > 87 |
| Rhodopseudomonas palustris CGA009 | 0.42 | TX73_015640 | | efflux RND transporter periplasmic adaptor subunit | 0.17 | TX73_020570 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.42 | Pf1N1B4_4865 | | Multidrug efflux membrane fusion protein MexE | 0.23 | Pf1N1B4_2718 | | Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.41 | AO353_23965 | | RND transporter MFP subunit | 0.28 | AO353_06350 | | hydrogenase | low | > 101 |
| Pseudomonas putida KT2440 | 0.41 | PP_3425 | | Efflux transporter RND family, MFP subunit | 0.29 | PP_4782 | | Phosphomethylpyrimidine kinase | low | > 96 |
| Rhizobium sp. OAE497 | 0.41 | ABIE40_RS14880 | | efflux RND transporter periplasmic adaptor subunit | 0.22 | ABIE40_RS25930 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | low | > 107 |
| Agrobacterium fabrum C58 | 0.40 | Atu2482 | | HlyD family secretion protein | 0.21 | Atu3290 | | phosphomethylpyrimidine kinase | low | > 89 |
| Pseudomonas stutzeri RCH2 | 0.40 | Psest_2145 | | RND family efflux transporter, MFP subunit | 0.27 | Psest_0537 | | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | low | > 67 |
| Pseudomonas fluorescens SBW25-INTG | 0.40 | PFLU_RS14265 | | efflux RND transporter periplasmic adaptor subunit | 0.29 | PFLU_RS26530 | | hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.40 | PFLU_RS14265 | | efflux RND transporter periplasmic adaptor subunit | 0.29 | PFLU_RS26530 | | hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | low | > 109 |
| Pseudomonas fluorescens FW300-N2C3 | 0.39 | AO356_27600 | | RND transporter MFP subunit | 0.28 | AO356_15435 | | hydrogenase | low | > 104 |
| Pseudomonas simiae WCS417 | 0.39 | PS417_13195 | | RND transporter MFP subunit | 0.29 | PS417_24600 | | hydrogenase | low | > 88 |
| Pseudomonas sp. S08-1 | 0.38 | OH686_01010 | | Multidrug efflux system, membrane fusion component | 0.27 | OH686_09185 | | Hydroxymethylpyrimidine phosphate kinase ThiD | low | > 80 |
| Dyella japonica UNC79MFTsu3.2 | 0.37 | ABZR86_RS15405 | | efflux RND transporter periplasmic adaptor subunit | 0.22 | ABZR86_RS00760 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | — | — |
| Sinorhizobium meliloti 1021 | 0.37 | SMc01094 | | multidrug efflux system transmembrane protein | 0.21 | SM_b20962 | | phoshomethylpyrimidine kinase | low | > 103 |
| Pantoea sp. MT58 | 0.37 | IAI47_10305 | | efflux RND transporter periplasmic adaptor subunit | 0.19 | IAI47_06810 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | low | > 76 |
| Enterobacter asburiae PDN3 | 0.37 | EX28DRAFT_1473 | | RND family efflux transporter, MFP subunit | 0.18 | EX28DRAFT_0469 | | hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | low | > 76 |
| Serratia liquefaciens MT49 | 0.36 | IAI46_09930 | | efflux RND transporter periplasmic adaptor subunit | 0.20 | IAI46_19100 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | low | > 86 |
| Rhodospirillum rubrum S1H | 0.36 | Rru_A0887 | | Secretion protein HlyD (NCBI) | 0.23 | Rru_A1102 | | Phosphomethylpyrimidine kinase (NCBI) | — | — |
| Enterobacter sp. TBS_079 | 0.36 | MPMX20_01154 | | Multidrug resistance protein MdtE | 0.19 | MPMX20_03076 | | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | low | > 85 |
| Klebsiella michiganensis M5al | 0.36 | BWI76_RS12950 | | acriflavin resistance protein AcrA | 0.18 | BWI76_RS19375 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | low | > 92 |
| Rahnella sp. WP5 | 0.36 | EX31_RS01490 | | efflux RND transporter periplasmic adaptor subunit | 0.20 | EX31_RS20390 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | low | > 89 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.36 | Xcc-8004.3478.1 | | RND efflux system, membrane fusion protein CmeA | 0.18 | Xcc-8004.3091.1 | | hypothetical protein | low | > 74 |
| Magnetospirillum magneticum AMB-1 | 0.35 | AMB_RS09485 | | efflux RND transporter periplasmic adaptor subunit | 0.17 | AMB_RS16155 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | — | — |
| Rhodanobacter sp. FW510-T8 | 0.34 | OKGIIK_14950 | | Efflux RND transporter periplasmic adaptor subunit | 0.19 | OKGIIK_03835 | | Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | low | > 52 |
| Lysobacter sp. OAE881 | 0.34 | ABIE51_RS01055 | | efflux RND transporter periplasmic adaptor subunit | 0.19 | ABIE51_RS07970 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.32 | DVU3247 | | efflux transporter, RND family, MFP subunit (TIGR) | 0.20 | DVU0931 | thiD | phosphomethylpyrimidine kinase (TIGR) | — | — |
| Azospirillum brasilense Sp245 | 0.31 | AZOBR_RS16480 | | hemolysin secretion protein D | 0.17 | AZOBR_RS07045 | | phosphomethylpyrimidine kinase | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.31 | A4249_RS09930 | | efflux RND transporter periplasmic adaptor subunit | 0.17 | A4249_RS15985 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.30 | DvMF_0035 | | efflux transporter, RND family, MFP subunit (RefSeq) | 0.22 | DvMF_1376 | | phosphomethylpyrimidine kinase (RefSeq) | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.29 | Ga0059261_1851 | | RND family efflux transporter, MFP subunit | 0.18 | Ga0059261_1961 | | hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.29 | GFF4247 | | RND efflux system, membrane fusion protein CmeA | 0.18 | GFF3834 | | Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) | low | > 78 |
| Bosea sp. OAE506 | 0.28 | ABIE41_RS17115 | | efflux RND transporter periplasmic adaptor subunit | 0.20 | ABIE41_RS21620 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | — | — |
| Phocaeicola vulgatus CL09T03C04 | 0.23 | HMPREF1058_RS02445 | | efflux RND transporter periplasmic adaptor subunit | 0.25 | HMPREF1058_RS06820 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | low | > 67 |
| Phocaeicola dorei CL03T12C01 | 0.22 | ABI39_RS01695 | | efflux RND transporter periplasmic adaptor subunit | 0.24 | ABI39_RS20615 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | low | > 72 |
| Parabacteroides merdae CL09T00C40 | 0.21 | HMPREF1078_RS07685 | | efflux RND transporter periplasmic adaptor subunit | 0.22 | HMPREF1078_RS03470 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | low | > 61 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.21 | BT0885 | | putative cation efflux pump (NCBI ptt file) | 0.25 | BT0790 | | phosphomethylpyrimidine kinase (NCBI ptt file) | low | > 81 |
Not shown: 9 genomes with orthologs for HSERO_RS01565 only; 39 genomes with orthologs for HSERO_RS02135 only