Conservation of cofitness between HER17_RS02805 and HER17_RS21475 in Pectobacterium carotovorum WPP14

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02805 threonine synthase 1.0 HER17_RS21475 thiol:disulfide interchange protein DsbA 0.93 18
Dickeya dadantii 3937 0.88 DDA3937_RS18405 threonine synthase 0.85 DDA3937_RS00100 thiol:disulfide interchange protein DsbA low > 74
Dickeya dianthicola ME23 0.87 DZA65_RS19475 threonine synthase 0.84 DZA65_RS22240 thiol:disulfide interchange protein DsbA low > 75
Dickeya dianthicola 67-19 0.87 HGI48_RS18335 threonine synthase 0.84 HGI48_RS21265 thiol:disulfide interchange protein DsbA low > 71
Rahnella sp. WP5 0.86 EX31_RS03935 threonine synthase 0.78 EX31_RS15910 thiol:disulfide interchange protein DsbA low > 89
Serratia liquefaciens MT49 0.86 IAI46_03040 threonine synthase 0.86 IAI46_24995 thiol:disulfide interchange protein DsbA low > 86
Pantoea sp. MT58 0.83 IAI47_16205 threonine synthase 0.72 IAI47_00425 thiol:disulfide interchange protein DsbA — —
Erwinia tracheiphila SCR3 0.82 LU632_RS02620 thrC threonine synthase 0.72 LU632_RS23875 dsbA thiol:disulfide interchange protein DsbA — —
Enterobacter asburiae PDN3 0.82 EX28DRAFT_3616 threonine synthase 0.79 EX28DRAFT_4341 Protein-disulfide isomerase low > 76
Enterobacter sp. TBS_079 0.82 MPMX20_00712 Threonine synthase 0.78 MPMX20_04603 Thiol:disulfide interchange protein DsbA — —
Klebsiella michiganensis M5al 0.81 BWI76_RS04255 threonine synthase 0.76 BWI76_RS00345 protein disulfide oxidoreductase DsbA low > 92
Escherichia coli ECRC98 0.79 JDDGAC_14695 thrC threonine synthase 0.72 JDDGAC_17795 dsbA thiol:disulfide interchange protein DsbA low > 86
Escherichia coli ECOR27 0.79 NOLOHH_03430 thrC threonine synthase 0.72 NOLOHH_06300 dsbA thiol:disulfide interchange protein DsbA low > 75
Escherichia coli ECRC101 0.79 MCAODC_01615 thrC threonine synthase 0.72 MCAODC_04670 dsbA thiol:disulfide interchange protein DsbA — —
Escherichia coli ECRC99 0.79 KEDOAH_17055 thrC threonine synthase 0.72 KEDOAH_13980 dsbA thiol:disulfide interchange protein DsbA — —
Escherichia coli ECRC100 0.79 OKFHMN_11100 thrC threonine synthase 0.72 OKFHMN_14170 dsbA thiol:disulfide interchange protein DsbA low > 80
Escherichia fergusonii Becca 0.79 EFB2_04039 Threonine synthase 0.72 EFB2_04757 Thiol:disulfide interchange protein DsbA low > 86
Escherichia coli BL21 0.79 ECD_00004 L-threonine synthase 0.72 ECD_03746 periplasmic protein disulfide isomerase I low > 61
Escherichia coli ECOR38 0.79 HEPCGN_09105 thrC threonine synthase 0.72 HEPCGN_12805 dsbA thiol:disulfide interchange protein DsbA low > 87
Escherichia coli ECRC62 0.79 BNILDI_08170 thrC threonine synthase 0.72 BNILDI_05230 dsbA thiol:disulfide interchange protein DsbA low > 75
Escherichia coli ECRC102 0.79 NIAGMN_08950 thrC threonine synthase 0.72 NIAGMN_11925 dsbA thiol:disulfide interchange protein DsbA — —
Escherichia coli BW25113 0.79 b0004 thrC threonine synthase (NCBI) 0.72 b3860 dsbA periplasmic protein disulfide isomerase I (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_03656 Threonine synthase 0.72 OHPLBJKB_04193 Thiol:disulfide interchange protein DsbA low > 73
Escherichia coli Nissle 1917 0.79 ECOLIN_RS00020 threonine synthase 0.72 ECOLIN_RS22250 thiol:disulfide interchange protein DsbA low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.79 GFF1080 Threonine synthase (EC 4.2.3.1) 0.78 GFF2213 Periplasmic thiol:disulfide interchange protein DsbA low > 78
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_11965 threonine synthase 0.36 CSW01_00170 thiol:disulfide interchange protein DsbA low > 62
Alteromonas macleodii MIT1002 0.62 MIT1002_03084 Threonine synthase 0.27 MIT1002_00714 Thiol:disulfide interchange protein DsbA precursor — —
Shewanella loihica PV-4 0.58 Shew_1081 threonine synthase (RefSeq) 0.33 Shew_0265 DSBA oxidoreductase (RefSeq) low > 60
Shewanella sp. ANA-3 0.55 Shewana3_1141 threonine synthase (RefSeq) 0.32 Shewana3_3838 DSBA oxidoreductase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.55 SO3413 thrC threonine synthase (NCBI ptt file) 0.31 SO0333 dsbA thiol:disulfide interchange protein DsbA (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.55 Sama_0907 threonine synthase (RefSeq) 0.31 Sama_3321 thiol:disulfide interchange protein DsbA (RefSeq) low > 62
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.2954.1 Threonine synthase (EC 4.2.3.1) 0.16 Xcc-8004.969.1 Periplasmic thiol:disulfide interchange protein DsbA low > 74
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_3142 Threonine synthase (EC 4.2.3.1) 0.19 Pf6N2E2_4158 Periplasmic thiol:disulfide interchange protein DsbA — —
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_04350 threonine synthase 0.21 AO353_10950 thiol:disulfide interchange protein — —
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_06370 threonine synthase 0.18 AO356_11445 thiol:disulfide interchange protein — —
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_3014 Threonine synthase (EC 4.2.3.1) 0.19 Pf1N1B4_1879 Periplasmic thiol:disulfide interchange protein DsbA — —
Pseudomonas sp. S08-1 0.28 OH686_17765 threonine synthase 0.23 OH686_12195 Periplasmic thiol:disulfide interchange protein DsbA low > 80
Pseudomonas simiae WCS417 0.28 PS417_22880 threonine synthase 0.21 PS417_00425 thiol:disulfide interchange protein — —
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS24545 threonine synthase 0.21 PFLU_RS00415 thiol:disulfide interchange protein DsbA/DsbL — —
Pseudomonas fluorescens SBW25 0.27 PFLU_RS24545 threonine synthase 0.21 PFLU_RS00415 thiol:disulfide interchange protein DsbA/DsbL low > 109
Pseudomonas stutzeri RCH2 0.27 Psest_3125 threonine synthase 0.19 Psest_0186 Protein-disulfide isomerase — —
Marinobacter adhaerens HP15 0.25 HP15_765 threonine synthase 0.19 HP15_3325 DSBA oxidoreductase — —
Castellaniella sp019104865 MT123 0.24 ABCV34_RS02300 threonine synthase 0.14 ABCV34_RS12390 thiol:disulfide interchange protein DsbA/DsbL — —
Dechlorosoma suillum PS 0.23 Dsui_2904 threonine synthase 0.15 Dsui_0675 putative dithiol-disulfide isomerase involved in polyketide biosynthesis — —
Variovorax sp. OAS795 0.22 ABID97_RS25760 threonine synthase 0.15 ABID97_RS04765 thiol:disulfide interchange protein DsbA/DsbL — —
Ralstonia sp. UNC404CL21Col 0.22 ABZR87_RS05865 threonine synthase 0.14 ABZR87_RS06350 thiol:disulfide interchange protein DsbA/DsbL low > 80
Paraburkholderia sabiae LMG 24235 0.22 QEN71_RS22400 threonine synthase 0.18 QEN71_RS01165 thiol:disulfide interchange protein DsbA/DsbL low > 153
Variovorax sp. SCN45 0.21 GFF2800 Threonine synthase (EC 4.2.3.1) 0.15 GFF6293 Periplasmic thiol:disulfide interchange protein DsbA — —
Herbaspirillum seropedicae SmR1 0.21 HSERO_RS10470 threonine synthase 0.12 HSERO_RS21760 DSBA oxidoreductase — —
Acidovorax sp. GW101-3H11 0.21 Ac3H11_1505 Threonine synthase (EC 4.2.3.1) 0.14 Ac3H11_724 Periplasmic thiol:disulfide interchange protein DsbA — —
Cupriavidus basilensis FW507-4G11 0.21 RR42_RS12535 threonine synthase 0.14 RR42_RS00835 DSBA oxidoreductase — —
Paraburkholderia graminis OAS925 0.21 ABIE53_002027 threonine synthase 0.16 ABIE53_000598 thiol:disulfide interchange protein DsbA — —
Paraburkholderia bryophila 376MFSha3.1 0.21 H281DRAFT_00811 L-threonine synthase 0.15 H281DRAFT_02081 thiol:disulfide interchange protein DsbA — —
Ralstonia solanacearum GMI1000 0.20 RS_RS06660 threonine synthase 0.15 RS_RS21435 thiol:disulfide interchange protein DsbA/DsbL — —
Burkholderia phytofirmans PsJN 0.20 BPHYT_RS08960 threonine synthase 0.15 BPHYT_RS02280 DSBA oxidoreductase — —
Ralstonia solanacearum UW163 0.20 UW163_RS13325 threonine synthase 0.13 UW163_RS03020 thiol:disulfide interchange protein DsbA/DsbL — —
Ralstonia solanacearum IBSBF1503 0.20 RALBFv3_RS15880 threonine synthase 0.13 RALBFv3_RS10560 thiol:disulfide interchange protein DsbA/DsbL — —
Ralstonia solanacearum PSI07 0.19 RPSI07_RS17485 threonine synthase 0.14 RPSI07_RS22755 thiol:disulfide interchange protein DsbA/DsbL — —

Not shown: 36 genomes with orthologs for HER17_RS02805 only; 2 genomes with orthologs for HER17_RS21475 only