Conservation of cofitness between HER17_RS11620 and HER17_RS03980 in Pectobacterium carotovorum WPP14

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS11620 NUDIX hydrolase 1.0 HER17_RS03980 autotransporter assembly complex protein TamA 0.77 17
Escherichia coli BL21 0.78 ECD_01132 bifunctional thiamine pyrimidine pyrophosphate hydrolase and thiamine pyrophosphate hydrolase 0.73 ECD_04091 translocation and assembly module for autotransporter export, outer membrane subunit — —
Escherichia coli ECRC98 0.78 JDDGAC_06615 nudJ phosphatase NudJ 0.73 JDDGAC_15640 tamA autotransporter assembly complex protein TamA low > 86
Escherichia fergusonii Becca 0.78 EFB2_02841 Phosphatase NudJ 0.73 EFB2_04309 Translocation and assembly module subunit TamA low > 86
Escherichia coli ECOR27 0.78 NOLOHH_20895 nudJ phosphatase NudJ 0.73 NOLOHH_04260 tamA autotransporter assembly complex protein TamA low > 75
Escherichia coli ECOR38 0.78 HEPCGN_24225 nudJ phosphatase NudJ 0.73 HEPCGN_10200 tamA autotransporter assembly complex protein TamA low > 87
Escherichia coli ECRC102 0.78 NIAGMN_24895 nudJ phosphatase NudJ 0.73 NIAGMN_09850 tamA autotransporter assembly complex protein TamA — —
Escherichia coli ECRC101 0.78 MCAODC_22335 nudJ phosphatase NudJ 0.73 MCAODC_02515 tamA autotransporter assembly complex protein TamA 0.45 61
Escherichia coli BW25113 0.78 b1134 ymfB bifunctional thiamin pyrimidine pyrophosphate hydrolase/ thiamin pyrophosphate hydrolase (NCBI) 0.73 b4220 ytfM predicted outer membrane protein and surface antigen (NCBI) low > 76
Escherichia coli ECRC100 0.78 OKFHMN_00750 nudJ phosphatase NudJ 0.73 OKFHMN_12000 tamA autotransporter assembly complex protein TamA low > 80
Escherichia coli ECRC99 0.78 KEDOAH_24835 nudJ phosphatase NudJ 0.73 KEDOAH_16155 tamA autotransporter assembly complex protein TamA — —
Escherichia coli Nissle 1917 0.78 ECOLIN_RS06630 phosphatase NudJ 0.73 ECOLIN_RS24510 autotransporter assembly complex protein TamA — —
Escherichia coli ECRC62 0.78 BNILDI_19060 nudJ phosphatase NudJ 0.73 BNILDI_07255 tamA autotransporter assembly complex protein TamA low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.78 OHPLBJKB_02534 Phosphatase NudJ 0.73 OHPLBJKB_03813 Translocation and assembly module subunit TamA low > 73
Dickeya dadantii 3937 0.77 DDA3937_RS11480 NUDIX hydrolase 0.77 DDA3937_RS17160 outer membrane protein assembly factor low > 74
Serratia liquefaciens MT49 0.77 IAI46_10445 NUDIX hydrolase 0.74 IAI46_01770 outer membrane protein assembly factor low > 86
Dickeya dianthicola 67-19 0.76 HGI48_RS11525 NUDIX hydrolase 0.76 HGI48_RS17215 outer membrane protein assembly factor low > 71
Dickeya dianthicola ME23 0.76 DZA65_RS11860 NUDIX hydrolase 0.76 DZA65_RS18295 outer membrane protein assembly factor low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF3419 Nudix-like NDP and NTP phosphohydrolase YmfB 0.74 GFF874 Uncharacterized protein YtfM precursor low > 78
Klebsiella michiganensis M5al 0.75 BWI76_RS11320 NUDIX hydrolase 0.73 BWI76_RS02775 outer membrane protein assembly factor — —
Erwinia tracheiphila SCR3 0.71 LU632_RS14570 NUDIX hydrolase 0.73 LU632_RS02105 autotransporter assembly complex protein TamA low > 74
Enterobacter sp. TBS_079 0.71 MPMX20_01818 Phosphatase NudJ 0.74 MPMX20_00503 Translocation and assembly module subunit TamA low > 85
Rahnella sp. WP5 0.71 EX31_RS24580 NUDIX hydrolase 0.75 EX31_RS08695 outer membrane protein assembly factor 0.46 6
Enterobacter asburiae PDN3 0.71 EX28DRAFT_1796 ADP-ribose pyrophosphatase 0.75 EX28DRAFT_3406 Outer membrane protein low > 76
Pantoea sp. MT58 0.65 IAI47_11910 NUDIX hydrolase 0.74 IAI47_02715 outer membrane protein assembly factor low > 76
Shewanella amazonensis SB2B 0.41 Sama_2061 MutT/nudix family protein (RefSeq) 0.25 Sama_1616 hypothetical protein (RefSeq) low > 62
Shewanella loihica PV-4 0.41 Shew_1561 NUDIX hydrolase (RefSeq) 0.25 Shew_2172 surface antigen (D15) (RefSeq) — —
Shewanella sp. ANA-3 0.40 Shewana3_1748 NUDIX hydrolase (RefSeq) 0.24 Shewana3_1894 surface antigen (D15) (RefSeq) low > 73
Shewanella oneidensis MR-1 0.39 SO2631 MutT/nudix family protein (NCBI ptt file) 0.24 SO2114 conserved hypothetical protein (NCBI ptt file) low > 76
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.2757.1 Nudix-like NDP and NTP phosphohydrolase YmfB 0.21 Xcc-8004.5193.1 Outer membrane protein assembly factor YaeT precursor low > 74
Rhodanobacter denitrificans FW104-10B01 0.35 LRK54_RS00430 NUDIX hydrolase 0.21 LRK54_RS12665 autotransporter assembly complex protein TamA low > 59
Rhodanobacter denitrificans MT42 0.35 LRK55_RS00170 NUDIX hydrolase 0.21 LRK55_RS12405 autotransporter assembly complex family protein low > 63
Dyella japonica UNC79MFTsu3.2 0.33 ABZR86_RS02190 NUDIX hydrolase 0.21 ABZR86_RS19705 autotransporter assembly complex family protein low > 74
Marinobacter adhaerens HP15 0.32 HP15_2085 MutT/nudix family protein 0.28 HP15_2341 surface antigen (D15) low > 73
Ralstonia sp. UNC404CL21Col 0.30 ABZR87_RS01335 NUDIX hydrolase 0.11 ABZR87_RS00015 autotransporter assembly complex family protein low > 80
Pseudomonas fluorescens GW456-L13 0.29 PfGW456L13_2640 Nudix-like NDP and NTP phosphohydrolase YmfB 0.30 PfGW456L13_2601 Uncharacterized protein YtfM precursor low > 87
Paraburkholderia bryophila 376MFSha3.1 0.29 H281DRAFT_04652 ADP-ribose pyrophosphatase YjhB, NUDIX family 0.11 H281DRAFT_00153 autotransporter secretion outer membrane protein TamA low > 103
Pseudomonas sp. RS175 0.29 PFR28_02618 Phosphatase NudJ 0.29 PFR28_02752 Translocation and assembly module subunit TamA 0.15 84
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_287 Nudix-like NDP and NTP phosphohydrolase YmfB 0.30 Pf6N2E2_144 Uncharacterized protein YtfM precursor low > 103
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS18575 NUDIX hydrolase 0.29 PFLU_RS18920 outer membrane protein assembly factor low > 109
Pseudomonas fluorescens SBW25 0.28 PFLU_RS18575 NUDIX hydrolase 0.29 PFLU_RS18920 outer membrane protein assembly factor low > 109
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_4049 Nudix-like NDP and NTP phosphohydrolase YmfB 0.29 Pf1N1B4_3997 Uncharacterized protein YtfM precursor low > 87
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_27700 NUDIX hydrolase 0.30 AO353_27865 hypothetical protein low > 101
Burkholderia phytofirmans PsJN 0.28 BPHYT_RS03365 NUDIX hydrolase 0.12 BPHYT_RS04945 membrane protein 0.37 63
Pseudomonas stutzeri RCH2 0.28 Psest_2022 ADP-ribose pyrophosphatase 0.28 Psest_2132 Outer membrane protein low > 67
Acidovorax sp. GW101-3H11 0.27 Ac3H11_4361 NTP pyrophosphohydrolases including oxidative damage repair enzymes 0.10 Ac3H11_3933 Surface antigen (D15) precursor low > 79
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_22115 NUDIX hydrolase 0.30 AO356_01050 hypothetical protein low > 104
Paraburkholderia graminis OAS925 0.27 ABIE53_000811 8-oxo-dGTP pyrophosphatase MutT (NUDIX family) 0.12 ABIE53_001263 translocation and assembly module TamA low > 113
Paraburkholderia sabiae LMG 24235 0.26 QEN71_RS26735 NUDIX hydrolase 0.11 QEN71_RS25050 autotransporter assembly complex family protein low > 153
Pseudomonas simiae WCS417 0.26 PS417_16535 NUDIX hydrolase 0.28 PS417_16970 membrane protein low > 88
Hydrogenophaga sp. GW460-11-11-14-LB1 0.26 GFF2602 NTP pyrophosphohydrolases including oxidative damage repair enzymes 0.08 GFF671 Surface antigen (D15) precursor low > 90
Lysobacter sp. OAE881 0.26 ABIE51_RS11505 NUDIX hydrolase 0.17 ABIE51_RS01235 autotransporter assembly complex family protein low > 62
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_3189 NUDIX hydrolase 0.27 Psyr_2478 surface antigen (D15):Surface antigen variable number low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_3189 NUDIX hydrolase 0.27 Psyr_2478 surface antigen (D15):Surface antigen variable number low > 86
Pseudomonas putida KT2440 0.25 PP_4013 MutT/nudix family protein 0.28 PP_2892 conserved exported protein of unknown function low > 96
Herbaspirillum seropedicae SmR1 0.24 HSERO_RS03475 NUDIX hydrolase 0.12 HSERO_RS07725 membrane protein low > 78
Cupriavidus basilensis FW507-4G11 0.23 RR42_RS17470 NUDIX hydrolase 0.12 RR42_RS16040 membrane protein low > 128

Not shown: 11 genomes with orthologs for HER17_RS11620 only; 8 genomes with orthologs for HER17_RS03980 only