Conservation of cofitness between HEPCGN_20570 and HEPCGN_25650 in Escherichia coli ECOR38

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_20570 pdxJ pyridoxine 5'-phosphate synthase 1.0 HEPCGN_25650 pyrF orotidine-5'-phosphate decarboxylase 0.84 18
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01143 'Pyridoxine 5'-phosphate synthase' transl_table=11 0.99 OHPLBJKB_02401 'Orotidine 5'-phosphate decarboxylase' transl_table=11 low > 73
Escherichia coli BW25113 1.00 b2564 pdxJ pyridoxal phosphate biosynthetic protein (NCBI) 0.91 b1281 pyrF orotidine 5'-phosphate decarboxylase (NCBI) low > 76
Escherichia coli ECRC62 1.00 BNILDI_11900 pdxJ pyridoxine 5'-phosphate synthase 0.99 BNILDI_18365 pyrF orotidine-5'-phosphate decarboxylase low > 75
Escherichia coli BL21 1.00 ECD_02458 pyridoxine 5'-phosphate synthase 0.88 ECD_01258 orotidine-5'-phosphate decarboxylase — —
Escherichia coli ECOR27 1.00 NOLOHH_13100 pdxJ pyridoxine 5'-phosphate synthase 0.99 NOLOHH_20215 pyrF orotidine-5'-phosphate decarboxylase 0.62 54
Escherichia coli ECRC102 1.00 NIAGMN_19195 pdxJ pyridoxine 5'-phosphate synthase 1.00 NIAGMN_26720 pyrF orotidine-5'-phosphate decarboxylase — —
Escherichia coli ECRC100 1.00 OKFHMN_21425 pdxJ pyridoxine 5'-phosphate synthase 1.00 OKFHMN_02550 pyrF orotidine-5'-phosphate decarboxylase low > 80
Escherichia coli ECRC98 1.00 JDDGAC_25090 pdxJ pyridoxine 5'-phosphate synthase 1.00 JDDGAC_05095 pyrF orotidine-5'-phosphate decarboxylase — —
Escherichia coli ECRC101 1.00 MCAODC_11955 pdxJ pyridoxine 5'-phosphate synthase 1.00 MCAODC_15715 pyrF orotidine-5'-phosphate decarboxylase 0.65 42
Escherichia coli ECRC99 0.99 KEDOAH_06795 pdxJ pyridoxine 5'-phosphate synthase 1.00 KEDOAH_26215 pyrF orotidine-5'-phosphate decarboxylase — —
Escherichia fergusonii Becca 0.99 EFB2_01332 Pyridoxine 5'-phosphate synthase 1.00 EFB2_02644 Orotidine 5'-phosphate decarboxylase low > 86
Escherichia coli Nissle 1917 0.98 ECOLIN_RS14515 pyridoxine 5'-phosphate synthase 0.84 ECOLIN_RS07730 orotidine-5'-phosphate decarboxylase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.94 GFF2472 'Pyridoxine 5'-phosphate synthase (EC 2.6.99.2)' transl_table=11 0.82 GFF2704 'Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)' transl_table=11 — —
Klebsiella michiganensis M5al 0.93 BWI76_RS21305 pyridoxine 5'-phosphate synthase 0.74 BWI76_RS11965 orotidine-5'-phosphate decarboxylase — —
Enterobacter sp. TBS_079 0.93 MPMX20_03435 Pyridoxine 5'-phosphate synthase 0.77 MPMX20_02494 Orotidine 5'-phosphate decarboxylase low > 85
Enterobacter asburiae PDN3 0.92 EX28DRAFT_0082 pyridoxine 5'-phosphate synthase 0.77 EX28DRAFT_0954 orotidine-5'-phosphate decarboxylase (EC 4.1.1.23) — —
Pectobacterium carotovorum WPP14 0.81 HER17_RS05830 pyridoxine 5'-phosphate synthase 0.68 HER17_RS09390 orotidine-5'-phosphate decarboxylase 0.94 1
Dickeya dianthicola 67-19 0.81 HGI48_RS15805 pyridoxine 5'-phosphate synthase 0.69 HGI48_RS12580 orotidine-5'-phosphate decarboxylase low > 71
Dickeya dianthicola ME23 0.81 DZA65_RS16885 pyridoxine 5'-phosphate synthase 0.68 DZA65_RS13030 orotidine-5'-phosphate decarboxylase 0.48 63
Dickeya dadantii 3937 0.81 DDA3937_RS15720 pyridoxine 5'-phosphate synthase 0.68 DDA3937_RS12525 orotidine-5'-phosphate decarboxylase low > 74
Pantoea sp. MT58 0.79 IAI47_04895 pyridoxine 5'-phosphate synthase 0.70 IAI47_09275 orotidine-5'-phosphate decarboxylase low > 76
Rahnella sp. WP5 0.79 EX31_RS21850 pyridoxine 5'-phosphate synthase 0.71 EX31_RS09855 orotidine-5'-phosphate decarboxylase 0.71 46
Serratia liquefaciens MT49 0.78 IAI46_19535 pyridoxine 5'-phosphate synthase 0.66 IAI46_13915 orotidine-5'-phosphate decarboxylase — —
Erwinia tracheiphila SCR3 0.76 LU632_RS15370 pdxJ pyridoxine 5'-phosphate synthase 0.63 LU632_RS12500 pyrF orotidine-5'-phosphate decarboxylase — —
Kangiella aquimarina DSM 16071 0.75 B158DRAFT_2190 pyridoxine 5'-phosphate synthase 0.52 B158DRAFT_2331 orotidine-5'-phosphate decarboxylase (EC 4.1.1.23) — —
Alteromonas macleodii MIT1002 0.72 MIT1002_00791 Pyridoxine 5'-phosphate synthase 0.54 MIT1002_02184 Orotidine 5'-phosphate decarboxylase — —
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_12440 pyridoxine 5'-phosphate synthase 0.62 CSW01_09560 orotidine-5'-phosphate decarboxylase — —
Shewanella sp. ANA-3 0.67 Shewana3_3023 pyridoxine 5'-phosphate synthase (RefSeq) 0.57 Shewana3_1981 orotidine 5'-phosphate decarboxylase (RefSeq) — —
Shewanella loihica PV-4 0.67 Shew_1057 pyridoxal phosphate biosynthetic protein PdxJ (RefSeq) 0.57 Shew_1958 orotidine 5'-phosphate decarboxylase (RefSeq) — —
Shewanella oneidensis MR-1 0.67 SO1351 pdxJ pyridoxal phosphate biosynthetic protein PdxJ (NCBI ptt file) 0.56 SO2398 pyrF orotidine 5`-phosphate decarboxylase (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.66 Sama_0883 pyridoxine 5'-phosphate synthase (RefSeq) 0.58 Sama_1740 orotidine 5'-phosphate decarboxylase (RefSeq) — —
Pseudomonas sp. RS175 0.63 PFR28_03520 'Pyridoxine 5'-phosphate synthase' transl_table=11 0.47 PFR28_03064 'Orotidine 5'-phosphate decarboxylase' transl_table=11 — —
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_889 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.47 Pf1N1B4_514 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) — —
Pseudomonas putida KT2440 0.63 PP_1436 Pyridoxine 5'-phosphate synthase 0.46 PP_1815 Orotidine 5'-phosphate decarboxylase — —
Pseudomonas sp. S08-1 0.63 OH686_20095 pyridoxine 5'-phosphate synthase 0.48 OH686_00580 Orotidine 5'-phosphate decarboxylase — —
Pseudomonas fluorescens FW300-N2C3 0.63 AO356_17510 pyridoxine 5'-phosphate synthase 0.47 AO356_19850 orotidine 5'-phosphate decarboxylase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.62 Psyr_3948 pyridoxine 5'-phosphate synthase 0.46 Psyr_1836 orotidine-5'-phosphate decarboxylase — —
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_4837 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.49 PfGW456L13_2056 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) — —
Pseudomonas syringae pv. syringae B728a 0.62 Psyr_3948 pyridoxine 5'-phosphate synthase 0.46 Psyr_1836 orotidine-5'-phosphate decarboxylase — —
Pseudomonas fluorescens FW300-N2E2 0.62 Pf6N2E2_5429 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.47 Pf6N2E2_5887 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) — —
Pseudomonas fluorescens FW300-N2E3 0.61 AO353_04495 pyridoxine 5'-phosphate synthase 0.49 AO353_01670 orotidine 5'-phosphate decarboxylase — —
Pseudomonas stutzeri RCH2 0.61 Psest_3089 pyridoxine 5'-phosphate synthase 0.49 Psest_1714 orotidine 5'-phosphate decarboxylase, subfamily 1 — —
Pseudomonas simiae WCS417 0.61 PS417_05205 pyridoxine 5'-phosphate synthase 0.48 PS417_09055 orotidine 5'-phosphate decarboxylase — —
Pseudomonas fluorescens SBW25-INTG 0.60 PFLU_RS05275 pyridoxine 5'-phosphate synthase 0.50 PFLU_RS09110 orotidine-5'-phosphate decarboxylase — —
Pseudomonas fluorescens SBW25 0.60 PFLU_RS05275 pyridoxine 5'-phosphate synthase 0.50 PFLU_RS09110 orotidine-5'-phosphate decarboxylase — —
Marinobacter adhaerens HP15 0.60 HP15_787 pyridoxal phosphate biosynthetic protein PdxJ 0.55 HP15_1370 orotidine 5'-phosphate decarboxylase — —
Acinetobacter radioresistens SK82 0.60 MPMX26_02152 Pyridoxine 5'-phosphate synthase 0.49 MPMX26_01242 Orotidine 5'-phosphate decarboxylase — —
Phaeobacter inhibens DSM 17395 0.55 PGA1_c01030 pyridoxine 5'-phosphate synthase PdxJ 0.19 PGA1_c32450 orotidine 5'-phosphate decarboxylase PyrF — —
Dinoroseobacter shibae DFL-12 0.54 Dshi_0196 pyridoxal phosphate biosynthetic protein PdxJ (RefSeq) 0.16 Dshi_0615 orotidine 5'-phosphate decarboxylase (RefSeq) — —
Magnetospirillum magneticum AMB-1 0.53 AMB_RS11405 pyridoxine 5'-phosphate synthase 0.30 AMB_RS20255 orotidine-5'-phosphate decarboxylase — —
Bosea sp. OAE506 0.52 ABIE41_RS19905 pyridoxine 5'-phosphate synthase 0.25 ABIE41_RS00050 orotidine-5'-phosphate decarboxylase low > 77
Synechococcus elongatus PCC 7942 0.52 Synpcc7942_1194 pdxJ pyridoxal phosphate biosynthetic protein PdxJ 0.30 Synpcc7942_2569 pyrF orotidine 5'-phosphate decarboxylase — —
Caulobacter crescentus NA1000 Δfur 0.52 CCNA_01626 pyridoxal phosphate biosynthetic protein pdxJ 0.23 CCNA_00104 orotidine 5'-phosphate decarboxylase — —
Caulobacter crescentus NA1000 0.52 CCNA_01626 pyridoxal phosphate biosynthetic protein pdxJ 0.23 CCNA_00104 orotidine 5'-phosphate decarboxylase — —
Desulfovibrio vulgaris Hildenborough JW710 0.51 DVU1908 pdxJ pyridoxal phosphate biosynthetic protein PdxJ (TIGR) 0.29 DVU0901 pyrF orotidine 5`-phosphate decarboxylase (TIGR) — —
Desulfovibrio vulgaris Miyazaki F 0.51 DvMF_0281 pyridoxine 5'-phosphate synthase (RefSeq) 0.30 DvMF_1137 orotidine 5'-phosphate decarboxylase (RefSeq) low > 51
Rhodospirillum rubrum S1H 0.50 Rru_A1854 Pyridoxal phosphate biosynthetic protein PdxJ (NCBI) 0.34 Rru_A3424 Orotidine-5'-phosphate decarboxylase (NCBI) low > 58
Sphingomonas koreensis DSMZ 15582 0.50 Ga0059261_2011 pyridoxine 5'-phosphate synthase 0.31 Ga0059261_0234 orotidine-5'-phosphate decarboxylase (EC 4.1.1.23) — —
Rhodopseudomonas palustris CGA009 0.48 TX73_013960 pyridoxine 5'-phosphate synthase 0.28 TX73_001750 orotidine-5'-phosphate decarboxylase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.42 A4249_RS05520 pyridoxine 5'-phosphate synthase 0.22 A4249_RS14665 orotidine-5'-phosphate decarboxylase — —
Agrobacterium fabrum C58 0.31 Atu2024 pyridoxal phosphate biosynthesis protein 0.26 Atu0298 orotidine 5 — —
Sinorhizobium meliloti 1021 0.28 SMc01407 pyridoxine 5'-phosphate synthase 0.27 SMc00412 orotidine 5'-phosphate decarboxylase — —
Xanthomonas campestris pv. campestris strain 8004 0.28 Xcc-8004.17.1 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.21 Xcc-8004.5259.1 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) — —
Rhizobium sp. OAE497 0.26 ABIE40_RS11420 pyridoxine 5'-phosphate synthase 0.27 ABIE40_RS01345 orotidine-5'-phosphate decarboxylase — —

Not shown: 34 genomes with orthologs for HEPCGN_20570 only; 1 genomes with orthologs for HEPCGN_25650 only