Conservation of cofitness between HEPCGN_08480 and HEPCGN_08460 in Escherichia coli ECOR38

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_08480 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 1.0 HEPCGN_08460 acnB bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 0.79 28
Escherichia coli BW25113 1.00 b0114 aceE pyruvate dehydrogenase subunit E1 (NCBI) 1.00 b0118 acnB aconitate hydratase (NCBI) 0.48 9
Escherichia coli ECOR27 1.00 NOLOHH_02845 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 1.00 NOLOHH_02825 acnB bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase low > 75
Escherichia coli ECRC62 1.00 BNILDI_08765 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 1.00 BNILDI_08785 acnB bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase low > 75
Escherichia coli ECRC100 1.00 OKFHMN_10500 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 1.00 OKFHMN_10480 acnB bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
Escherichia coli ECRC99 1.00 KEDOAH_17655 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 1.00 KEDOAH_17675 acnB bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03547 Pyruvate dehydrogenase E1 component 1.00 OHPLBJKB_03543 Aconitate hydratase B
Escherichia coli ECRC101 1.00 MCAODC_01015 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 1.00 MCAODC_00995 acnB bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
Escherichia coli ECRC98 1.00 JDDGAC_14095 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 1.00 JDDGAC_14075 acnB bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
Escherichia coli ECRC102 1.00 NIAGMN_08350 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 1.00 NIAGMN_08330 acnB bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
Escherichia coli Nissle 1917 1.00 ECOLIN_RS00640 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 1.00 ECOLIN_RS00660 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
Escherichia fergusonii Becca 1.00 EFB2_03931 Pyruvate dehydrogenase E1 component 1.00 EFB2_03927 Aconitate hydratase B low > 86
Escherichia coli BL21 1.00 ECD_00113 pyruvate dehydrogenase, decarboxylase component E1, thiamine triphosphate-binding 1.00 ECD_00117 aconitate hydratase 2; aconitase B; 2-methyl-cis-aconitate hydratase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF122 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.92 GFF115 Aconitate hydratase 2 (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99) low > 78
Klebsiella michiganensis M5al 0.96 BWI76_RS04880 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.95 BWI76_RS04910 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
Enterobacter asburiae PDN3 0.95 EX28DRAFT_3710 pyruvate dehydrogenase E1 component, homodimeric type 0.95 EX28DRAFT_3715 aconitase (EC 4.2.1.3)
Enterobacter sp. TBS_079 0.95 MPMX20_00807 Pyruvate dehydrogenase E1 component 0.94 MPMX20_00812 Aconitate hydratase B low > 85
Pectobacterium carotovorum WPP14 0.92 HER17_RS03290 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.91 HER17_RS03360 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
Pantoea sp. MT58 0.92 IAI47_15810 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.92 IAI47_15770 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
Erwinia tracheiphila SCR3 0.92 LU632_RS03080 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.91 LU632_RS20210 acnB bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
Dickeya dadantii 3937 0.91 DDA3937_RS17925 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.91 DDA3937_RS17885 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
Dickeya dianthicola ME23 0.91 DZA65_RS19000 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.91 DZA65_RS18970 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
Dickeya dianthicola 67-19 0.91 HGI48_RS17850 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.91 HGI48_RS17825 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
Rahnella sp. WP5 0.91 EX31_RS03480 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.90 EX31_RS03400 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase low > 89
Serratia liquefaciens MT49 0.90 IAI46_21325 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.91 IAI46_21305 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
Shewanella amazonensis SB2B 0.74 Sama_0375 aceE pyruvate dehydrogenase subunit E1 (RefSeq) 0.83 Sama_0382 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase (RefSeq)
Vibrio cholerae E7946 ATCC 55056 0.74 CSW01_12220 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.83 CSW01_03185 aconitate hydratase B
Shewanella sp. ANA-3 0.69 Shewana3_0426 aceE pyruvate dehydrogenase subunit E1 (RefSeq) 0.81 Shewana3_0433 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase (RefSeq)
Shewanella loihica PV-4 0.69 Shew_3431 aceE pyruvate dehydrogenase subunit E1 (RefSeq) 0.81 Shew_3424 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase (RefSeq)
Shewanella oneidensis MR-1 0.69 SO0424 aceE pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase (NCBI ptt file) 0.81 SO0432 acnB aconitate hydratase 2 (NCBI ptt file)
Alteromonas macleodii MIT1002 0.66 MIT1002_03003 Pyruvate dehydrogenase E1 component 0.76 MIT1002_00774 Aconitate hydratase 2 low > 70
Kangiella aquimarina DSM 16071 0.65 B158DRAFT_2144 pyruvate dehydrogenase E1 component, homodimeric type 0.77 B158DRAFT_2500 aconitase (EC 4.2.1.3)
Dinoroseobacter shibae DFL-12 0.62 Dshi_1968 2-oxo-acid dehydrogenase E1 subunit, homodimeric type (RefSeq) 0.18 Dshi_2060 Aconitate hydratase (EC 4.2.1.3) (from data) low > 64
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS07365 pyruvate dehydrogenase 0.74 RR42_RS23515 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase low > 128
Acidovorax sp. GW101-3H11 0.61 Ac3H11_4093 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.71 Ac3H11_3150 Aconitate hydratase 2 (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99)
Ralstonia sp. UNC404CL21Col 0.61 ABZR87_RS13470 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.74 ABZR87_RS20490 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
Pseudomonas putida KT2440 0.60 PP_0339 Pyruvate dehydrogenase E1 component 0.80 PP_2339 bifunctional aconitate hydratase 2 and 2-methylisocitrate dehydratase
Ralstonia solanacearum GMI1000 0.60 RS_RS08055 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.73 RS_RS18745 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
Pseudomonas fluorescens FW300-N1B4 0.60 Pf1N1B4_1476 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.80 Pf1N1B4_4564 Aconitate hydratase 2 (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99)
Pseudomonas fluorescens GW456-L13 0.60 PfGW456L13_214 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.80 PfGW456L13_3378 Aconitate hydratase 2 (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99)
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_0518 2-oxo-acid dehydrogenase E1 component homodimeric type 0.81 Psyr_1726 aconitase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_0518 2-oxo-acid dehydrogenase E1 component homodimeric type 0.81 Psyr_1726 aconitase
Pseudomonas stutzeri RCH2 0.60 Psest_0448 pyruvate dehydrogenase E1 component, homodimeric type 0.81 Psest_2309 aconitate hydratase 2
Pseudomonas sp. S08-1 0.60 OH686_09710 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.80 OH686_03970 aconitate hydratase 2
Pseudomonas sp. RS175 0.60 PFR28_05061 Pyruvate dehydrogenase E1 component 0.80 PFR28_02376 Aconitate hydratase B
Pseudomonas fluorescens FW300-N2E2 0.60 Pf6N2E2_3674 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.80 Pf6N2E2_564 Aconitate hydratase 2 (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99)
Pseudomonas fluorescens FW300-N2C3 0.60 AO356_08960 pyruvate dehydrogenase 0.80 AO356_24390 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
Pseudomonas fluorescens SBW25 0.60 PFLU_RS02275 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.79 PFLU_RS17020 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
Pseudomonas fluorescens SBW25-INTG 0.60 PFLU_RS02275 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.79 PFLU_RS17020 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.60 GFF4890 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.72 GFF3374 Aconitate hydratase 2 (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99) low > 90
Dechlorosoma suillum PS 0.59 Dsui_1578 pyruvate dehydrogenase E1 component, homodimeric type 0.71 Dsui_2205 aconitate hydratase 2
Pseudomonas simiae WCS417 0.59 PS417_02220 pyruvate dehydrogenase 0.79 PS417_14990 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
Pseudomonas fluorescens FW300-N2E3 0.59 AO353_12865 pyruvate dehydrogenase 0.80 AO353_21605 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
Variovorax sp. SCN45 0.59 GFF967 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.71 GFF3905 Aconitate hydratase 2 (EC 4.2.1.3) low > 127
Burkholderia phytofirmans PsJN 0.59 BPHYT_RS12840 pyruvate dehydrogenase 0.73 BPHYT_RS10160 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase low > 109
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS05725 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.74 QEN71_RS19735 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
Castellaniella sp019104865 MT123 0.58 ABCV34_RS04160 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.74 ABCV34_RS01645 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
Lysobacter sp. OAE881 0.57 ABIE51_RS18795 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.74 ABIE51_RS11520 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
Marinobacter adhaerens HP15 0.57 HP15_3046 pyruvate dehydrogenase subunit E1 0.73 HP15_2203 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
Acinetobacter radioresistens SK82 0.57 MPMX26_02925 Pyruvate dehydrogenase E1 component 0.73 MPMX26_01191 Aconitate hydratase B
Xanthomonas campestris pv. campestris strain 8004 0.56 Xcc-8004.754.1 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.73 Xcc-8004.2891.1 Aconitate hydratase 2 (EC 4.2.1.3)
Dyella japonica UNC79MFTsu3.2 0.56 ABZR86_RS12410 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.73 ABZR86_RS02170 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase low > 74
Azospirillum sp. SherDot2 0.07 MPMX19_03172 Pyruvate dehydrogenase E1 component 0.74 MPMX19_04841 Aconitate hydratase B

Not shown: 14 genomes with orthologs for HEPCGN_08480 only; 6 genomes with orthologs for HEPCGN_08460 only