Conservation of cofitness between PS417_23385 and PS417_03830 in Pseudomonas simiae WCS417

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_23385 cytochrome o ubiquinol oxidase subunit I 1.0 PS417_03830 protein disaggregation chaperone 0.39 18
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS25215 cytochrome o ubiquinol oxidase subunit I 0.99 PFLU_RS03880 ATP-dependent chaperone ClpB low > 109
Pseudomonas fluorescens SBW25 0.99 PFLU_RS25215 cytochrome o ubiquinol oxidase subunit I 0.99 PFLU_RS03880 ATP-dependent chaperone ClpB low > 109
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_972 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) 0.96 Pf1N1B4_2824 ClpB protein low > 87
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_16965 cytochrome o ubiquinol oxidase subunit I 0.97 AO356_15935 ATP-dependent chaperone ClpB low > 104
Pseudomonas sp. RS175 0.92 PFR28_00243 Cytochrome bo(3) ubiquinol oxidase subunit 1 0.97 PFR28_03746 Chaperone protein ClpB low > 88
Pseudomonas fluorescens FW300-N2E2 0.92 Pf6N2E2_5318 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) 0.97 Pf6N2E2_5129 ClpB protein low > 103
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_15455 cytochrome o ubiquinol oxidase subunit I 0.95 AO353_14230 ATP-dependent chaperone ClpB low > 101
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_4935 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) 0.96 PfGW456L13_1495 ClpB protein 0.54 21
Pseudomonas syringae pv. syringae B728a ΔmexB 0.83 Psyr_1142 cytochrome bo3 quinol oxidase subunit 1 apoprotein 0.95 Psyr_0728 AAA ATPase, central region:Clp, N terminal:Clp, N terminal — —
Pseudomonas syringae pv. syringae B728a 0.83 Psyr_1142 cytochrome bo3 quinol oxidase subunit 1 apoprotein 0.95 Psyr_0728 AAA ATPase, central region:Clp, N terminal:Clp, N terminal — —
Pseudomonas putida KT2440 0.82 PP_0813 cytochrome bo terminal oxidase subunit I 0.93 PP_0625 Chaperone protein ClpB — —
Shewanella loihica PV-4 0.72 Shew_0367 cytochrome-c oxidase (RefSeq) 0.70 Shew_2948 ATPase (RefSeq) low > 60
Shewanella sp. ANA-3 0.72 Shewana3_4032 cytochrome c oxidase, subunit I (RefSeq) 0.70 Shewana3_3169 ATPase (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.71 MIT1002_03928 Ubiquinol oxidase subunit 1 0.71 MIT1002_02677 Heat shock protein F84.1 low > 70
Pectobacterium carotovorum WPP14 0.70 HER17_RS15880 cytochrome o ubiquinol oxidase subunit I 0.70 HER17_RS05410 ATP-dependent chaperone ClpB low > 75
Dickeya dianthicola ME23 0.70 DZA65_RS05980 cytochrome o ubiquinol oxidase subunit I 0.69 DZA65_RS17320 ATP-dependent chaperone ClpB low > 75
Dickeya dadantii 3937 0.70 DDA3937_RS05610 cytochrome o ubiquinol oxidase subunit I 0.69 DDA3937_RS16100 ATP-dependent chaperone ClpB low > 74
Serratia liquefaciens MT49 0.70 IAI46_04980 cytochrome o ubiquinol oxidase subunit I 0.69 IAI46_03995 ATP-dependent chaperone ClpB low > 86
Escherichia coli ECOR38 0.70 HEPCGN_06980 cyoB cytochrome o ubiquinol oxidase subunit I 0.70 HEPCGN_20390 clpB ATP-dependent chaperone ClpB low > 85
Dickeya dianthicola 67-19 0.70 HGI48_RS05655 cytochrome o ubiquinol oxidase subunit I 0.69 HGI48_RS16225 ATP-dependent chaperone ClpB low > 71
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_03242 Cytochrome bo(3) ubiquinol oxidase subunit 1 0.70 OHPLBJKB_01114 Chaperone protein ClpB low > 73
Escherichia coli BL21 0.70 ECD_00382 cytochrome o ubiquinol oxidase subunit I 0.70 ECD_02482 protein disaggregation chaperone 0.71 28
Escherichia coli Nissle 1917 0.70 ECOLIN_RS02590 cytochrome o ubiquinol oxidase subunit I 0.70 ECOLIN_RS14665 ATP-dependent chaperone ClpB — —
Escherichia coli ECRC101 0.70 OKFHMN_08365 cyoB cytochrome o ubiquinol oxidase subunit I 0.70 OKFHMN_21265 clpB ATP-dependent chaperone ClpB — —
Escherichia coli ECRC102 0.70 NIAGMN_06420 cyoB cytochrome o ubiquinol oxidase subunit I 0.70 NIAGMN_19035 clpB ATP-dependent chaperone ClpB — —
Escherichia coli ECRC62 0.70 BNILDI_22715 cyoB cytochrome o ubiquinol oxidase subunit I 0.70 BNILDI_11745 clpB ATP-dependent chaperone ClpB — —
Escherichia coli ECRC101 0.70 MCAODC_27590 cyoB cytochrome o ubiquinol oxidase subunit I 0.70 MCAODC_11795 clpB ATP-dependent chaperone ClpB — —
Escherichia coli ECRC98 0.70 JDDGAC_12020 cyoB cytochrome o ubiquinol oxidase subunit I 0.70 JDDGAC_24930 clpB ATP-dependent chaperone ClpB — —
Escherichia coli ECRC99 0.70 KEDOAH_19600 cyoB cytochrome o ubiquinol oxidase subunit I 0.70 KEDOAH_06955 clpB ATP-dependent chaperone ClpB — —
Escherichia coli ECOR27 0.70 NOLOHH_01300 cyoB cytochrome o ubiquinol oxidase subunit I 0.70 NOLOHH_12940 clpB ATP-dependent chaperone ClpB low > 57
Klebsiella michiganensis M5al 0.70 BWI76_RS06490 cytochrome ubiquinol oxidase subunit I 0.70 BWI76_RS21440 ATP-dependent chaperone ClpB low > 92
Escherichia coli BW25113 0.70 b0431 cyoB cytochrome o ubiquinol oxidase subunit I (NCBI) 0.70 b2592 clpB protein disaggregation chaperone (NCBI) low > 76
Escherichia fergusonii Becca 0.70 EFB2_03626 Cytochrome bo(3) ubiquinol oxidase subunit 1 0.70 EFB2_01298 Chaperone protein ClpB low > 86
Ralstonia solanacearum PSI07 0.69 RPSI07_RS10570 cytochrome o ubiquinol oxidase subunit I 0.64 RPSI07_RS17450 ATP-dependent chaperone ClpB low > 81
Enterobacter asburiae PDN3 0.69 EX28DRAFT_2540 cytochrome o ubiquinol oxidase, subunit I 0.70 EX28DRAFT_2693 ATP-dependent chaperone ClpB low > 76
Enterobacter sp. TBS_079 0.69 MPMX20_01022 Cytochrome bo(3) ubiquinol oxidase subunit 1 0.70 MPMX20_03461 Chaperone protein ClpB low > 85
Rahnella sp. WP5 0.69 EX31_RS22215 cytochrome o ubiquinol oxidase subunit I 0.69 EX31_RS07560 ATP-dependent chaperone ClpB low > 89
Cupriavidus basilensis FW507-4G11 0.69 RR42_RS32595 cytochrome o ubiquinol oxidase subunit I 0.64 RR42_RS12455 protein disaggregation chaperone low > 128
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.69 GFF4345 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) 0.70 GFF4184 ClpB protein low > 78
Ralstonia sp. UNC404CL21Col 0.68 ABZR87_RS02330 cytochrome o ubiquinol oxidase subunit I 0.64 ABZR87_RS11485 ATP-dependent chaperone ClpB low > 80
Ralstonia solanacearum GMI1000 0.68 RS_RS14605 cytochrome o ubiquinol oxidase subunit I 0.64 RS_RS06695 chaperone protein ClpB low > 80
Pantoea sp. MT58 0.68 IAI47_14685 cytochrome o ubiquinol oxidase subunit I 0.70 IAI47_04435 ATP-dependent chaperone ClpB low > 76
Ralstonia solanacearum UW163 0.68 UW163_RS06970 cytochrome o ubiquinol oxidase subunit I 0.65 UW163_RS13360 ATP-dependent chaperone ClpB — —
Ralstonia solanacearum IBSBF1503 0.68 RALBFv3_RS06655 cytochrome o ubiquinol oxidase subunit I 0.65 RALBFv3_RS00030 ATP-dependent chaperone ClpB low > 76
Erwinia tracheiphila SCR3 0.67 LU632_RS18380 cyoB cytochrome o ubiquinol oxidase subunit I 0.70 LU632_RS16935 clpB ATP-dependent chaperone ClpB — —
Paraburkholderia sabiae LMG 24235 0.67 QEN71_RS15345 cytochrome o ubiquinol oxidase subunit I 0.68 QEN71_RS22370 ATP-dependent chaperone ClpB low > 153
Burkholderia phytofirmans PsJN 0.66 BPHYT_RS24920 cytochrome O ubiquinol oxidase 0.67 BPHYT_RS08990 protein disaggregation chaperone low > 109
Xanthomonas campestris pv. campestris strain 8004 0.66 Xcc-8004.3816.1 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) 0.71 Xcc-8004.1382.1 ClpB protein low > 74
Acinetobacter radioresistens SK82 0.65 MPMX26_01161 Cytochrome bo(3) ubiquinol oxidase subunit 1 0.66 MPMX26_01096 Chaperone protein ClpB low > 36
Caulobacter crescentus NA1000 Δfur 0.64 CCNA_01850 quinol cytochrome oxidase polypeptide I 0.56 CCNA_00922 ClpB protein low > 67
Caulobacter crescentus NA1000 0.64 CCNA_01850 quinol cytochrome oxidase polypeptide I 0.56 CCNA_00922 ClpB protein low > 66
Azospirillum sp. SherDot2 0.63 MPMX19_06176 Cytochrome bo(3) ubiquinol oxidase subunit 1 0.60 MPMX19_02442 Chaperone protein ClpB — —
Rhizobium sp. OAE497 0.63 ABIE40_RS19820 cytochrome o ubiquinol oxidase subunit I 0.58 ABIE40_RS17260 ATP-dependent chaperone ClpB low > 107
Variovorax sp. OAS795 0.62 ABID97_RS07635 cytochrome o ubiquinol oxidase subunit I 0.64 ABID97_RS10930 ATP-dependent chaperone ClpB low > 91
Paraburkholderia graminis OAS925 0.62 ABIE53_005341 cytochrome o ubiquinol oxidase subunit 1 0.67 ABIE53_002033 ATP-dependent Clp protease ATP-binding subunit ClpB low > 113
Agrobacterium fabrum C58 0.62 Atu0141 cytochrome O ubiquinol oxidase subunit I 0.57 Atu4177 ATP-dependent Clp protease, ATP-binding subunit low > 89
Sinorhizobium meliloti 1021 0.62 SM_b21488 cytochrome o ubiquinol oxidase subunit I 0.57 SMc02433 ATP-dependent protease low > 103
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS12315 cytochrome O ubiquinol oxidase 0.65 HSERO_RS10545 protein disaggregation chaperone — —
Variovorax sp. SCN45 0.62 GFF5677 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) 0.64 GFF2792 Chaperone protein ClpB (ATP-dependent unfoldase) low > 127
Paraburkholderia bryophila 376MFSha3.1 0.61 H281DRAFT_03427 cytochrome bo3 quinol oxidase subunit 1 apoprotein 0.67 H281DRAFT_00817 ATP-dependent Clp protease ATP-binding subunit ClpB low > 103
Azospirillum brasilense Sp245 0.61 AZOBR_RS23175 cytochrome O ubiquinol oxidase 0.59 AZOBR_RS18950 ATPase AAA low > 97
Lysobacter sp. OAE881 0.61 ABIE51_RS09770 cytochrome o ubiquinol oxidase subunit I 0.72 ABIE51_RS04925 ATP-dependent chaperone ClpB low > 62
Dyella japonica UNC79MFTsu3.2 0.60 ABZR86_RS07620 cytochrome o ubiquinol oxidase subunit I 0.70 ABZR86_RS10940 ATP-dependent chaperone ClpB low > 74
Brevundimonas sp. GW460-12-10-14-LB2 0.60 A4249_RS04450 cytochrome o ubiquinol oxidase subunit I 0.57 A4249_RS11010 ATP-dependent chaperone ClpB low > 48
Bosea sp. OAE506 0.59 ABIE41_RS21025 cytochrome o ubiquinol oxidase subunit I 0.57 ABIE41_RS23785 ATP-dependent chaperone ClpB low > 77
Sphingomonas koreensis DSMZ 15582 0.58 Ga0059261_1565 cytochrome bo3 quinol oxidase subunit 1 apoprotein (EC 1.10.3.-) 0.58 Ga0059261_1434 ATP-dependent chaperone ClpB low > 68
Acidovorax sp. GW101-3H11 0.56 Ac3H11_3142 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) 0.64 Ac3H11_1474 ClpB protein — —

Not shown: 0 genomes with orthologs for PS417_23385 only; 34 genomes with orthologs for PS417_03830 only