| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas stutzeri RCH2 | 1.0 | Psest_1309 | | ABC-type branched-chain amino acid transport systems, ATPase component | 1.0 | Psest_0692 | | rRNA methylase, putative, group 3 | 0.24 | 13 |
| Pseudomonas sp. S08-1 | 0.89 | OH686_04620 | | Branched-chain amino acid ABC transporter, ATP-binding protein LivG | 0.84 | OH686_15915 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase | low | > 80 |
| Pseudomonas fluorescens FW300-N1B4 | 0.87 | Pf1N1B4_3215 | | Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) | 0.87 | Pf1N1B4_1402 | | 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.86 | Pf6N2E2_2925 | | ABC transporter for L-leucine/L-isoleucine/L-phenylalanine/D-alanine, ATPase component 1 LivG (from data) | 0.88 | Pf6N2E2_3606 | | 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.86 | AO356_05335 | | ABC transporter ATP-binding protein | 0.89 | AO356_08605 | | 23S rRNA methyltransferase | low | > 104 |
| Pseudomonas syringae pv. syringae B728a | 0.86 | Psyr_3848 | | L-valine ABC transporter ATP-binding protein / L-isoleucine ABC transporter ATP-binding protein / L-leucine ABC transporter ATP-binding protein | 0.89 | Psyr_0580 | | 23S rRNA Gm-2251 2'-O-methyltransferase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.86 | Psyr_3848 | | L-valine ABC transporter ATP-binding protein / L-isoleucine ABC transporter ATP-binding protein / L-leucine ABC transporter ATP-binding protein | 0.89 | Psyr_0580 | | 23S rRNA Gm-2251 2'-O-methyltransferase | low | > 86 |
| Pseudomonas fluorescens GW456-L13 | 0.86 | PfGW456L13_4610 | | Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) | 0.89 | PfGW456L13_143 | | 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) | low | > 87 |
| Pseudomonas sp. RS175 | 0.85 | PFR28_00537 | | Lipopolysaccharide export system ATP-binding protein LptB | 0.89 | PFR28_05131 | | '23S rRNA (guanosine-2'-O-)-methyltransferase RlmB' transl_table=11 | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.85 | PFLU_RS06630 | | ABC transporter ATP-binding protein | 0.88 | PFLU_RS02630 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.85 | PFLU_RS06630 | | ABC transporter ATP-binding protein | 0.88 | PFLU_RS02630 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 109 |
| Pseudomonas simiae WCS417 | 0.85 | PS417_06600 | | leucine/isoleucine/valine transporter ATP-binding subunit | 0.88 | PS417_02560 | | 23S rRNA methyltransferase | 0.18 | 33 |
| Pseudomonas fluorescens FW300-N2E3 | 0.84 | AO353_17110 | | ABC transporter ATP-binding protein | 0.89 | AO353_13205 | | 23S rRNA methyltransferase | low | > 101 |
| Pseudomonas putida KT2440 | 0.83 | PP_1138 | | branched chain amino acid transporter - ATP binding subunit | 0.83 | PP_4879 | | 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB | low | > 96 |
| Erwinia tracheiphila SCR3 | 0.74 | LU632_RS19240 | livG | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.57 | LU632_RS21745 | rlmB | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 74 |
| Pantoea sp. MT58 | 0.73 | IAI47_01580 | | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.57 | IAI47_02630 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.72 | HER17_RS00510 | | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.58 | HER17_RS03840 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 75 |
| Rahnella sp. WP5 | 0.72 | EX31_RS14790 | | ABC transporter ATP-binding protein | 0.56 | EX31_RS08780 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 89 |
| Escherichia coli ECOR27 | 0.72 | NOLOHH_08550 | livG | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.57 | NOLOHH_04480 | rlmB | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 57 |
| Escherichia fergusonii Becca | 0.72 | EFB2_00367 | | Lipopolysaccharide export system ATP-binding protein LptB | 0.57 | EFB2_04355 | | 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB | low | > 86 |
| Escherichia coli BW25113 | 0.72 | b3455 | livG | leucine/isoleucine/valine transporter subunit (NCBI) | 0.57 | b4180 | rlmB | 23S rRNA (Gm2251)-methyltransferase (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 0.72 | HEPCGN_15575 | livG | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.57 | HEPCGN_10445 | rlmB | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 85 |
| Escherichia coli ECRC98 | 0.72 | JDDGAC_20385 | livG | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.57 | JDDGAC_15855 | rlmB | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | — | — |
| Escherichia coli ECRC99 | 0.72 | KEDOAH_11385 | livG | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.57 | KEDOAH_15940 | rlmB | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | — | — |
| Escherichia coli ECRC101 | 0.72 | MCAODC_07285 | livG | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.57 | MCAODC_02730 | rlmB | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | — | — |
| Dickeya dianthicola 67-19 | 0.72 | HGI48_RS20715 | | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.57 | HGI48_RS17310 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | — | — |
| Escherichia coli BL21 | 0.72 | ECD_03304 | | branched-chain amino acid ABC transporter ATPase | 0.57 | ECD_04047 | | 23S rRNA mG2251 2'-O-ribose methyltransferase, SAM-dependent | low | > 60 |
| Escherichia coli ECRC102 | 0.72 | NIAGMN_14525 | livG | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.57 | NIAGMN_10065 | rlmB | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.72 | OHPLBJKB_00248 | | Lipopolysaccharide export system ATP-binding protein LptB | 0.57 | OHPLBJKB_03862 | | '23S rRNA (guanosine-2'-O-)-methyltransferase RlmB' transl_table=11 | low | > 73 |
| Escherichia coli ECRC62 | 0.72 | BNILDI_02955 | livG | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.57 | BNILDI_07010 | rlmB | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | — | — |
| Enterobacter asburiae PDN3 | 0.72 | EX28DRAFT_4287 | | ABC-type branched-chain amino acid transport systems, ATPase component | 0.57 | EX28DRAFT_3377 | | rRNA methylase, putative, group 3 | low | > 76 |
| Escherichia coli ECRC101 | 0.72 | OKFHMN_16755 | livG | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.57 | OKFHMN_12215 | rlmB | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | — | — |
| Dickeya dadantii 3937 | 0.71 | DDA3937_RS00675 | | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.57 | DDA3937_RS17255 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 74 |
| Klebsiella michiganensis M5al | 0.71 | BWI76_RS26335 | | ABC transporter ATP-binding protein | 0.56 | BWI76_RS02580 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase | low | > 92 |
| Escherichia coli Nissle 1917 | 0.71 | ECOLIN_RS19760 | | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.57 | ECOLIN_RS24270 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 52 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.71 | GFF551 | | Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) | 0.56 | GFF833 | | '23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)' transl_table=11 | low | > 78 |
| Enterobacter sp. TBS_079 | 0.71 | MPMX20_04331 | | Lipopolysaccharide export system ATP-binding protein LptB | 0.57 | MPMX20_00461 | | 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB | low | > 85 |
| Serratia liquefaciens MT49 | 0.70 | IAI46_00975 | | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.57 | IAI46_01665 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 86 |
| Marinobacter adhaerens HP15 | 0.69 | HP15_3058 | | leucine/isoleucine/valine transporter ATP-binding subunit | 0.60 | HP15_623 | | RNA methyltransferase, TrmH family, group 3 | low | > 73 |
| Herbaspirillum seropedicae SmR1 | 0.68 | HSERO_RS08285 | | amino acid ABC transporter ATP-binding protein | 0.51 | HSERO_RS09295 | | 23S rRNA (guanosine-2'-O-)-methyltransferase | low | > 78 |
| Castellaniella sp019104865 MT123 | 0.63 | ABCV34_RS03630 | | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.48 | ABCV34_RS06630 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 48 |
| Cupriavidus basilensis FW507-4G11 | 0.63 | RR42_RS14410 | | leucine/isoleucine/valine transporter ATP-binding subunit | 0.51 | RR42_RS13060 | | 23S rRNA methyltransferase | low | > 128 |
| Azospirillum brasilense Sp245 | 0.53 | AZOBR_RS08245 | | L-proline and D-alanine ABC transporter, ATPase component 1 (from data) | 0.32 | AZOBR_RS11565 | | ribosomal large subunit pseudouridine synthase | low | > 97 |
| Rhodopseudomonas palustris CGA009 | 0.49 | TX73_019720 | | ABC transporter ATP-binding protein | 0.27 | TX73_017390 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 86 |
| Magnetospirillum magneticum AMB-1 | 0.49 | AMB_RS09125 | | ABC transporter ATP-binding protein | 0.36 | AMB_RS15870 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | — | — |
| Variovorax sp. OAS795 | 0.49 | ABID97_RS27570 | | ABC transporter ATP-binding protein | 0.47 | ABID97_RS14320 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 91 |
| Fusobacterium nucleatum SB010 | 0.47 | HUW76_08100 | | ABC transporter ATP-binding protein | 0.31 | HUW76_09335 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 35 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.46 | DVU0550 | livG | high-affinity branched-chain amino acid ABC transporter, ATP binding protein (TIGR) | 0.22 | DVU0042 | | RNA methyltransferase, TrmH family, group 3 (TIGR) | low | > 55 |
| Ralstonia sp. UNC404CL21Col | 0.46 | ABZR87_RS00300 | | ABC transporter ATP-binding protein | 0.54 | ABZR87_RS10990 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.46 | RPSI07_RS12705 | | ABC transporter ATP-binding protein | 0.54 | RPSI07_RS18025 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | 0.56 | 1 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.46 | GFF780 | | Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) | 0.47 | GFF4838 | | 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) | low | > 90 |
| Ralstonia solanacearum UW163 | 0.45 | UW163_RS08990 | | ABC transporter ATP-binding protein | 0.55 | UW163_RS12815 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | — | — |
| Acidovorax sp. GW101-3H11 | 0.45 | Ac3H11_1693 | | ABC transporter for glutamine/isoleucine/leucine/phenylalanine/proline/serine/tyrosine, ATPase component 1 (from data) | 0.47 | Ac3H11_4141 | | 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) | low | > 79 |
| Ralstonia solanacearum IBSBF1503 | 0.45 | RALBFv3_RS04680 | | ABC transporter ATP-binding protein | 0.55 | RALBFv3_RS15350 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | — | — |
| Variovorax sp. SCN45 | 0.45 | GFF7357 | | Phenylacetate ABC transporter, ATP-binding protein 1 | 0.47 | GFF1018 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase (EC 2.1.1.185) | low | > 127 |
| Ralstonia solanacearum GMI1000 | 0.45 | RS_RS12240 | | ABC transporter ATP-binding protein | 0.55 | RS_RS06160 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 80 |
| Dechlorosoma suillum PS | 0.44 | Dsui_0627 | | ABC-type branched-chain amino acid transport systems, ATPase component | 0.45 | Dsui_1899 | | rRNA methylase, putative, group 3 | low | > 51 |
| Paraburkholderia sabiae LMG 24235 | 0.44 | QEN71_RS03115 | | ABC transporter ATP-binding protein | 0.51 | QEN71_RS22920 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.42 | BPHYT_RS15595 | | ABC transporter | 0.51 | BPHYT_RS08460 | | 23S rRNA (guanosine-2'-O-)-methyltransferase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.41 | H281DRAFT_04060 | | amino acid/amide ABC transporter ATP-binding protein 1, HAAT family | 0.50 | H281DRAFT_00713 | | 23S rRNA Gm-2251 2'-O-methyltransferase | low | > 103 |
| Dinoroseobacter shibae DFL-12 | 0.41 | Dshi_0375 | | ABC transporter related (RefSeq) | 0.25 | Dshi_2571 | | RNA methyltransferase, TrmH family, group 3 (RefSeq) | low | > 64 |
| Phaeobacter inhibens DSM 17395 | 0.40 | PGA1_c32620 | | high-affinity branched-chain amino acid transport ATP-binding protein | 0.26 | PGA1_c09200 | | putative 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB | low | > 62 |
| Bosea sp. OAE506 | 0.38 | ABIE41_RS05945 | | ABC transporter ATP-binding protein | 0.26 | ABIE41_RS14185 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 77 |
| Shewanella loihica PV-4 | 0.34 | Shew_2611 | | ABC transporter-related protein (RefSeq) | 0.55 | Shew_3288 | | 23S rRNA (guanosine-2'-O-)-methyltransferase (RefSeq) | low | > 60 |
Not shown: 8 genomes with orthologs for Psest_1309 only; 23 genomes with orthologs for Psest_0692 only