Conservation of cofitness between PS417_26370 and PS417_02975 in Pseudomonas simiae WCS417

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_26370 RNA helicase 1.0 PS417_02975 3-dehydroquinate dehydratase 0.36 19
Pseudomonas fluorescens SBW25 1.00 PFLU_RS28020 ATP-dependent RNA helicase DbpA 0.99 PFLU_RS03050 type II 3-dehydroquinate dehydratase — —
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS28020 ATP-dependent RNA helicase DbpA 0.99 PFLU_RS03050 type II 3-dehydroquinate dehydratase — —
Pseudomonas fluorescens FW300-N2C3 0.95 AO356_13770 ATP-dependent RNA helicase 0.94 AO356_08185 3-dehydroquinate dehydratase — —
Pseudomonas fluorescens FW300-N2E2 0.95 Pf6N2E2_4673 ATP-dependent 23S rRNA helicase DbpA 0.92 Pf6N2E2_3510 3-dehydroquinate dehydratase II (EC 4.2.1.10) — —
Pseudomonas sp. RS175 0.94 PFR28_04172 ATP-dependent RNA helicase DbpA 0.92 PFR28_05222 3-dehydroquinate dehydratase 1 — —
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_2412 ATP-dependent 23S rRNA helicase DbpA 0.92 Pf1N1B4_1307 3-dehydroquinate dehydratase II (EC 4.2.1.10) low > 87
Pseudomonas fluorescens GW456-L13 0.93 PfGW456L13_1078 ATP-dependent 23S rRNA helicase DbpA 0.93 PfGW456L13_50 3-dehydroquinate dehydratase II (EC 4.2.1.10) low > 87
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_07850 ATP-dependent RNA helicase 0.92 AO353_13685 3-dehydroquinate dehydratase low > 101
Pseudomonas syringae pv. syringae B728a 0.88 Psyr_0516 ATP-dependent RNA helicase DbpA 0.91 Psyr_4399 3-dehydroquinate dehydratase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.88 Psyr_0516 ATP-dependent RNA helicase DbpA 0.91 Psyr_4399 3-dehydroquinate dehydratase — —
Pseudomonas putida KT2440 0.85 PP_4952 ATP-dependent RNA helicase, specific for 23S rRNA 0.89 PP_0560 3-dehydroquinate dehydratase 1, type II — —
Pseudomonas stutzeri RCH2 0.84 Psest_0344 Superfamily II DNA and RNA helicases 0.87 Psest_1021 3-dehydroquinate dehydratase, type II — —
Pseudomonas sp. S08-1 0.74 OH686_14770 ATP-dependent 23S rRNA helicase DbpA 0.92 OH686_07585 3-dehydroquinate dehydratase, type II low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.60 GFF5449 ATP-dependent 23S rRNA helicase DbpA 0.43 GFF5233 3-dehydroquinate dehydratase II (EC 4.2.1.10) — —
Ralstonia solanacearum GMI1000 0.59 RS_RS03120 ATP-dependent RNA helicase DbpA 0.62 RS_RS13930 3-dehydroquinate dehydratase 1 — —
Marinobacter adhaerens HP15 0.59 HP15_1329 DEAD/DEAH box helicase domain protein 0.65 HP15_3220 dehydroquinase, class II — —
Ralstonia solanacearum PSI07 0.59 RPSI07_RS20905 ATP-dependent RNA helicase DbpA 0.63 RPSI07_RS11260 type II 3-dehydroquinate dehydratase low > 81
Paraburkholderia sabiae LMG 24235 0.59 QEN71_RS00065 ATP-dependent RNA helicase DbpA 0.61 QEN71_RS27160 type II 3-dehydroquinate dehydratase low > 153
Serratia liquefaciens MT49 0.58 IAI46_14765 ATP-dependent RNA helicase DbpA 0.58 IAI46_22745 type II 3-dehydroquinate dehydratase — —
Paraburkholderia graminis OAS925 0.58 ABIE53_000368 ATP-independent RNA helicase DbpA 0.65 ABIE53_003566 3-dehydroquinate dehydratase-2 low > 113
Paraburkholderia bryophila 376MFSha3.1 0.58 H281DRAFT_02294 ATP-dependent RNA helicase DbpA 0.65 H281DRAFT_06285 3-dehydroquinate dehydratase low > 103
Ralstonia sp. UNC404CL21Col 0.58 ABZR87_RS19855 ATP-dependent RNA helicase DbpA 0.63 ABZR87_RS01645 type II 3-dehydroquinate dehydratase low > 80
Cupriavidus basilensis FW507-4G11 0.58 RR42_RS00295 DEAD/DEAH box helicase 0.67 RR42_RS17690 3-dehydroquinate dehydratase low > 128
Burkholderia phytofirmans PsJN 0.58 BPHYT_RS00150 DEAD/DEAH box helicase 0.65 BPHYT_RS17005 3-dehydroquinate dehydratase — —
Pectobacterium carotovorum WPP14 0.57 HER17_RS06775 ATP-dependent RNA helicase DbpA 0.57 HER17_RS20195 type II 3-dehydroquinate dehydratase low > 75
Dechlorosoma suillum PS 0.57 Dsui_2946 DNA/RNA helicase, superfamily II 0.64 Dsui_0387 3-dehydroquinate dehydratase, type II — —
Variovorax sp. SCN45 0.55 GFF7138 ATP-dependent 23S rRNA helicase DbpA 0.63 GFF7499 3-dehydroquinate dehydratase II (EC 4.2.1.10) — —
Rahnella sp. WP5 0.55 EX31_RS24740 ATP-dependent RNA helicase DbpA 0.58 EX31_RS12215 type II 3-dehydroquinate dehydratase low > 89
Dyella japonica UNC79MFTsu3.2 0.54 ABZR86_RS05195 ATP-dependent RNA helicase DbpA 0.64 ABZR86_RS17085 type II 3-dehydroquinate dehydratase low > 74
Shewanella amazonensis SB2B 0.53 Sama_0752 ATP-dependent RNA helicase DbpA (RefSeq) 0.60 Sama_3194 3-dehydroquinate dehydratase (RefSeq) 0.24 29
Shewanella sp. ANA-3 0.53 Shewana3_3384 ATP-dependent RNA helicase DbpA (RefSeq) 0.58 Shewana3_0511 3-dehydroquinate dehydratase (RefSeq) low > 73
Dickeya dadantii 3937 0.53 DDA3937_RS11045 ATP-dependent RNA helicase DbpA 0.55 DDA3937_RS01405 type II 3-dehydroquinate dehydratase — —
Shewanella oneidensis MR-1 0.53 SO0897 dbpA ATP-dependent RNA helicase DbpA (NCBI ptt file) 0.58 SO0512 aroQ 3-dehydroquinate dehydratase, type II (NCBI ptt file) low > 76
Dickeya dianthicola 67-19 0.53 HGI48_RS11065 ATP-dependent RNA helicase DbpA 0.54 HGI48_RS01325 type II 3-dehydroquinate dehydratase — —
Castellaniella sp019104865 MT123 0.53 ABCV34_RS04635 ATP-dependent RNA helicase DbpA 0.46 ABCV34_RS11545 type II 3-dehydroquinate dehydratase — —
Dickeya dianthicola ME23 0.53 DZA65_RS11470 ATP-dependent RNA helicase DbpA 0.54 DZA65_RS01385 type II 3-dehydroquinate dehydratase — —
Enterobacter asburiae PDN3 0.53 EX28DRAFT_1006 Superfamily II DNA and RNA helicases 0.63 EX28DRAFT_3306 3-dehydroquinate dehydratase (EC 4.2.1.10) — —
Shewanella loihica PV-4 0.53 Shew_0598 ATP-dependent RNA helicase DbpA (RefSeq) 0.61 Shew_3363 3-dehydroquinate dehydratase, type II (RefSeq) low > 60
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_16320 dbpA ATP-dependent RNA helicase DbpA 0.63 OKGIIK_16835 aroQ type II 3-dehydroquinate dehydratase low > 52
Enterobacter sp. TBS_079 0.52 MPMX20_02441 ATP-dependent RNA helicase DbpA 0.63 MPMX20_04162 3-dehydroquinate dehydratase low > 85
Rhodanobacter denitrificans MT42 0.52 LRK55_RS09695 ATP-dependent RNA helicase DbpA 0.62 LRK55_RS06540 type II 3-dehydroquinate dehydratase low > 63
Rhodanobacter denitrificans FW104-10B01 0.52 LRK54_RS10055 ATP-dependent RNA helicase DbpA 0.62 LRK54_RS06795 type II 3-dehydroquinate dehydratase low > 59
Vibrio cholerae E7946 ATCC 55056 0.51 CSW01_12980 ATP-dependent RNA helicase DbpA 0.62 CSW01_01515 type II 3-dehydroquinate dehydratase low > 62
Kangiella aquimarina DSM 16071 0.50 B158DRAFT_2047 ATP-dependent RNA helicase DbpA (EC 5.99.1.-) 0.59 B158DRAFT_0157 3-dehydroquinate dehydratase (EC 4.2.1.10) — —
Pantoea sp. MT58 0.50 IAI47_15055 ATP-dependent RNA helicase DbpA 0.59 IAI47_02415 type II 3-dehydroquinate dehydratase — —
Erwinia tracheiphila SCR3 0.50 LU632_RS11995 dbpA ATP-dependent RNA helicase DbpA 0.56 LU632_RS21475 aroQ type II 3-dehydroquinate dehydratase — —
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.2274.1 ATP-dependent 23S rRNA helicase DbpA 0.67 Xcc-8004.681.1 3-dehydroquinate dehydratase II (EC 4.2.1.10) — —
Lysobacter sp. OAE881 0.50 ABIE51_RS14930 ATP-dependent RNA helicase DbpA 0.66 ABIE51_RS17715 type II 3-dehydroquinate dehydratase low > 62
Alteromonas macleodii MIT1002 0.43 MIT1002_03748 ATP-independent RNA helicase DbpA 0.62 MIT1002_03941 3-dehydroquinate dehydratase — —

Not shown: 18 genomes with orthologs for PS417_26370 only; 14 genomes with orthologs for PS417_02975 only