| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 1.0 | GFF1390 | | General secretion pathway protein D | 1.0 | GFF5474 | | Epoxyqueuosine (oQ) reductase QueG | 0.52 | 15 |
| Acidovorax sp. GW101-3H11 | 0.52 | Ac3H11_2030 | | General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD) | 0.75 | Ac3H11_306 | | Epoxyqueuosine (oQ) reductase QueG | low | > 79 |
| Variovorax sp. SCN45 | 0.50 | GFF5235 | | General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD) | 0.69 | GFF4805 | | Epoxyqueuosine reductase (EC 1.17.99.6) QueG | low | > 127 |
| Variovorax sp. OAS795 | 0.50 | ABID97_RS06950 | | type II secretion system secretin GspD | 0.77 | ABID97_RS20285 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 91 |
| Ralstonia solanacearum PSI07 | 0.42 | RPSI07_RS09520 | | type II secretion system protein GspD | 0.64 | RPSI07_RS12175 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 81 |
| Ralstonia solanacearum IBSBF1503 | 0.42 | RALBFv3_RS07740 | | type II secretion system protein GspD | 0.64 | RALBFv3_RS05120 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 76 |
| Ralstonia solanacearum UW163 | 0.42 | UW163_RS05885 | | type II secretion system protein GspD | 0.64 | UW163_RS08505 | | tRNA epoxyqueuosine(34) reductase QueG | — | — |
| Ralstonia sp. UNC404CL21Col | 0.42 | ABZR87_RS03450 | | type II secretion system secretin GspD | 0.63 | ABZR87_RS00775 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 80 |
| Ralstonia solanacearum GMI1000 | 0.42 | RS_RS15640 | | type II secretion system protein GspD | 0.63 | RS_RS12740 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 80 |
| Cupriavidus basilensis FW507-4G11 | 0.41 | RR42_RS19520 | | general secretion pathway protein GspD | 0.64 | RR42_RS03405 | | epoxyqueuosine reductase | low | > 128 |
| Pseudomonas fluorescens FW300-N2E2 | 0.38 | Pf6N2E2_651 | | General secretion pathway protein D | 0.57 | Pf6N2E2_3620 | | Epoxyqueuosine (oQ) reductase QueG | low | > 103 |
| Pseudomonas sp. RS175 | 0.37 | PFR28_01750 | | Secretin XcpQ | 0.58 | PFR28_05115 | | Epoxyqueuosine reductase | low | > 88 |
| Pseudomonas fluorescens FW300-N2C3 | 0.37 | AO356_24790 | | type II secretion system protein GspD | 0.58 | AO356_08685 | | epoxyqueuosine reductase | low | > 104 |
| Pseudomonas simiae WCS417 | 0.37 | PS417_11295 | | general secretion pathway protein GspD | 0.58 | PS417_02460 | | epoxyqueuosine reductase | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.37 | PFLU_RS11890 | | type II secretion system secretin GspD | 0.57 | PFLU_RS02540 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.37 | PFLU_RS11890 | | type II secretion system secretin GspD | 0.57 | PFLU_RS02540 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 109 |
| Burkholderia phytofirmans PsJN | 0.35 | BPHYT_RS19595 | | general secretion pathway protein GspD | 0.61 | BPHYT_RS15960 | | iron-sulfur cluster binding protein | low | > 109 |
| Paraburkholderia graminis OAS925 | 0.34 | ABIE53_000295 | | general secretion pathway protein D | 0.62 | ABIE53_003363 | | epoxyqueuosine reductase | low | > 113 |
| Marinobacter adhaerens HP15 | 0.23 | HP15_2355 | | type II and III secretion system protein | 0.52 | HP15_2505 | | iron-sulfur cluster binding protein | low | > 73 |
| Acinetobacter radioresistens SK82 | 0.23 | MPMX26_00196 | | Secretin XcpQ | 0.48 | MPMX26_01783 | | Epoxyqueuosine reductase | low | > 36 |
| Pseudomonas sp. S08-1 | 0.23 | OH686_11840 | | type II secretion system protein D | 0.59 | OH686_09500 | | epoxyqueuosine reductase | low | > 80 |
| Caulobacter crescentus NA1000 Δfur | 0.21 | CCNA_00172 | | type II secretion pathway protein D | 0.35 | CCNA_03753 | | iron-sulfur cluster-binding protein | low | > 67 |
| Caulobacter crescentus NA1000 | 0.21 | CCNA_00172 | | type II secretion pathway protein D | 0.35 | CCNA_03753 | | iron-sulfur cluster-binding protein | low | > 66 |
| Kangiella aquimarina DSM 16071 | 0.21 | B158DRAFT_0689 | | general secretion pathway protein D | 0.44 | B158DRAFT_0486 | | iron-sulfur cluster binding protein, putative | low | > 40 |
| Pseudomonas stutzeri RCH2 | 0.20 | Psest_2577 | | general secretion pathway protein D | 0.57 | Psest_0677 | | iron-sulfur cluster binding protein, putative | low | > 67 |
| Pseudomonas fluorescens FW300-N2E3 | 0.20 | AO353_12545 | | type II secretion system protein GspD | 0.57 | AO353_13115 | | epoxyqueuosine reductase | low | > 101 |
| Pseudomonas fluorescens GW456-L13 | 0.20 | PfGW456L13_266 | | General secretion pathway protein D | 0.57 | PfGW456L13_160 | | Epoxyqueuosine (oQ) reductase QueG | low | > 87 |
| Sphingomonas koreensis DSMZ 15582 | 0.20 | Ga0059261_3945 | | type II secretion system protein D | 0.34 | Ga0059261_1058 | | epoxyqueuosine reductase | low | > 68 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.20 | OHPLBJKB_00739 | | Type II secretion system protein D | 0.55 | OHPLBJKB_03876 | | Epoxyqueuosine reductase | low | > 73 |
| Escherichia coli ECOR27 | 0.19 | NOLOHH_10975 | gspD | general secretion pathway protein D | 0.55 | NOLOHH_04550 | queG | tRNA epoxyqueuosine(34) reductase QueG | low | > 75 |
| Escherichia coli ECOR38 | 0.19 | HEPCGN_18050 | gspD | general secretion pathway protein D | 0.55 | HEPCGN_10515 | queG | tRNA epoxyqueuosine(34) reductase QueG | low | > 87 |
| Escherichia coli BL21 | 0.19 | ECD_02838 | | putative type II secretion protein GspD | 0.55 | ECD_04033 | | epoxyqueuosine reductase, cobalamine-stimulated; queosine biosynthesis | low | > 61 |
| Escherichia coli Nissle 1917 | 0.19 | ECOLIN_RS17085 | | type II secretion system secretin GspD | 0.55 | ECOLIN_RS24200 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 55 |
| Shewanella amazonensis SB2B | 0.19 | Sama_0169 | | type II and III secretion system protein (RefSeq) | 0.51 | Sama_2625 | | iron-sulfur cluster-binding protein (RefSeq) | low | > 62 |
| Escherichia fergusonii Becca | 0.19 | EFB2_00845 | | Secretin GspD 2 | 0.55 | EFB2_04369 | | Epoxyqueuosine reductase | low | > 86 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.19 | Xcc-8004.942.1 | | hypothetical protein | 0.57 | Xcc-8004.2252.1 | | Epoxyqueuosine (oQ) reductase QueG | low | > 74 |
| Alteromonas macleodii MIT1002 | 0.19 | MIT1002_03976 | | Pullulanase secretion envelope PulD | 0.55 | MIT1002_03794 | | Epoxyqueuosine reductase | low | > 70 |
| Shewanella loihica PV-4 | 0.18 | Shew_3619 | | general secretion pathway protein D (RefSeq) | 0.52 | Shew_2979 | | putative iron-sulfur cluster binding protein (RefSeq) | low | > 60 |
| Enterobacter asburiae PDN3 | 0.18 | EX28DRAFT_2079 | | type II secretion system protein D | 0.53 | EX28DRAFT_3363 | | epoxyqueuosine reductase | low | > 76 |
| Escherichia coli BW25113 | 0.18 | b3325 | yheF | putative general protein secretion protein (VIMSS) | 0.55 | b4166 | yjeS | predicted Fe-S electron transport protein (NCBI) | low | > 76 |
| Escherichia coli ECRC98 | 0.18 | JDDGAC_30295 | etpD | variant type II secretion system secretin EtpD | 0.55 | JDDGAC_15925 | queG | tRNA epoxyqueuosine(34) reductase QueG | low | > 86 |
| Escherichia coli ECRC100 | 0.18 | OKFHMN_00285 | etpD | variant type II secretion system secretin EtpD | 0.55 | OKFHMN_12285 | queG | tRNA epoxyqueuosine(34) reductase QueG | low | > 80 |
| Shewanella oneidensis MR-1 | 0.18 | SO0166 | gspD | general secretion pathway protein D (NCBI ptt file) | 0.51 | SO3861 | | iron-sulfur cluster-binding protein (NCBI ptt file) | low | > 76 |
| Escherichia coli ECRC101 | 0.18 | MCAODC_15265 | etpD | variant type II secretion system secretin EtpD | 0.55 | MCAODC_02800 | queG | tRNA epoxyqueuosine(34) reductase QueG | low | > 87 |
| Escherichia coli ECRC102 | 0.18 | NIAGMN_28605 | etpD | variant type II secretion system secretin EtpD | 0.55 | NIAGMN_10135 | queG | tRNA epoxyqueuosine(34) reductase QueG | — | — |
| Shewanella sp. ANA-3 | 0.18 | Shewana3_0151 | | general secretion pathway protein D (RefSeq) | 0.51 | Shewana3_0745 | | putative iron-sulfur cluster binding protein (RefSeq) | low | > 73 |
| Vibrio cholerae E7946 ATCC 55056 | 0.17 | CSW01_13790 | | type II secretion system protein GspD | 0.51 | CSW01_01810 | | tRNA epoxyqueuosine(34) reductase QueG | — | — |
| Rahnella sp. WP5 | 0.17 | EX31_RS16165 | | type II secretion system secretin GspD | 0.53 | EX31_RS08850 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 89 |
| Enterobacter sp. TBS_079 | 0.17 | MPMX20_01515 | | Putative secretin GspD | 0.53 | MPMX20_00447 | | Epoxyqueuosine reductase | low | > 85 |
| Klebsiella michiganensis M5al | 0.17 | BWI76_RS05090 | | type II secretion system protein GspD | 0.55 | BWI76_RS02505 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 92 |
| Dickeya dadantii 3937 | 0.17 | DDA3937_RS14800 | | type II secretion system secretin GspD | 0.53 | DDA3937_RS18645 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 74 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.16 | H281DRAFT_02356 | | general secretion pathway protein D | 0.61 | H281DRAFT_04128 | | epoxyqueuosine reductase | low | > 103 |
| Pectobacterium carotovorum WPP14 | 0.16 | HER17_RS06685 | | type II secretion system secretin GspD | 0.54 | HER17_RS02555 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 75 |
| Dickeya dianthicola ME23 | 0.14 | DZA65_RS16270 | | type II secretion system secretin GspD | 0.53 | DZA65_RS19710 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 75 |
| Dickeya dianthicola 67-19 | 0.14 | HGI48_RS15450 | | type II secretion system secretin GspD | 0.54 | HGI48_RS18575 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 71 |
| Dyella japonica UNC79MFTsu3.2 | 0.11 | ABZR86_RS13065 | | type II secretion system secretin GspD | 0.60 | ABZR86_RS00835 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 74 |
| Rhodanobacter denitrificans FW104-10B01 | 0.11 | LRK54_RS10010 | | type II secretion system secretin GspD | 0.57 | LRK54_RS15130 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.11 | LRK55_RS09650 | | type II secretion system secretin GspD | 0.57 | LRK55_RS14845 | | tRNA epoxyqueuosine(34) reductase QueG | low | > 63 |