Conservation of cofitness between PS417_04435 and PS417_25840 in Pseudomonas simiae WCS417

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_04435 uracil phosphoribosyltransferase 1.0 PS417_25840 SpoVR family protein 0.42 4
Pseudomonas fluorescens SBW25 0.98 PFLU_RS04485 uracil phosphoribosyltransferase 1.00 PFLU_RS27495 SpoVR family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS04485 uracil phosphoribosyltransferase 1.00 PFLU_RS27495 SpoVR family protein low > 109
Pseudomonas fluorescens FW300-N2E3 0.95 AO353_14855 uracil phosphoribosyltransferase 0.92 AO353_07345 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 101
Pseudomonas fluorescens GW456-L13 0.94 PfGW456L13_1597 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.93 PfGW456L13_1194 FIG004684: SpoVR-like protein low > 87
Pseudomonas fluorescens FW300-N2E2 0.94 Pf6N2E2_5235 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.92 Pf6N2E2_4799 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 103
Pseudomonas syringae pv. syringae B728a 0.94 Psyr_0969 uracil phosphoribosyltransferase 0.92 Psyr_4633 SpoVR low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.94 Psyr_0969 uracil phosphoribosyltransferase 0.92 Psyr_4633 SpoVR low > 86
Pseudomonas sp. RS175 0.93 PFR28_03641 Uracil phosphoribosyltransferase 0.95 PFR28_04070 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.93 AO356_16565 uracil phosphoribosyltransferase 0.94 AO356_14305 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 104
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_2934 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.93 Pf1N1B4_2521 FIG004684: SpoVR-like protein low > 87
Pseudomonas putida KT2440 0.93 PP_0746 Uracil phosphoribosyltransferase 0.86 PP_0395 putative type IV piliation protein low > 96
Pseudomonas sp. S08-1 0.92 OH686_17985 uracil phosphoribosyltransferase 0.87 OH686_15010 SpoVR-like protein low > 80
Pseudomonas stutzeri RCH2 0.90 Psest_1120 uracil phosphoribosyltransferase 0.84 Psest_3674 Uncharacterized conserved protein low > 67
Castellaniella sp019104865 MT123 0.82 ABCV34_RS15380 uracil phosphoribosyltransferase 0.12 ABCV34_RS05550 SpoVR family protein low > 48
Marinobacter adhaerens HP15 0.79 HP15_2306 uracil phosphoribosyltransferase 0.72 HP15_2935 SpoVR family protein low > 73
Klebsiella michiganensis M5al 0.74 BWI76_RS20945 uracil phosphoribosyltransferase 0.67 BWI76_RS17740 SpoVR family protein low > 92
Enterobacter asburiae PDN3 0.74 EX28DRAFT_0170 uracil phosphoribosyltransferase (EC 2.4.2.9) 0.67 EX28DRAFT_0765 Uncharacterized conserved protein low > 76
Enterobacter sp. TBS_079 0.74 MPMX20_03352 Uracil phosphoribosyltransferase 0.67 MPMX20_02700 hypothetical protein low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF2171 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.67 GFF2805 FIG004684: SpoVR-like protein low > 78
Escherichia coli ECRC62 0.73 BNILDI_12275 upp uracil phosphoribosyltransferase 0.66 BNILDI_18895 ycgB SpoVR family protein — —
Escherichia coli BW25113 0.73 b2498 upp uracil phosphoribosyltransferase (VIMSS) 0.66 b1188 ycgB ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 76
Escherichia coli ECRC98 0.73 JDDGAC_25760 upp uracil phosphoribosyltransferase 0.67 JDDGAC_06225 ycgB SpoVR family protein — —
Escherichia coli ECRC101 0.73 OKFHMN_21815 upp uracil phosphoribosyltransferase 0.67 OKFHMN_28285 ycgB SpoVR family protein — —
Escherichia coli ECRC99 0.73 KEDOAH_06405 upp uracil phosphoribosyltransferase 0.67 KEDOAH_25300 ycgB SpoVR family protein — —
Escherichia coli ECRC101 0.73 MCAODC_12345 upp uracil phosphoribosyltransferase 0.67 MCAODC_21885 ycgB SpoVR family protein — —
Escherichia coli ECRC102 0.73 NIAGMN_19585 upp uracil phosphoribosyltransferase 0.67 NIAGMN_27935 ycgB SpoVR family protein — —
Escherichia coli ECOR38 0.73 HEPCGN_20980 upp uracil phosphoribosyltransferase 0.66 HEPCGN_24745 ycgB SpoVR family protein low > 85
Escherichia coli Nissle 1917 0.73 ECOLIN_RS14185 uracil phosphoribosyltransferase 0.67 ECOLIN_RS07180 SpoVR family protein — —
Escherichia coli BL21 0.73 ECD_02390 uracil phosphoribosyltransferase 0.66 ECD_01163 SpoVR family stationary phase protein low > 60
Escherichia coli ECOR27 0.73 NOLOHH_13465 upp uracil phosphoribosyltransferase 0.66 NOLOHH_20730 ycgB SpoVR family protein low > 57
Escherichia fergusonii Becca 0.73 EFB2_01400 Uracil phosphoribosyltransferase 0.67 EFB2_02744 hypothetical protein low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_01228 Uracil phosphoribosyltransferase 0.66 OHPLBJKB_02501 hypothetical protein low > 73
Dickeya dianthicola 67-19 0.73 HGI48_RS06075 uracil phosphoribosyltransferase 0.67 HGI48_RS11200 SpoVR family protein low > 71
Serratia liquefaciens MT49 0.73 IAI46_18880 uracil phosphoribosyltransferase 0.67 IAI46_14470 SpoVR family protein low > 86
Shewanella amazonensis SB2B 0.73 Sama_2096 upp uracil phosphoribosyltransferase (RefSeq) 0.69 Sama_1923 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 62
Dickeya dadantii 3937 0.72 DDA3937_RS06030 uracil phosphoribosyltransferase 0.68 DDA3937_RS11175 SpoVR family protein low > 74
Dickeya dianthicola ME23 0.72 DZA65_RS06425 uracil phosphoribosyltransferase 0.67 DZA65_RS11545 SpoVR family protein low > 75
Pantoea sp. MT58 0.72 IAI47_05185 uracil phosphoribosyltransferase 0.67 IAI47_08885 SpoVR family protein low > 76
Pectobacterium carotovorum WPP14 0.72 HER17_RS15460 uracil phosphoribosyltransferase 0.68 HER17_RS11210 SpoVR family protein low > 75
Erwinia tracheiphila SCR3 0.71 LU632_RS08280 upp uracil phosphoribosyltransferase 0.67 LU632_RS13075 SpoVR family protein low > 74
Rahnella sp. WP5 0.71 EX31_RS22700 uracil phosphoribosyltransferase 0.67 EX31_RS10500 SpoVR family protein low > 89
Shewanella sp. ANA-3 0.70 Shewana3_2544 upp uracil phosphoribosyltransferase (RefSeq) 0.67 Shewana3_1636 SpoVR family protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.70 SO2759 upp uracil phosphoribosyltransferase (NCBI ptt file) 0.67 SO2884 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 76
Vibrio cholerae E7946 ATCC 55056 0.70 CSW01_11345 uracil phosphoribosyltransferase 0.68 CSW01_09390 SpoVR family protein low > 62
Shewanella loihica PV-4 0.70 Shew_1514 upp uracil phosphoribosyltransferase (RefSeq) 0.67 Shew_1831 hypothetical protein (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.67 MIT1002_02893 Uracil phosphoribosyltransferase 0.67 MIT1002_01231 SpoVR family protein low > 70
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS30815 uracil phosphoribosyltransferase 0.67 RR42_RS36475 SpoVR family protein 0.36 7
Acidovorax sp. GW101-3H11 0.51 Ac3H11_2428 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.63 Ac3H11_1147 FIG004684: SpoVR-like protein low > 79
Sinorhizobium meliloti 1021 0.51 SMc04121 uracil phosphoribosyltransferase 0.50 SMc01265 SpoVR family protein low > 103
Rhizobium sp. OAE497 0.50 ABIE40_RS00825 uracil phosphoribosyltransferase 0.47 ABIE40_RS12540 SpoVR family protein low > 107
Phaeobacter inhibens DSM 17395 0.50 PGA1_c11960 uracil phosphoribosyltransferase Upp 0.48 PGA1_c02490 sporulation protein R-like protein low > 62
Variovorax sp. SCN45 0.50 GFF324 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.65 GFF2935 FIG004684: SpoVR-like protein low > 127
Paraburkholderia sabiae LMG 24235 0.48 QEN71_RS24390 uracil phosphoribosyltransferase 0.65 QEN71_RS07385 SpoVR family protein low > 153
Azospirillum brasilense Sp245 0.47 AZOBR_RS03150 uracil phosphoribosyltransferase 0.49 AZOBR_RS12645 SpoVR family protein low > 97
Burkholderia phytofirmans PsJN 0.47 BPHYT_RS06415 uracil phosphoribosyltransferase 0.65 BPHYT_RS11180 SpoVR family protein low > 109
Azospirillum sp. SherDot2 0.47 MPMX19_02205 Uracil phosphoribosyltransferase 0.47 MPMX19_02155 hypothetical protein low > 112
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS15395 uracil phosphoribosyltransferase 0.65 ABZR87_RS14210 SpoVR family protein low > 80
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_04523 uracil phosphoribosyltransferase 0.65 H281DRAFT_05234 Stage V sporulation protein SpoVR/YcgB, involved in spore cortex formation low > 103
Paraburkholderia graminis OAS925 0.46 ABIE53_001547 uracil phosphoribosyltransferase 0.65 ABIE53_002316 stage V sporulation protein R low > 113
Herbaspirillum seropedicae SmR1 0.46 HSERO_RS03500 uracil phosphoribosyltransferase 0.66 HSERO_RS21700 SpoVR family protein low > 78
Pontibacter actiniarum KMM 6156, DSM 19842 0.24 CA264_14760 uracil phosphoribosyltransferase 0.48 CA264_07090 SpoVR family protein low > 74

Not shown: 37 genomes with orthologs for PS417_04435 only; 1 genomes with orthologs for PS417_25840 only