Conservation of cofitness between Psest_3438 and Psest_0508 in Pseudomonas stutzeri RCH2

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3438 Glutamate dehydrogenase/leucine dehydrogenase 1.0 Psest_0508 gamma-glutamyl phosphate reductase 0.31 15
Pseudomonas sp. SVBP6 0.85 COO64_RS03010 gdhA NADP-specific glutamate dehydrogenase 0.75 COO64_RS15630 glutamate-5-semialdehyde dehydrogenase low > 93
Pseudomonas aeruginosa PA14 0.85 IKLFDK_00575 NADP-specific glutamate dehydrogenase 0.85 IKLFDK_20665 glutamate-5-semialdehyde dehydrogenase low > 100
Pseudomonas putida KT2440 0.84 PP_0675 glutamate dehydrogenase, NADP-dependent 0.73 PP_4811 Gamma-glutamyl phosphate reductase low > 96
Pseudomonas simiae WCS417 0.84 PS417_24260 glutamate dehydrogenase 0.85 PS417_24745 gamma-glutamyl phosphate reductase low > 88
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS26175 NADP-specific glutamate dehydrogenase 0.85 PFLU_RS26675 glutamate-5-semialdehyde dehydrogenase — —
Pseudomonas fluorescens SBW25 0.84 PFLU_RS26175 NADP-specific glutamate dehydrogenase 0.85 PFLU_RS26675 glutamate-5-semialdehyde dehydrogenase — —
Pseudomonas sp. BP01 0.84 JOY50_RS24645 gdhA NADP-specific glutamate dehydrogenase 0.71 JOY50_RS17680 glutamate-5-semialdehyde dehydrogenase low > 84
Pseudomonas sp. DMC3 0.84 GFF3966 NADP-specific glutamate dehydrogenase 0.73 GFF3876 Gamma-glutamyl phosphate reductase low > 89
Pseudomonas fluorescens GW456-L13 0.83 PfGW456L13_1455 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) 0.72 PfGW456L13_1356 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) low > 87
Pseudomonas lactucae CFBP13502 0.83 GEMAOFIL_04998 NADP-specific glutamate dehydrogenase 0.86 GEMAOFIL_05102 Gamma-glutamyl phosphate reductase — —
Dechlorosoma suillum PS 0.75 Dsui_3211 glutamate dehydrogenase/leucine dehydrogenase 0.64 Dsui_1220 gamma-glutamyl phosphate reductase — —
Acinetobacter radioresistens SK82 0.70 MPMX26_02304 NADP-specific glutamate dehydrogenase 0.68 MPMX26_00417 Gamma-glutamyl phosphate reductase low > 36
Acinetobacter baumannii LAC-4 0.69 RR41_RS09055 NADP-specific glutamate dehydrogenase 0.66 RR41_RS16505 glutamate-5-semialdehyde dehydrogenase low > 55
Klebsiella pneumoniae MKP103 0.68 KDGMDA_19295 NADP-specific glutamate dehydrogenase 0.47 KDGMDA_14000 glutamate-5-semialdehyde dehydrogenase low > 95
Castellaniella sp019104865 MT123 0.68 ABCV34_RS06190 NADP-specific glutamate dehydrogenase 0.57 ABCV34_RS00845 glutamate-5-semialdehyde dehydrogenase — —
Klebsiella michiganensis M5al 0.68 BWI76_RS11610 glutamate dehydrogenase 0.46 BWI76_RS05835 gamma-glutamyl-phosphate reductase low > 92
Cupriavidus basilensis FW507-4G11 0.67 RR42_RS33640 glutamate dehydrogenase 0.62 RR42_RS17530 gamma-glutamyl phosphate reductase low > 128
Pectobacterium carotovorum WPP14 0.67 HER17_RS21320 NADP-specific glutamate dehydrogenase 0.43 HER17_RS04705 glutamate-5-semialdehyde dehydrogenase low > 75
Enterobacter asburiae PDN3 0.67 EX28DRAFT_1763 Glutamate dehydrogenase/leucine dehydrogenase 0.45 EX28DRAFT_2650 glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) low > 76
Escherichia coli BL21 0.67 ECD_01730 glutamate dehydrogenase, NADP-specific 0.45 ECD_00240 gamma-glutamylphosphate reductase — —
Rahnella sp. WP5 0.67 EX31_RS08255 NADP-specific glutamate dehydrogenase 0.46 EX31_RS20975 glutamate-5-semialdehyde dehydrogenase low > 89
Cellulophaga baltica 18 0.67 M666_RS03780 NADP-specific glutamate dehydrogenase 0.29 M666_RS02645 glutamate-5-semialdehyde dehydrogenase low > 67
Escherichia coli ECRC102 0.67 NIAGMN_01225 gdhA NADP-specific glutamate dehydrogenase 0.45 NIAGMN_07530 proA glutamate-5-semialdehyde dehydrogenase low > 80
Escherichia coli ECRC98 0.67 JDDGAC_01415 gdhA NADP-specific glutamate dehydrogenase 0.45 JDDGAC_13295 proA glutamate-5-semialdehyde dehydrogenase low > 87
Escherichia coli ECRC100 0.67 OKFHMN_26840 gdhA NADP-specific glutamate dehydrogenase 0.45 OKFHMN_09670 proA glutamate-5-semialdehyde dehydrogenase 0.69 9
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_01971 NADP-specific glutamate dehydrogenase 0.44 OHPLBJKB_03397 Gamma-glutamyl phosphate reductase low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.67 GFF3487 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) 0.45 GFF4115 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) low > 78
Escherichia coli ECRC99 0.67 KEDOAH_01270 gdhA NADP-specific glutamate dehydrogenase 0.45 KEDOAH_18485 proA glutamate-5-semialdehyde dehydrogenase — —
Escherichia coli BW25113 0.67 b1761 gdhA glutamate dehydrogenase (NCBI) 0.44 b0243 proA gamma-glutamyl phosphate reductase (NCBI) low > 76
Escherichia coli ECRC101 0.67 MCAODC_18570 gdhA NADP-specific glutamate dehydrogenase 0.45 MCAODC_00190 proA glutamate-5-semialdehyde dehydrogenase 0.29 76
Escherichia coli ECRC62 0.66 BNILDI_16140 gdhA NADP-specific glutamate dehydrogenase 0.44 BNILDI_00240 proA glutamate-5-semialdehyde dehydrogenase low > 75
Escherichia coli ECOR27 0.66 NOLOHH_17355 gdhA NADP-specific glutamate dehydrogenase 0.44 NOLOHH_02045 proA glutamate-5-semialdehyde dehydrogenase low > 76
Enterobacter sp. TBS_079 0.66 MPMX20_01854 NADP-specific glutamate dehydrogenase 0.46 MPMX20_00928 Gamma-glutamyl phosphate reductase 0.30 35
Escherichia fergusonii Becca 0.66 EFB2_02232 NADP-specific glutamate dehydrogenase 0.44 EFB2_03777 Gamma-glutamyl phosphate reductase low > 86
Escherichia coli ECOR38 0.66 HEPCGN_05205 gdhA NADP-specific glutamate dehydrogenase 0.45 HEPCGN_07775 proA glutamate-5-semialdehyde dehydrogenase low > 88
Escherichia coli Nissle 1917 0.66 ECOLIN_RS09810 NADP-specific glutamate dehydrogenase 0.45 ECOLIN_RS01830 glutamate-5-semialdehyde dehydrogenase — —
Acidovorax sp. GW101-3H11 0.66 Ac3H11_315 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) 0.62 Ac3H11_704 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) low > 79
Serratia liquefaciens MT49 0.66 IAI46_24165 NADP-specific glutamate dehydrogenase 0.45 IAI46_04435 glutamate-5-semialdehyde dehydrogenase low > 86
Variovorax sp. SCN45 0.66 GFF3009 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) 0.60 GFF6326 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.66 GFF5486 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) 0.59 GFF2641 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) low > 90
Phocaeicola dorei CL03T12C01 0.63 ABI39_RS01300 NADP-specific glutamate dehydrogenase 0.33 ABI39_RS02875 glutamate-5-semialdehyde dehydrogenase 0.58 58
Phocaeicola vulgatus CL09T03C04 0.63 HMPREF1058_RS02115 NADP-specific glutamate dehydrogenase 0.33 HMPREF1058_RS08645 glutamate-5-semialdehyde dehydrogenase 0.73 32
Bacteroides thetaiotaomicron VPI-5482 0.63 BT1970 glutamate dehydrogenase (NCBI ptt file) 0.33 BT3718 gamma-glutamyl phosphate reductase (NCBI ptt file) 0.90 3
Bacteroides ovatus ATCC 8483 0.62 BACOVA_00094 NAD(P)-specific glutamate dehydrogenase 0.33 BACOVA_03534 glutamate-5-semialdehyde dehydrogenase 0.77 47
Parabacteroides merdae CL09T00C40 0.62 HMPREF1078_RS13375 NADP-specific glutamate dehydrogenase 0.33 HMPREF1078_RS10655 glutamate-5-semialdehyde dehydrogenase low > 61
Bacteroides stercoris CC31F 0.62 HMPREF1181_RS07835 NADP-specific glutamate dehydrogenase 0.35 HMPREF1181_RS03320 glutamate-5-semialdehyde dehydrogenase low > 56
Bifidobacterium breve UCC2003 0.58 BBR_RS10310 NADP-specific glutamate dehydrogenase 0.41 BBR_RS14075 glutamate-5-semialdehyde dehydrogenase low > 34
Sinorhizobium meliloti 1021 0.56 SMa0228 glutamate dehydrogenase 0.45 SMc03777 gamma-glutamyl phosphate reductase low > 103
Alteromonas macleodii MIT1002 0.53 MIT1002_01876 NAD-specific glutamate dehydrogenase 0.45 MIT1002_01885 Gamma-glutamyl phosphate reductase low > 70
Dinoroseobacter shibae DFL-12 0.49 Dshi_3841 Glutamate dehydrogenase (NADP(+)) (RefSeq) 0.44 Dshi_1469 gamma-glutamyl phosphate reductase (RefSeq) — —
Ralstonia solanacearum PSI07 0.21 RPSI07_RS21660 Glu/Leu/Phe/Val dehydrogenase 0.67 RPSI07_RS11475 glutamate-5-semialdehyde dehydrogenase low > 81
Ralstonia solanacearum GMI1000 0.20 RS_RS02380 Glu/Leu/Phe/Val dehydrogenase 0.67 RS_RS13715 gamma-glutamyl-phosphate reductase — —
Ralstonia solanacearum IBSBF1503 0.20 RALBFv3_RS11550 Glu/Leu/Phe/Val dehydrogenase 0.68 RALBFv3_RS05825 glutamate-5-semialdehyde dehydrogenase — —
Ralstonia solanacearum UW163 0.20 UW163_RS02035 Glu/Leu/Phe/Val dehydrogenase 0.68 UW163_RS07800 glutamate-5-semialdehyde dehydrogenase — —
Variovorax sp. OAS795 0.20 ABID97_RS00235 Glu/Leu/Phe/Val dehydrogenase 0.58 ABID97_RS04600 glutamate-5-semialdehyde dehydrogenase — —
Paraburkholderia sabiae LMG 24235 0.20 QEN71_RS26890 Glu/Leu/Phe/Val dehydrogenase 0.64 QEN71_RS26940 glutamate-5-semialdehyde dehydrogenase — —
Ralstonia sp. UNC404CL21Col 0.20 ABZR87_RS07515 Glu/Leu/Phe/Val dehydrogenase 0.68 ABZR87_RS01395 glutamate-5-semialdehyde dehydrogenase — —
Burkholderia phytofirmans PsJN 0.20 BPHYT_RS16705 glutamate dehydrogenase 0.62 BPHYT_RS16770 gamma-glutamyl phosphate reductase — —
Pantoea agglomerans CFBP13505 P0401 0.20 PagCFBP13505_RS08470 Glu/Leu/Phe/Val dehydrogenase 0.43 PagCFBP13505_RS10045 glutamate-5-semialdehyde dehydrogenase — —
Pantoea sp. MT58 0.20 IAI47_20110 Glu/Leu/Phe/Val dehydrogenase 0.42 IAI47_15115 glutamate-5-semialdehyde dehydrogenase low > 76
Paraburkholderia graminis OAS925 0.20 ABIE53_003511 glutamate dehydrogenase (NAD(P)+) 0.60 ABIE53_003523 glutamate-5-semialdehyde dehydrogenase 0.54 8
Paraburkholderia bryophila 376MFSha3.1 0.19 H281DRAFT_04271 glutamate dehydrogenase (NAD(P)+) 0.62 H281DRAFT_06324 glutamate-5-semialdehyde dehydrogenase — —
Erwinia tracheiphila SCR3 0.19 LU632_RS12465 Glu/Leu/Phe/Val dehydrogenase 0.45 LU632_RS01190 proA glutamate-5-semialdehyde dehydrogenase low > 74
Erwinia tracheiphila HP pepo 2.2 0.19 IJEDHG_23815 glutamate dehydrogenase 0.45 IJEDHG_15495 proA glutamate-5-semialdehyde dehydrogenase low > 61
Echinicola vietnamensis KMM 6221, DSM 17526 0.19 Echvi_1535 Glutamate dehydrogenase/leucine dehydrogenase 0.29 Echvi_2633 gamma-glutamylphosphate reductase (EC 1.2.1.41) (from data) low > 79
Synechocystis sp000284455 PCC 6803 0.19 SGL_RS16330 NADP-specific glutamate dehydrogenase 0.44 SGL_RS14505 glutamate-5-semialdehyde dehydrogenase low > 52
Erwinia amylovora T8 0.19 OLJFJH_14210 glutamate dehydrogenase 0.45 OLJFJH_18405 glutamate-5-semialdehyde dehydrogenase low > 58
Herbaspirillum seropedicae SmR1 0.19 HSERO_RS19260 glutamate dehydrogenase 0.64 HSERO_RS02965 gamma-glutamyl phosphate reductase — —
Azospirillum brasilense Sp245 0.18 AZOBR_RS22625 glutamate dehydrogenase 0.45 AZOBR_RS04075 gamma-glutamyl phosphate reductase — —
Kangiella aquimarina DSM 16071 0.15 B158DRAFT_0910 Glutamate dehydrogenase/leucine dehydrogenase 0.42 B158DRAFT_1470 glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) low > 40

Not shown: 1 genomes with orthologs for Psest_3438 only; 47 genomes with orthologs for Psest_0508 only