| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 1.0 | GFF4264 | | 2-methylcitrate synthase (EC 2.3.3.5) | 1.0 | GFF4612 | | Deoxyribodipyrimidine photolyase (EC 4.1.99.3) | 0.53 | 8 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.94 | OHPLBJKB_03338 | | 2-methylcitrate synthase | 0.82 | OHPLBJKB_03009 | | Deoxyribodipyrimidine photo-lyase | low | > 73 |
| Escherichia coli BL21 | 0.94 | ECD_00287 | | 2-methylcitrate synthase | 0.82 | ECD_00668 | | deoxyribodipyrimidine photolyase, FAD-binding | 0.49 | 22 |
| Escherichia coli ECOR27 | 0.94 | NOLOHH_01770 | prpC | 2-methylcitrate synthase | 0.81 | NOLOHH_23405 | phrB | deoxyribodipyrimidine photo-lyase | low | > 75 |
| Escherichia coli BW25113 | 0.94 | b0333 | prpC | 2-methylcitrate synthase (NCBI) | 0.82 | b0708 | phr | deoxyribodipyrimidine photolyase, FAD-binding (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 0.94 | HEPCGN_07480 | prpC | 2-methylcitrate synthase | 0.82 | HEPCGN_01190 | phrB | deoxyribodipyrimidine photo-lyase | low | > 87 |
| Escherichia coli ECRC102 | 0.94 | NIAGMN_06950 | prpC | 2-methylcitrate synthase | 0.82 | NIAGMN_05080 | phrB | deoxyribodipyrimidine photo-lyase | — | — |
| Escherichia coli ECRC100 | 0.94 | OKFHMN_08895 | prpC | 2-methylcitrate synthase | 0.82 | OKFHMN_07025 | phrB | deoxyribodipyrimidine photo-lyase | low | > 80 |
| Escherichia coli ECRC98 | 0.94 | JDDGAC_12550 | prpC | 2-methylcitrate synthase | 0.82 | JDDGAC_10680 | phrB | deoxyribodipyrimidine photo-lyase | low | > 86 |
| Escherichia coli ECRC99 | 0.94 | KEDOAH_19070 | prpC | 2-methylcitrate synthase | 0.82 | KEDOAH_20940 | phrB | deoxyribodipyrimidine photo-lyase | — | — |
| Escherichia coli ECRC101 | 0.94 | MCAODC_28125 | prpC | 2-methylcitrate synthase | 0.82 | MCAODC_26245 | phrB | deoxyribodipyrimidine photo-lyase | low | > 87 |
| Escherichia coli ECRC62 | 0.94 | BNILDI_23185 | prpC | 2-methylcitrate synthase | 0.81 | BNILDI_21400 | phrB | deoxyribodipyrimidine photo-lyase | low | > 75 |
| Escherichia fergusonii Becca | 0.94 | EFB2_03705 | | 2-methylcitrate synthase | 0.82 | EFB2_03395 | | Deoxyribodipyrimidine photo-lyase | low | > 86 |
| Escherichia coli Nissle 1917 | 0.94 | ECOLIN_RS02155 | | 2-methylcitrate synthase | 0.82 | ECOLIN_RS03790 | | deoxyribodipyrimidine photo-lyase | low | > 55 |
| Herbaspirillum seropedicae SmR1 | 0.81 | HSERO_RS15655 | | methylcitrate synthase | 0.30 | HSERO_RS09280 | | deoxyribodipyrimidine photo-lyase | low | > 78 |
| Burkholderia phytofirmans PsJN | 0.79 | BPHYT_RS30150 | | methylcitrate synthase | 0.32 | BPHYT_RS33665 | | deoxyribodipyrimidine photo-lyase | low | > 109 |
| Paraburkholderia graminis OAS925 | 0.78 | ABIE53_005042 | | 2-methylcitrate synthase | 0.32 | ABIE53_004843 | | deoxyribodipyrimidine photo-lyase | low | > 113 |
| Azospirillum brasilense Sp245 | 0.78 | AZOBR_RS24300 | | methylcitrate synthase | 0.28 | AZOBR_RS09290 | | deoxyribodipyrimidine photo-lyase | low | > 97 |
| Variovorax sp. OAS795 | 0.78 | ABID97_RS19380 | | 2-methylcitrate synthase | 0.30 | ABID97_RS24680 | | deoxyribodipyrimidine photo-lyase | low | > 91 |
| Ralstonia sp. UNC404CL21Col | 0.78 | ABZR87_RS16740 | | 2-methylcitrate synthase | 0.30 | ABZR87_RS08600 | | deoxyribodipyrimidine photo-lyase | low | > 80 |
| Paraburkholderia sabiae LMG 24235 | 0.78 | QEN71_RS17550 | | 2-methylcitrate synthase | 0.32 | QEN71_RS17830 | | deoxyribodipyrimidine photo-lyase | low | > 153 |
| Variovorax sp. SCN45 | 0.78 | GFF271 | | 2-methylcitrate synthase (EC 2.3.3.5) | 0.29 | GFF2156 | | Deoxyribodipyrimidine photolyase (EC 4.1.99.3) | low | > 127 |
| Acidovorax sp. GW101-3H11 | 0.78 | Ac3H11_2322 | | 2-methylcitrate synthase (EC 2.3.3.5) | 0.28 | Ac3H11_3983 | | Deoxyribodipyrimidine photolyase (EC 4.1.99.3) | low | > 79 |
| Ralstonia solanacearum IBSBF1503 | 0.78 | RALBFv3_RS22825 | | 2-methylcitrate synthase | 0.30 | RALBFv3_RS12600 | | deoxyribodipyrimidine photo-lyase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.78 | RR42_RS11265 | | methylcitrate synthase | 0.31 | RR42_RS15885 | | deoxyribodipyrimidine photolyase | — | — |
| Ralstonia solanacearum UW163 | 0.78 | UW163_RS23445 | | 2-methylcitrate synthase | 0.30 | UW163_RS00965 | | deoxyribodipyrimidine photo-lyase | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.76 | Xcc-8004.3980.1 | | 2-methylcitrate synthase (EC 2.3.3.5) | 0.25 | Xcc-8004.3484.1 | | Deoxyribodipyrimidine photolyase (EC 4.1.99.3) | low | > 74 |
| Pseudomonas sp. S08-1 | 0.76 | OH686_01685 | | 2-methylcitrate synthase | 0.38 | OH686_07850 | | Deoxyribodipyrimidine photolyase | low | > 80 |
| Kangiella aquimarina DSM 16071 | 0.72 | B158DRAFT_1344 | | 2-methylcitrate synthase (EC 2.3.3.5) | 0.35 | B158DRAFT_0621 | | Deoxyribodipyrimidine photolyase | low | > 40 |
| Rhodospirillum rubrum S1H | 0.71 | Rru_A2319 | | 2-methylcitrate synthase/citrate synthase II (NCBI) | 0.27 | Rru_A2903 | | Deoxyribodipyrimidine photolyase (NCBI) | low | > 58 |
| Dyella japonica UNC79MFTsu3.2 | 0.70 | ABZR86_RS08475 | | 2-methylcitrate synthase | 0.27 | ABZR86_RS01855 | | deoxyribodipyrimidine photo-lyase | low | > 74 |
| Rhodanobacter sp. FW510-T8 | 0.69 | OKGIIK_06570 | | Citrate synthase | 0.24 | OKGIIK_13930 | | Deoxyribodipyrimidine photolyase | low | > 52 |
| Rhodanobacter denitrificans FW104-10B01 | 0.69 | LRK54_RS00690 | | 2-methylcitrate synthase | 0.24 | LRK54_RS07510 | | DNA photolyase family protein | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.69 | LRK55_RS00465 | | 2-methylcitrate synthase | 0.24 | LRK55_RS07250 | | deoxyribodipyrimidine photo-lyase | low | > 63 |
| Lysobacter sp. OAE881 | 0.68 | ABIE51_RS06020 | | 2-methylcitrate synthase | 0.25 | ABIE51_RS09260 | | deoxyribodipyrimidine photo-lyase | low | > 62 |
| Marinobacter adhaerens HP15 | 0.55 | HP15_1931 | | 2-methylcitrate synthase/citrate synthase II | 0.41 | HP15_715 | | deoxyribodipyrimidine photolyase | low | > 73 |
| Alteromonas macleodii MIT1002 | 0.54 | MIT1002_03130 | | 2-methylcitrate synthase | 0.28 | MIT1002_02045 | | Deoxyribodipyrimidine photo-lyase | low | > 70 |
| Acinetobacter radioresistens SK82 | 0.53 | MPMX26_01290 | | 2-methylcitrate synthase | 0.35 | MPMX26_01004 | | Deoxyribodipyrimidine photo-lyase | — | — |
| Pseudomonas putida KT2440 | 0.53 | PP_2335 | | methylcitrate synthase | 0.39 | PP_0739 | | deoxyribodipyrimidine photolyase | low | > 96 |
| Pseudomonas sp. RS175 | 0.52 | PFR28_02927 | | 2-methylcitrate synthase | 0.39 | PFR28_03648 | | Deoxyribodipyrimidine photo-lyase | low | > 88 |
| Pseudomonas stutzeri RCH2 | 0.52 | Psest_2320 | | 2-methylcitrate synthase/citrate synthase II | 0.40 | Psest_2397 | | Deoxyribodipyrimidine photolyase | low | > 67 |
| Pseudomonas simiae WCS417 | 0.52 | PS417_21075 | | methylcitrate synthase | 0.40 | PS417_03665 | | deoxyribodipyrimidine photolyase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.52 | Pf6N2E2_6062 | | 2-methylcitrate synthase (EC 2.3.3.5) (from data) | 0.41 | Pf6N2E2_5228 | | Deoxyribodipyrimidine photolyase (EC 4.1.99.3) | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.51 | AO356_20870 | | 2-methylcitrate synthase | 0.39 | AO356_16530 | | deoxyribodipyrimidine photolyase | low | > 104 |
| Pseudomonas fluorescens FW300-N1B4 | 0.51 | Pf1N1B4_3820 | | 2-methylcitrate synthase (EC 2.3.3.5) | 0.39 | Pf1N1B4_2927 | | Deoxyribodipyrimidine photolyase (EC 4.1.99.3) | low | > 87 |
| Pseudomonas fluorescens SBW25-INTG | 0.51 | PFLU_RS22685 | | 2-methylcitrate synthase | 0.41 | PFLU_RS03715 | | deoxyribodipyrimidine photo-lyase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.51 | PFLU_RS22685 | | 2-methylcitrate synthase | 0.41 | PFLU_RS03715 | | deoxyribodipyrimidine photo-lyase | low | > 109 |
| Shewanella sp. ANA-3 | 0.51 | Shewana3_3826 | | methylcitrate synthase (RefSeq) | 0.39 | Shewana3_1166 | | deoxyribodipyrimidine photo-lyase type I (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.51 | SO0344 | prpC | 2-methylcitrate synthase (EC 2.3.3.5) (from data) | 0.39 | SO3384 | phrB | deoxyribodipyrimidine photolyase (NCBI ptt file) | low | > 76 |
| Pseudomonas fluorescens GW456-L13 | 0.51 | PfGW456L13_4117 | | 2-methylcitrate synthase (EC 2.3.3.5) | 0.39 | PfGW456L13_1589 | | Deoxyribodipyrimidine photolyase (EC 4.1.99.3) | low | > 87 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.50 | Psyr_2086 | | 2-methylcitrate synthase | 0.40 | Psyr_0961 | | deoxyribodipyrimidine photo-lyase type I | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.50 | Psyr_2086 | | 2-methylcitrate synthase | 0.40 | Psyr_0961 | | deoxyribodipyrimidine photo-lyase type I | low | > 86 |
| Pseudomonas fluorescens FW300-N2E3 | 0.50 | AO353_00895 | | 2-methylcitrate synthase | 0.40 | AO353_14820 | | deoxyribodipyrimidine photolyase | low | > 101 |
| Vibrio cholerae E7946 ATCC 55056 | 0.50 | CSW01_06740 | | 2-methylcitrate synthase | 0.44 | CSW01_14320 | | deoxyribodipyrimidine photo-lyase | low | > 62 |
| Shewanella loihica PV-4 | 0.50 | Shew_1821 | | 2-methylcitrate synthase/citrate synthase II (RefSeq) | 0.41 | Shew_1479 | | deoxyribodipyrimidine photo-lyase (RefSeq) | low | > 60 |
| Shewanella amazonensis SB2B | 0.50 | Sama_3295 | | methylcitrate synthase (RefSeq) | 0.42 | Sama_0811 | | deoxyribodipyrimidine photo-lyase (RefSeq) | low | > 62 |
| Phaeobacter inhibens DSM 17395 | 0.29 | PGA1_c28860 | | citrate synthase GltA | 0.20 | PGA1_c13910 | | deoxyribodipyrimidine photo-lyase PhrB | low | > 62 |