Conservation of cofitness between GFF668 and GFF4608 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF668 Histidine ammonia-lyase (EC 4.3.1.3) 1.0 GFF4608 Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1) 0.45 18
Enterobacter asburiae PDN3 0.84 EX28DRAFT_2219 histidine ammonia-lyase (EC 4.3.1.3) 0.69 EX28DRAFT_2282 K+-transporting ATPase, C subunit low > 76
Enterobacter sp. TBS_079 0.84 MPMX20_01400 Histidine ammonia-lyase 0.69 MPMX20_01339 Potassium-transporting ATPase KdpC subunit low > 85
Klebsiella michiganensis M5al 0.82 BWI76_RS08740 Histidine ammonia-lyase (EC 4.3.1.3) (from data) 0.68 BWI76_RS08310 potassium-transporting ATPase subunit C low > 92
Pseudomonas simiae WCS417 0.78 PS417_01750 histidine ammonia-lyase 0.35 PS417_08295 ATPase low > 88
Pseudomonas fluorescens SBW25 0.78 PFLU_RS01805 histidine ammonia-lyase 0.34 PFLU_RS08235 potassium-transporting ATPase subunit KdpC low > 109
Pseudomonas fluorescens SBW25-INTG 0.78 PFLU_RS01805 histidine ammonia-lyase 0.34 PFLU_RS08235 potassium-transporting ATPase subunit KdpC low > 109
Serratia liquefaciens MT49 0.77 IAI46_03660 histidine ammonia-lyase 0.50 IAI46_06170 potassium-transporting ATPase subunit KdpC 0.40 20
Cupriavidus basilensis FW507-4G11 0.77 RR42_RS14640 histidine ammonia-lyase 0.45 RR42_RS00490 potassium-transporting ATPase subunit C low > 128
Pseudomonas sp. RS175 0.77 PFR28_04971 Histidine ammonia-lyase 0.35 PFR28_00941 Potassium-transporting ATPase KdpC subunit low > 88
Pseudomonas sp. S08-1 0.77 OH686_16755 histidine ammonia-lyase 0.34 OH686_01895 K+-transporting ATPase, C subunit low > 80
Pseudomonas putida KT2440 0.77 PP_5032 Histidine ammonia-lyase 0.39 PP_4159 Potassium-transporting ATPase C chain low > 96
Pseudomonas fluorescens FW300-N2C3 0.77 AO356_09600 histidine ammonia-lyase 0.32 AO356_03305 ATPase low > 104
Pseudomonas fluorescens FW300-N2E2 0.77 Pf6N2E2_3799 Histidine ammonia-lyase (EC 4.3.1.3) (from data) 0.34 Pf6N2E2_2492 Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1) — —
Pseudomonas fluorescens FW300-N2E3 0.77 AO353_12270 histidine ammonia-lyase 0.42 AO353_28950 potassium-transporting ATPase subunit C low > 101
Pseudomonas fluorescens GW456-L13 0.76 PfGW456L13_320 Histidine ammonia-lyase (EC 4.3.1.3) (from data) 0.31 PfGW456L13_2203 Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.76 Psyr_4833 histidine ammonia-lyase 0.38 Psyr_2049 K+ transporting ATPase, KdpC subunit low > 86
Pseudomonas syringae pv. syringae B728a 0.76 Psyr_4833 histidine ammonia-lyase 0.38 Psyr_2049 K+ transporting ATPase, KdpC subunit low > 86
Pseudomonas fluorescens FW300-N1B4 0.76 Pf1N1B4_1581 Histidine ammonia-lyase (EC 4.3.1.3) 0.31 Pf1N1B4_313 Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1) low > 87
Paraburkholderia sabiae LMG 24235 0.59 QEN71_RS23515 histidine ammonia-lyase 0.40 QEN71_RS24350 potassium-transporting ATPase subunit KdpC low > 153
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_04873 histidine ammonia-lyase 0.43 H281DRAFT_04531 K+-transporting ATPase ATPase C chain low > 103
Ralstonia solanacearum PSI07 0.57 RPSI07_RS11915 histidine ammonia-lyase 0.47 RPSI07_RS08145 potassium-transporting ATPase subunit KdpC low > 81
Burkholderia phytofirmans PsJN 0.57 BPHYT_RS07555 Histidine ammonia-lyase (EC 4.3.1.3) (from data) 0.42 BPHYT_RS06455 potassium-transporting ATPase C chain low > 109
Ralstonia solanacearum GMI1000 0.57 RS_RS13250 histidine ammonia-lyase 0.46 RS_RS16955 potassium-transporting ATPase subunit C low > 80
Paraburkholderia graminis OAS925 0.57 ABIE53_001729 histidine ammonia-lyase 0.42 ABIE53_001555 K+-transporting ATPase ATPase C chain low > 113
Ralstonia solanacearum IBSBF1503 0.57 RALBFv3_RS05390 histidine ammonia-lyase 0.46 RALBFv3_RS09125 potassium-transporting ATPase subunit KdpC low > 76
Ralstonia solanacearum UW163 0.57 UW163_RS08235 histidine ammonia-lyase 0.46 UW163_RS04470 potassium-transporting ATPase subunit KdpC — —
Ralstonia sp. UNC404CL21Col 0.56 ABZR87_RS01025 histidine ammonia-lyase 0.45 ABZR87_RS04520 potassium-transporting ATPase subunit KdpC low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.56 GFF3589 Histidine ammonia-lyase (EC 4.3.1.3) 0.27 GFF4473 Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1) — —
Variovorax sp. OAS795 0.55 ABID97_RS03420 histidine ammonia-lyase 0.43 ABID97_RS01015 potassium-transporting ATPase subunit KdpC low > 91
Rahnella sp. WP5 0.55 EX31_RS06755 histidine ammonia-lyase 0.51 EX31_RS23340 potassium-transporting ATPase subunit KdpC low > 89
Dickeya dadantii 3937 0.54 DDA3937_RS14995 histidine ammonia-lyase 0.47 DDA3937_RS06375 potassium-transporting ATPase subunit KdpC low > 74
Variovorax sp. SCN45 0.54 GFF6409 Histidine ammonia-lyase (EC 4.3.1.3) 0.43 GFF3517 Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1) low > 127
Azospirillum sp. SherDot2 0.54 MPMX19_04940 Histidine ammonia-lyase 0.44 MPMX19_03747 Potassium-transporting ATPase KdpC subunit low > 112
Dickeya dianthicola 67-19 0.54 HGI48_RS15090 histidine ammonia-lyase 0.47 HGI48_RS06420 potassium-transporting ATPase subunit KdpC low > 71
Rhodospirillum rubrum S1H 0.54 Rru_A1301 Histidine ammonia-lyase (NCBI) 0.35 Rru_A1157 Potassium-transporting ATPase (NCBI) low > 58
Pantoea sp. MT58 0.54 IAI47_13275 histidine ammonia-lyase 0.61 IAI47_01245 potassium-transporting ATPase subunit KdpC low > 76
Acidovorax sp. GW101-3H11 0.53 Ac3H11_2558 Histidine ammonia-lyase (EC 4.3.1.3) (from data) 0.43 Ac3H11_2409 Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1) low > 79
Dickeya dianthicola ME23 0.53 DZA65_RS15835 histidine ammonia-lyase 0.49 DZA65_RS06765 potassium-transporting ATPase subunit KdpC low > 75
Brevundimonas sp. GW460-12-10-14-LB2 0.50 A4249_RS06630 histidine ammonia-lyase 0.31 A4249_RS15635 K(+)-transporting ATPase subunit C low > 48
Sphingomonas koreensis DSMZ 15582 0.49 Ga0059261_3963 Histidine ammonia-lyase (EC 4.3.1.3) (from data) 0.37 Ga0059261_3885 K+-transporting ATPase, C subunit low > 68
Sinorhizobium meliloti 1021 0.49 SM_b21165 Histidine ammonia-lyase (EC 4.3.1.3) (from data) 0.38 SMa2329 potassium-transporting ATPase subunit C low > 103
Xanthomonas campestris pv. campestris strain 8004 0.48 Xcc-8004.3296.1 Histidine ammonia-lyase (EC 4.3.1.3) 0.31 Xcc-8004.4380.1 Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1) — —
Rhizobium sp. OAE497 0.48 ABIE40_RS20355 histidine ammonia-lyase 0.41 ABIE40_RS24615 potassium-transporting ATPase subunit KdpC low > 107
Bosea sp. OAE506 0.48 ABIE41_RS23645 histidine ammonia-lyase 0.39 ABIE41_RS24225 potassium-transporting ATPase subunit KdpC low > 77
Agrobacterium fabrum C58 0.48 Atu3933 histidine ammonia-lyase 0.41 Atu3788 potassium-transporting ATPase subunit C low > 89
Caulobacter crescentus NA1000 Δfur 0.48 CCNA_01010 histidine ammonia-lyase 0.39 CCNA_01665 potassium-transporting ATPase C chain low > 67
Caulobacter crescentus NA1000 0.48 CCNA_01010 histidine ammonia-lyase 0.39 CCNA_01665 potassium-transporting ATPase C chain low > 66
Pontibacter actiniarum KMM 6156, DSM 19842 0.38 CA264_04560 histidine ammonia-lyase 0.29 CA264_09485 potassium-transporting ATPase subunit C low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.37 CA265_RS22270 Histidine ammonia-lyase (EC 4.3.1.3) (from data) 0.31 CA265_RS00225 potassium-transporting ATPase subunit C low > 88
Phocaeicola vulgatus CL09T03C04 0.34 HMPREF1058_RS02545 histidine ammonia-lyase 0.28 HMPREF1058_RS04180 K(+)-transporting ATPase subunit C low > 67
Phocaeicola dorei CL03T12C01 0.34 ABI39_RS01830 histidine ammonia-lyase 0.27 ABI39_RS17040 K(+)-transporting ATPase subunit C low > 72
Bacteroides thetaiotaomicron VPI-5482 0.34 BT2690 histidine ammonia-lyase (NCBI ptt file) 0.29 BT2423 K+-transporting ATPase C chain (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.34 BACOVA_00991 histidine ammonia-lyase 0.28 BACOVA_02980 putative K+-transporting ATPase, C subunit low > 94
Bacteroides stercoris CC31F 0.33 HMPREF1181_RS00340 histidine ammonia-lyase 0.26 HMPREF1181_RS03670 K(+)-transporting ATPase subunit C low > 56
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS06750 histidine ammonia-lyase 0.41 ABZR86_RS13205 potassium-transporting ATPase subunit KdpC low > 74
Herbaspirillum seropedicae SmR1 0.29 HSERO_RS22680 histidine ammonia-lyase 0.39 HSERO_RS18860 potassium-transporting ATPase subunit C low > 78
Lysobacter sp. OAE881 0.28 ABIE51_RS13345 aromatic amino acid lyase 0.36 ABIE51_RS10010 potassium-transporting ATPase subunit KdpC low > 62
Mucilaginibacter yixingensis YX-36 DSM 26809 0.25 ABZR88_RS19260 histidine ammonia-lyase 0.30 ABZR88_RS19780 K(+)-transporting ATPase subunit C low > 71
Escherichia coli ECOR38 0.20 HEPCGN_01360 histidine ammonia-lyase 0.75 HEPCGN_01165 kdpC K(+)-transporting ATPase subunit C low > 85

Not shown: 16 genomes with orthologs for GFF668 only; 23 genomes with orthologs for GFF4608 only