Conservation of cofitness between PS417_23385 and PS417_23380 in Pseudomonas simiae WCS417

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_23385 cytochrome o ubiquinol oxidase subunit I 1.0 PS417_23380 cytochrome o ubiquinol oxidase subunit III 0.86 3
Pseudomonas fluorescens SBW25 0.99 PFLU_RS25215 cytochrome o ubiquinol oxidase subunit I 1.00 PFLU_RS25210 cytochrome o ubiquinol oxidase subunit III 0.95 3
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS25215 cytochrome o ubiquinol oxidase subunit I 1.00 PFLU_RS25210 cytochrome o ubiquinol oxidase subunit III 0.94 3
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_972 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) 0.88 Pf1N1B4_971 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.99 1
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_16965 cytochrome o ubiquinol oxidase subunit I 0.81 AO356_16970 cytochrome o ubiquinol oxidase subunit III 0.93 2
Pseudomonas sp. RS175 0.92 PFR28_00243 Cytochrome bo(3) ubiquinol oxidase subunit 1 0.80 PFR28_00244 Cytochrome bo(3) ubiquinol oxidase subunit 3 0.37 11
Pseudomonas fluorescens FW300-N2E2 0.92 Pf6N2E2_5318 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) 0.80 Pf6N2E2_5319 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.96 2
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_15455 cytochrome o ubiquinol oxidase subunit I 0.80 AO353_15460 cytochrome o ubiquinol oxidase subunit III 0.96 1
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_4935 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) 0.82 PfGW456L13_4934 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.96 3
Pseudomonas syringae pv. syringae B728a 0.83 Psyr_1142 cytochrome bo3 quinol oxidase subunit 1 apoprotein 0.71 Psyr_1143 cytochrome bo3 quinol oxidase subunit 3 — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.83 Psyr_1142 cytochrome bo3 quinol oxidase subunit 1 apoprotein 0.71 Psyr_1143 cytochrome bo3 quinol oxidase subunit 3 — —
Pseudomonas putida KT2440 0.82 PP_0813 cytochrome bo terminal oxidase subunit I 0.69 PP_0814 cytochrome bo terminal oxidase subunit III — —
Shewanella loihica PV-4 0.72 Shew_0367 cytochrome-c oxidase (RefSeq) 0.60 Shew_0368 cytochrome c oxidase, subunit III (RefSeq) low > 60
Shewanella sp. ANA-3 0.72 Shewana3_4032 cytochrome c oxidase, subunit I (RefSeq) 0.61 Shewana3_4033 cytochrome c oxidase, subunit III (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.71 MIT1002_03928 Ubiquinol oxidase subunit 1 0.59 MIT1002_03927 Cytochrome o ubiquinol oxidase subunit 3 0.34 43
Pectobacterium carotovorum WPP14 0.70 HER17_RS15880 cytochrome o ubiquinol oxidase subunit I 0.67 HER17_RS15885 cytochrome o ubiquinol oxidase subunit III 0.81 17
Dickeya dianthicola ME23 0.70 DZA65_RS05980 cytochrome o ubiquinol oxidase subunit I 0.67 DZA65_RS05975 cytochrome o ubiquinol oxidase subunit III 0.52 5
Dickeya dadantii 3937 0.70 DDA3937_RS05610 cytochrome o ubiquinol oxidase subunit I 0.67 DDA3937_RS05605 cytochrome o ubiquinol oxidase subunit III — —
Serratia liquefaciens MT49 0.70 IAI46_04980 cytochrome o ubiquinol oxidase subunit I 0.67 IAI46_04975 cytochrome o ubiquinol oxidase subunit III 0.84 4
Escherichia coli ECRC62 0.70 BNILDI_22715 cyoB cytochrome o ubiquinol oxidase subunit I 0.70 BNILDI_22720 cyoC cytochrome o ubiquinol oxidase subunit III — —
Escherichia coli ECRC98 0.70 JDDGAC_12020 cyoB cytochrome o ubiquinol oxidase subunit I 0.70 JDDGAC_12025 cyoC cytochrome o ubiquinol oxidase subunit III — —
Escherichia coli Nissle 1917 0.70 ECOLIN_RS02590 cytochrome o ubiquinol oxidase subunit I 0.70 ECOLIN_RS02585 cytochrome o ubiquinol oxidase subunit III 0.87 28
Escherichia coli ECRC101 0.70 OKFHMN_08365 cyoB cytochrome o ubiquinol oxidase subunit I 0.70 OKFHMN_08370 cyoC cytochrome o ubiquinol oxidase subunit III — —
Escherichia coli ECOR38 0.70 HEPCGN_06980 cyoB cytochrome o ubiquinol oxidase subunit I 0.70 HEPCGN_06985 cyoC cytochrome o ubiquinol oxidase subunit III 0.87 27
Escherichia coli BW25113 0.70 b0431 cyoB cytochrome o ubiquinol oxidase subunit I (NCBI) 0.70 b0430 cyoC cytochrome o ubiquinol oxidase subunit III (NCBI) 0.93 3
Escherichia coli BL21 0.70 ECD_00382 cytochrome o ubiquinol oxidase subunit I 0.70 ECD_00381 cytochrome o ubiquinol oxidase subunit III 0.94 2
Escherichia coli ECRC101 0.70 MCAODC_27590 cyoB cytochrome o ubiquinol oxidase subunit I 0.70 MCAODC_27595 cyoC cytochrome o ubiquinol oxidase subunit III — —
Escherichia fergusonii Becca 0.70 EFB2_03626 Cytochrome bo(3) ubiquinol oxidase subunit 1 0.70 EFB2_03627 Cytochrome bo(3) ubiquinol oxidase subunit 3 low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_03242 Cytochrome bo(3) ubiquinol oxidase subunit 1 0.70 OHPLBJKB_03243 Cytochrome bo(3) ubiquinol oxidase subunit 3 0.87 2
Escherichia coli ECRC99 0.70 KEDOAH_19600 cyoB cytochrome o ubiquinol oxidase subunit I 0.70 KEDOAH_19595 cyoC cytochrome o ubiquinol oxidase subunit III — —
Dickeya dianthicola 67-19 0.70 HGI48_RS05655 cytochrome o ubiquinol oxidase subunit I 0.66 HGI48_RS05650 cytochrome o ubiquinol oxidase subunit III 0.68 21
Escherichia coli ECRC102 0.70 NIAGMN_06420 cyoB cytochrome o ubiquinol oxidase subunit I 0.70 NIAGMN_06425 cyoC cytochrome o ubiquinol oxidase subunit III — —
Escherichia coli ECOR27 0.70 NOLOHH_01300 cyoB cytochrome o ubiquinol oxidase subunit I 0.70 NOLOHH_01305 cyoC cytochrome o ubiquinol oxidase subunit III low > 57
Klebsiella michiganensis M5al 0.70 BWI76_RS06490 cytochrome ubiquinol oxidase subunit I 0.73 BWI76_RS06485 cytochrome o ubiquinol oxidase subunit III 0.71 2
Ralstonia solanacearum PSI07 0.69 RPSI07_RS10570 cytochrome o ubiquinol oxidase subunit I 0.59 RPSI07_RS10575 cytochrome o ubiquinol oxidase subunit III — —
Enterobacter asburiae PDN3 0.69 EX28DRAFT_2540 cytochrome o ubiquinol oxidase, subunit I 0.70 EX28DRAFT_2541 cytochrome o ubiquinol oxidase, subunit III 0.77 13
Enterobacter sp. TBS_079 0.69 MPMX20_01022 Cytochrome bo(3) ubiquinol oxidase subunit 1 0.64 MPMX20_01021 Cytochrome bo(3) ubiquinol oxidase subunit 3 0.78 3
Rahnella sp. WP5 0.69 EX31_RS22215 cytochrome o ubiquinol oxidase subunit I 0.70 EX31_RS22210 cytochrome o ubiquinol oxidase subunit III 0.98 1
Cupriavidus basilensis FW507-4G11 0.69 RR42_RS32595 cytochrome o ubiquinol oxidase subunit I 0.59 RR42_RS32590 cytochrome o ubiquinol oxidase subunit III 0.62 4
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.69 GFF4345 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) 0.70 GFF4344 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.88 3
Ralstonia sp. UNC404CL21Col 0.68 ABZR87_RS02330 cytochrome o ubiquinol oxidase subunit I 0.56 ABZR87_RS02325 cytochrome o ubiquinol oxidase subunit III 0.77 2
Ralstonia solanacearum GMI1000 0.68 RS_RS14605 cytochrome o ubiquinol oxidase subunit I 0.59 RS_RS14600 cytochrome o ubiquinol oxidase subunit III 0.61 1
Pantoea sp. MT58 0.68 IAI47_14685 cytochrome o ubiquinol oxidase subunit I 0.70 IAI47_14690 cytochrome o ubiquinol oxidase subunit III 0.94 2
Ralstonia solanacearum IBSBF1503 0.68 RALBFv3_RS06655 cytochrome o ubiquinol oxidase subunit I 0.59 RALBFv3_RS06650 cytochrome o ubiquinol oxidase subunit III — —
Ralstonia solanacearum UW163 0.68 UW163_RS06970 cytochrome o ubiquinol oxidase subunit I 0.59 UW163_RS06975 cytochrome o ubiquinol oxidase subunit III — —
Erwinia tracheiphila SCR3 0.67 LU632_RS18380 cyoB cytochrome o ubiquinol oxidase subunit I 0.71 LU632_RS18385 cytochrome o ubiquinol oxidase subunit III — —
Paraburkholderia sabiae LMG 24235 0.67 QEN71_RS15345 cytochrome o ubiquinol oxidase subunit I 0.57 QEN71_RS15350 cytochrome o ubiquinol oxidase subunit III low > 153
Burkholderia phytofirmans PsJN 0.66 BPHYT_RS24920 cytochrome O ubiquinol oxidase 0.55 BPHYT_RS24925 cytochrome O ubiquinol oxidase low > 109
Xanthomonas campestris pv. campestris strain 8004 0.66 Xcc-8004.3816.1 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) 0.51 Xcc-8004.3815.1 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.43 31
Acinetobacter radioresistens SK82 0.65 MPMX26_01161 Cytochrome bo(3) ubiquinol oxidase subunit 1 0.53 MPMX26_01160 Cytochrome bo(3) ubiquinol oxidase subunit 3 0.90 3
Caulobacter crescentus NA1000 0.64 CCNA_01850 quinol cytochrome oxidase polypeptide I 0.50 CCNA_01849 quinol cytochrome oxidase polypeptide III 0.99 1
Caulobacter crescentus NA1000 Δfur 0.64 CCNA_01850 quinol cytochrome oxidase polypeptide I 0.50 CCNA_01849 quinol cytochrome oxidase polypeptide III low > 67
Azospirillum sp. SherDot2 0.63 MPMX19_06176 Cytochrome bo(3) ubiquinol oxidase subunit 1 0.53 MPMX19_06177 Cytochrome bo(3) ubiquinol oxidase subunit 3 — —
Rhizobium sp. OAE497 0.63 ABIE40_RS19820 cytochrome o ubiquinol oxidase subunit I 0.56 ABIE40_RS19825 cytochrome o ubiquinol oxidase subunit III low > 107
Variovorax sp. OAS795 0.62 ABID97_RS07635 cytochrome o ubiquinol oxidase subunit I 0.57 ABID97_RS07630 cytochrome o ubiquinol oxidase subunit III 0.75 3
Paraburkholderia graminis OAS925 0.62 ABIE53_005341 cytochrome o ubiquinol oxidase subunit 1 0.58 ABIE53_005342 cytochrome o ubiquinol oxidase subunit 3 low > 113
Agrobacterium fabrum C58 0.62 Atu0141 cytochrome O ubiquinol oxidase subunit I 0.55 Atu0140 cytochrome o ubiquinol oxidase subunit III — —
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS12315 cytochrome O ubiquinol oxidase 0.55 HSERO_RS12310 cytochrome O ubiquinol oxidase — —
Sinorhizobium meliloti 1021 0.62 SM_b21488 cytochrome o ubiquinol oxidase subunit I 0.57 SM_b21489 cytochrome O ubiquinol oxidase subunit III 0.61 2
Variovorax sp. SCN45 0.62 GFF5677 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) 0.57 GFF5676 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.91 20
Paraburkholderia bryophila 376MFSha3.1 0.61 H281DRAFT_03427 cytochrome bo3 quinol oxidase subunit 1 apoprotein 0.56 H281DRAFT_03428 cytochrome bo3 quinol oxidase subunit 3 (EC 1.10.3.-) 0.40 94
Azospirillum brasilense Sp245 0.61 AZOBR_RS23175 cytochrome O ubiquinol oxidase 0.55 AZOBR_RS23170 cytochrome O ubiquinol oxidase 0.95 1
Lysobacter sp. OAE881 0.61 ABIE51_RS09770 cytochrome o ubiquinol oxidase subunit I 0.51 ABIE51_RS09775 cytochrome o ubiquinol oxidase subunit III 0.93 2
Dyella japonica UNC79MFTsu3.2 0.60 ABZR86_RS07620 cytochrome o ubiquinol oxidase subunit I 0.54 ABZR86_RS07615 cytochrome o ubiquinol oxidase subunit III 0.85 3
Brevundimonas sp. GW460-12-10-14-LB2 0.60 A4249_RS04450 cytochrome o ubiquinol oxidase subunit I 0.53 A4249_RS04455 cytochrome o ubiquinol oxidase subunit III — —
Bosea sp. OAE506 0.59 ABIE41_RS21025 cytochrome o ubiquinol oxidase subunit I 0.54 ABIE41_RS21030 cytochrome o ubiquinol oxidase subunit III low > 77
Sphingomonas koreensis DSMZ 15582 0.58 Ga0059261_1565 cytochrome bo3 quinol oxidase subunit 1 apoprotein (EC 1.10.3.-) 0.56 Ga0059261_1564 cytochrome bo3 quinol oxidase subunit 3 (EC 1.10.3.-) 0.90 2
Acidovorax sp. GW101-3H11 0.56 Ac3H11_3142 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) 0.53 Ac3H11_3143 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) — —

Not shown: 0 genomes with orthologs for PS417_23385 only; 1 genomes with orthologs for PS417_23380 only