Conservation of cofitness between GFF2999 and GFF4529 in Hydrogenophaga sp. GW460-11-11-14-LB1

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF2999 Acyl carrier protein (ACP1) 1.0 GFF4529 LSU m3Psi1915 methyltransferase RlmH 0.53 18
Lysobacter sp. OAE881 0.55 ABIE51_RS01890 phosphopantetheine-binding protein 0.36 ABIE51_RS06755 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 62
Rhodanobacter denitrificans MT42 0.53 LRK55_RS09385 phosphopantetheine-binding protein 0.40 LRK55_RS02450 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH — —
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS09725 phosphopantetheine-binding protein 0.40 LRK54_RS02695 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 59
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS13575 phosphopantetheine-binding protein 0.41 ABZR86_RS09055 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 74
Rhodanobacter sp. FW510-T8 0.51 OKGIIK_16000 acyl carrier protein 0.41 OKGIIK_09750 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH — —
Ralstonia solanacearum PSI07 0.50 RPSI07_RS21890 acyl carrier protein 0.65 RPSI07_RS13660 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 81
Ralstonia solanacearum GMI1000 0.49 RS_RS02150 acyl carrier protein 0.65 RS_RS11015 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH — —
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS07260 phosphopantetheine-binding protein 0.64 ABZR87_RS15430 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 80
Herbaspirillum seropedicae SmR1 0.42 HSERO_RS18475 acyl carrier protein 0.64 HSERO_RS17780 50S rRNA methyltransferase — —
Pseudomonas stutzeri RCH2 0.40 Psest_3689 Acyl carrier protein 0.42 Psest_0511 rRNA large subunit m3Psi methyltransferase RlmH — —
Cupriavidus basilensis FW507-4G11 0.40 RR42_RS31255 acyl carrier protein 0.61 RR42_RS04710 50S rRNA methyltransferase — —
Escherichia coli ECRC101 0.40 MCAODC_07150 acpP acyl carrier protein 0.48 MCAODC_26575 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH — —
Escherichia coli ECRC99 0.40 KEDOAH_11515 acpP acyl carrier protein 0.48 KEDOAH_20610 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH — —
Escherichia coli ECRC101 0.40 OKFHMN_16625 acpP acyl carrier protein 0.48 OKFHMN_07360 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH — —
Escherichia coli ECRC102 0.40 NIAGMN_14395 acpP acyl carrier protein 0.48 NIAGMN_05415 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH — —
Escherichia coli ECRC98 0.40 JDDGAC_20255 acpP acyl carrier protein 0.48 JDDGAC_11005 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH — —
Serratia liquefaciens MT49 0.39 IAI46_04040 acyl carrier protein 0.52 IAI46_05935 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 86
Dickeya dianthicola 67-19 0.38 HGI48_RS21470 acyl carrier protein 0.50 HGI48_RS06220 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH — —
Azospirillum brasilense Sp245 0.38 AZOBR_RS04745 acyl carrier protein 0.34 AZOBR_RS04060 50S rRNA methyltransferase low > 97
Escherichia coli Nissle 1917 0.38 ECOLIN_RS05505 phosphopantetheine-binding protein 0.48 ECOLIN_RS03465 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH — —
Rahnella sp. WP5 0.38 EX31_RS21300 acyl carrier protein 0.53 EX31_RS23125 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.35 24
Escherichia fergusonii Becca 0.38 EFB2_03026 hypothetical protein 0.48 EFB2_03456 Ribosomal RNA large subunit methyltransferase H low > 86
Pseudomonas sp. S08-1 0.37 OH686_09890 Acyl carrier protein 0.42 OH686_09325 rRNA large subunit m3Psi methyltransferase RlmH — —
Burkholderia phytofirmans PsJN 0.37 BPHYT_RS15190 acyl carrier protein 0.59 BPHYT_RS06385 ribosomal RNA large subunit methyltransferase H low > 109
Dickeya dianthicola ME23 0.37 DZA65_RS22450 acyl carrier protein 0.51 DZA65_RS06565 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 75
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS03810 phosphopantetheine-binding protein 0.62 QEN71_RS24420 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 153
Paraburkholderia graminis OAS925 0.36 ABIE53_003211 acyl carrier protein 0.61 ABIE53_001541 23S rRNA (pseudouridine1915-N3)-methyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.36 Psyr_0437 acyl carrier protein, putative 0.43 Psyr_4366 Protein of unknown function DUF163 low > 86
Pseudomonas syringae pv. syringae B728a 0.36 Psyr_0437 acyl carrier protein, putative 0.43 Psyr_4366 Protein of unknown function DUF163 — —
Kangiella aquimarina DSM 16071 0.36 B158DRAFT_0434 Acyl carrier protein 0.45 B158DRAFT_0085 rRNA large subunit m3Psi methyltransferase RlmH low > 40
Enterobacter asburiae PDN3 0.36 EX28DRAFT_4103 Acyl carrier protein 0.48 EX28DRAFT_2327 rRNA large subunit m3Psi methyltransferase RlmH — —
Paraburkholderia bryophila 376MFSha3.1 0.36 H281DRAFT_03983 acyl carrier protein 0.60 H281DRAFT_04517 23S rRNA (pseudouridine1915-N3)-methyltransferase — —
Pantoea sp. MT58 0.36 IAI47_12375 acyl carrier protein 0.52 IAI47_14020 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 76
Shewanella sp. ANA-3 0.36 Shewana3_0344 acyl carrier protein, putative (RefSeq) 0.52 Shewana3_0996 rRNA large subunit methyltransferase (RefSeq) low > 73
Shewanella loihica PV-4 0.35 Shew_3511 acyl carrier protein, putative (RefSeq) 0.53 Shew_2934 SPOUT methyltransferase superfamily protein (RefSeq) — —
Enterobacter sp. TBS_079 0.35 MPMX20_04359 hypothetical protein 0.47 MPMX20_01295 Ribosomal RNA large subunit methyltransferase H low > 85
Bacteroides ovatus ATCC 8483 0.34 BACOVA_01185 putative acyl carrier protein 0.27 BACOVA_04305 putative rRNA large subunit m3Psi methyltransferase RlmH low > 94
Shewanella amazonensis SB2B 0.33 Sama_3379 acyl carrier protein, putative (RefSeq) 0.51 Sama_2587 rRNA large subunit methyltransferase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.33 SO4368 acyl carrier protein, putative (NCBI ptt file) 0.52 SO1169 conserved hypothetical protein TIGR00246 (NCBI ptt file) low > 76
Pseudomonas fluorescens FW300-N1B4 0.33 Pf1N1B4_1503 Acyl carrier protein (ACP1) 0.41 Pf1N1B4_2691 LSU m3Psi1915 methyltransferase RlmH — —
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_236 Acyl carrier protein (ACP1) 0.41 PfGW456L13_1359 LSU m3Psi1915 methyltransferase RlmH low > 87
Pseudomonas simiae WCS417 0.33 PS417_02110 acyl carrier protein 0.42 PS417_24730 50S rRNA methyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS02155 acyl carrier protein 0.42 PFLU_RS26660 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 109
Pseudomonas fluorescens SBW25 0.32 PFLU_RS02155 acyl carrier protein 0.42 PFLU_RS26660 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 109
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_09145 acyl carrier protein 0.41 AO356_15305 50S rRNA methyltransferase low > 104
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_12690 acyl carrier protein 0.41 AO353_06480 50S rRNA methyltransferase low > 101
Phocaeicola vulgatus CL09T03C04 0.31 HMPREF1058_RS10615 acyl carrier protein 0.28 HMPREF1058_RS15935 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 67
Pseudomonas sp. RS175 0.31 PFR28_05037 hypothetical protein 0.42 PFR28_03869 Ribosomal RNA large subunit methyltransferase H — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.31 ABZR88_RS19310 phosphopantetheine-binding protein 0.26 ABZR88_RS17055 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH — —
Castellaniella sp019104865 MT123 0.31 ABCV34_RS14900 phosphopantetheine-binding protein 0.54 ABCV34_RS02530 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH low > 48
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_3712 Acyl carrier protein (ACP1) 0.41 Pf6N2E2_4996 LSU m3Psi1915 methyltransferase RlmH low > 103

Not shown: 0 genomes with orthologs for GFF2999 only; 44 genomes with orthologs for GFF4529 only