Conservation of cofitness between GFF517 and GFF4179 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF517 Oligopeptidase A (EC 3.4.24.70) 1.0 GFF4179 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.55 8
Escherichia coli ECOR38 0.94 HEPCGN_15325 prlC oligopeptidase A 0.91 HEPCGN_20345 pheA bifunctional chorismate mutase/prephenate dehydratase low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.94 OHPLBJKB_00205 Oligopeptidase A 0.91 OHPLBJKB_01109 P-protein low > 73
Escherichia coli BW25113 0.94 b3498 prlC oligopeptidase A (NCBI) 0.91 b2599 pheA fused chorismate mutase P/prephenate dehydratase (NCBI) low > 76
Escherichia fergusonii Becca 0.94 EFB2_00317 Oligopeptidase A 0.91 EFB2_01293 Bifunctional chorismate mutase/prephenate dehydratase low > 86
Escherichia coli ECRC99 0.94 KEDOAH_11730 prlC oligopeptidase A 0.91 KEDOAH_06995 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia coli ECRC101 0.94 OKFHMN_16415 prlC oligopeptidase A 0.91 OKFHMN_21225 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia coli ECRC98 0.94 JDDGAC_20045 prlC oligopeptidase A 0.91 JDDGAC_24890 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia coli ECRC102 0.94 NIAGMN_14180 prlC oligopeptidase A 0.91 NIAGMN_18995 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia coli ECRC101 0.94 MCAODC_06930 prlC oligopeptidase A 0.91 MCAODC_11755 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia coli Nissle 1917 0.94 ECOLIN_RS19985 oligopeptidase A 0.91 ECOLIN_RS14695 bifunctional chorismate mutase/prephenate dehydratase low > 52
Escherichia coli BL21 0.93 ECD_03347 oligopeptidase A 0.91 ECD_02488 chorismate mutase and prephenate dehydratase, P-protein low > 60
Escherichia coli ECOR27 0.93 NOLOHH_08350 prlC oligopeptidase A 0.91 NOLOHH_12900 pheA bifunctional chorismate mutase/prephenate dehydratase low > 57
Enterobacter asburiae PDN3 0.93 EX28DRAFT_4063 Zn-dependent oligopeptidases 0.90 EX28DRAFT_2699 chorismate mutase (EC 5.4.99.5) low > 76
Escherichia coli ECRC62 0.93 BNILDI_03210 prlC oligopeptidase A 0.91 BNILDI_11705 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Enterobacter sp. TBS_079 0.93 MPMX20_04397 Oligopeptidase A 0.90 MPMX20_03466 Bifunctional chorismate mutase/prephenate dehydratase low > 85
Klebsiella michiganensis M5al 0.92 BWI76_RS26610 oligopeptidase A 0.87 BWI76_RS21465 bifunctional chorismate mutase/prephenate dehydratase low > 92
Pantoea sp. MT58 0.87 IAI47_01345 oligopeptidase A 0.78 IAI47_04410 bifunctional chorismate mutase/prephenate dehydratase low > 76
Erwinia tracheiphila SCR3 0.86 LU632_RS19470 prlC oligopeptidase A 0.74 LU632_RS16960 pheA bifunctional chorismate mutase/prephenate dehydratase low > 74
Pectobacterium carotovorum WPP14 0.85 HER17_RS21300 oligopeptidase A 0.77 HER17_RS05385 bifunctional chorismate mutase/prephenate dehydratase low > 75
Dickeya dianthicola ME23 0.83 DZA65_RS00035 oligopeptidase A 0.74 DZA65_RS17345 bifunctional chorismate mutase/prephenate dehydratase low > 75
Dickeya dadantii 3937 0.83 DDA3937_RS21265 oligopeptidase A 0.75 DDA3937_RS16130 bifunctional chorismate mutase/prephenate dehydratase low > 74
Serratia liquefaciens MT49 0.83 IAI46_24210 oligopeptidase A 0.74 IAI46_03965 bifunctional chorismate mutase/prephenate dehydratase low > 86
Dickeya dianthicola 67-19 0.82 HGI48_RS00045 oligopeptidase A 0.75 HGI48_RS16250 bifunctional chorismate mutase/prephenate dehydratase low > 71
Rahnella sp. WP5 0.82 EX31_RS05165 oligopeptidase A 0.72 EX31_RS07585 bifunctional chorismate mutase/prephenate dehydratase low > 89
Vibrio cholerae E7946 ATCC 55056 0.72 CSW01_01010 oligopeptidase A 0.52 CSW01_03680 bifunctional chorismate mutase/prephenate dehydratase low > 62
Alteromonas macleodii MIT1002 0.64 MIT1002_03633 Oligopeptidase A 0.51 MIT1002_01316 P-protein low > 70
Kangiella aquimarina DSM 16071 0.59 B158DRAFT_0457 Zn-dependent oligopeptidases 0.35 B158DRAFT_1385 Prephenate dehydratase low > 40
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A 0.21 Psyr_3645 prephenate dehydratase — —
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A 0.21 Psyr_3645 prephenate dehydratase — —
Pseudomonas sp. RS175 0.57 PFR28_04699 Oligopeptidase A 0.21 PFR28_00907 Bifunctional chorismate mutase/prephenate dehydratase — —
Marinobacter adhaerens HP15 0.57 HP15_3759 oligopeptidase A-like protein 0.22 HP15_1362 chorismate mutase / prephenate dehydratase — —
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_4091 Oligopeptidase A (EC 3.4.24.70) 0.21 Pf6N2E2_2520 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) — —
Pseudomonas putida KT2440 0.57 PP_0096 oligopeptidase A 0.20 PP_1769 chorismate mutase/Prephenate dehydratase — —
Pseudomonas simiae WCS417 0.57 PS417_00245 oligopeptidase A 0.21 PS417_08125 prephenate dehydratase low > 88
Pseudomonas fluorescens FW300-N2C3 0.57 AO356_11120 oligopeptidase A 0.21 AO356_03465 prephenate dehydratase — —
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS00240 oligopeptidase A 0.21 PFLU_RS08095 prephenate dehydratase — —
Pseudomonas stutzeri RCH2 0.57 Psest_4320 Zn-dependent oligopeptidases 0.21 Psest_1984 chorismate mutase domain of proteobacterial P-protein, clade 2 — —
Pseudomonas fluorescens SBW25 0.57 PFLU_RS00240 oligopeptidase A 0.21 PFLU_RS08095 prephenate dehydratase — —
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_1844 Oligopeptidase A (EC 3.4.24.70) 0.21 Pf1N1B4_350 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) low > 87
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_624 Oligopeptidase A (EC 3.4.24.70) 0.21 PfGW456L13_2176 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) low > 87
Pseudomonas sp. S08-1 0.56 OH686_12360 Oligopeptidase A 0.21 OH686_20870 Chorismate mutase I / Prephenate dehydratase low > 80
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_10775 oligopeptidase A 0.21 AO353_02070 prephenate dehydratase low > 101
Rhodanobacter sp. FW510-T8 0.50 OKGIIK_15380 dcp oligopeptidase A 0.19 OKGIIK_06915 pheA prephenate dehydratase low > 52
Dyella japonica UNC79MFTsu3.2 0.49 ABZR86_RS14940 M3 family metallopeptidase 0.20 ABZR86_RS02225 prephenate dehydratase low > 74
Dechlorosoma suillum PS 0.49 Dsui_0046 Zn-dependent oligopeptidase 0.18 Dsui_1940 chorismate mutase, clade 2 — —
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS05695 M3 family metallopeptidase 0.22 QEN71_RS04070 prephenate dehydratase low > 153
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS07290 oligopeptidase A 0.20 HSERO_RS18430 chorismate mutase low > 78
Paraburkholderia graminis OAS925 0.48 ABIE53_002798 oligopeptidase A 0.22 ABIE53_003157 chorismate mutase/prephenate dehydratase low > 113
Burkholderia phytofirmans PsJN 0.48 BPHYT_RS12875 oligopeptidase A 0.22 BPHYT_RS14910 chorismate mutase low > 109
Rhodanobacter denitrificans MT42 0.48 LRK55_RS08380 M3 family metallopeptidase 0.20 LRK55_RS00135 prephenate dehydratase low > 63
Rhodanobacter denitrificans FW104-10B01 0.48 LRK54_RS08615 M3 family metallopeptidase 0.20 LRK54_RS00395 prephenate dehydratase low > 59
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_00461 oligopeptidase A Metallo peptidase. MEROPS family M03A 0.22 H281DRAFT_03925 chorismate mutase 0.47 38
Ralstonia solanacearum GMI1000 0.47 RS_RS08035 oligopeptidase A 0.19 RS_RS04495 prephenate dehydratase low > 80
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS07340 oligopeptidase A 0.21 RR42_RS04460 chorismate mutase low > 128
Ralstonia solanacearum UW163 0.47 UW163_RS15000 oligopeptidase A 0.19 UW163_RS16050 chorismate mutase — —
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS01690 oligopeptidase A 0.19 RALBFv3_RS13760 chorismate mutase low > 76
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS13490 M3 family metallopeptidase 0.20 ABZR87_RS09450 prephenate dehydratase low > 80
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.4539.1 Oligopeptidase A (EC 3.4.24.70) 0.20 Xcc-8004.3282.1 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) low > 74
Ralstonia solanacearum PSI07 0.46 RPSI07_RS15795 oligopeptidase A 0.19 RPSI07_RS19710 prephenate dehydratase low > 81
Acinetobacter radioresistens SK82 0.46 MPMX26_02685 Oligopeptidase A 0.22 MPMX26_02021 Bifunctional chorismate mutase/prephenate dehydratase low > 36
Variovorax sp. OAS795 0.45 ABID97_RS14080 M3 family metallopeptidase 0.19 ABID97_RS09515 prephenate dehydratase — —
Variovorax sp. SCN45 0.45 GFF963 Oligopeptidase A (EC 3.4.24.70) 0.19 GFF6182 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.44 GFF4214 Oligopeptidase A (EC 3.4.24.70) 0.19 GFF5343 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) low > 90
Acidovorax sp. GW101-3H11 0.44 Ac3H11_4097 Oligopeptidase A (EC 3.4.24.70) 0.20 Ac3H11_2574 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) low > 79
Castellaniella sp019104865 MT123 0.43 ABCV34_RS04180 M3 family metallopeptidase 0.20 ABCV34_RS07110 prephenate dehydratase — —

Not shown: 10 genomes with orthologs for GFF517 only; 3 genomes with orthologs for GFF4179 only