Conservation of cofitness between HP15_2221 and HP15_3905 in Marinobacter adhaerens HP15

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Marinobacter adhaerens HP15 1.0 HP15_2221 pseudouridine synthase, RluA family 1.0 HP15_3905 lipoprotein, YaeC family 0.39 10
Erwinia tracheiphila SCR3 0.48 LU632_RS14855 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.37 LU632_RS19830 MetQ/NlpA family lipoprotein low > 74
Klebsiella michiganensis M5al 0.46 BWI76_RS11050 23S rRNA pseudouridine(955/2504/2580) synthase 0.53 BWI76_RS16670 NLPA lipoprotein low > 92
Pseudomonas putida KT2440 0.46 PP_1906 ribosomal large subunit pseudouridine synthase C 0.71 PP_5165 NLPA lipoprotein low > 96
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_5944 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) 0.70 Pf6N2E2_4174 Methionine ABC transporter substrate-binding protein low > 103
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_20125 23S rRNA pseudouridylate synthase 0.71 AO356_11520 methionine ABC transporter substrate-binding protein low > 104
Pseudomonas sp. RS175 0.45 PFR28_03018 Ribosomal large subunit pseudouridine synthase C 0.69 PFR28_04818 Methionine-binding lipoprotein MetQ low > 88
Pseudomonas sp. S08-1 0.45 OH686_22095 LSU rRNA pseudouridine(955/2504/2580) synthase 0.67 OH686_12270 Methionine ABC transporter substrate-binding protein low > 80
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS23095 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.69 PFLU_RS01080 ABC transporter substrate-binding protein low > 109
Pseudomonas fluorescens SBW25 0.45 PFLU_RS23095 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.69 PFLU_RS01080 ABC transporter substrate-binding protein low > 109
Pseudomonas simiae WCS417 0.45 PS417_21480 23S rRNA pseudouridylate synthase 0.67 PS417_00350 methionine ABC transporter substrate-binding protein low > 88
Vibrio cholerae E7946 ATCC 55056 0.45 CSW01_10130 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.33 CSW01_04635 methionine ABC transporter substrate-binding protein MetQ low > 62
Pseudomonas fluorescens FW300-N2E3 0.45 AO353_01405 23S rRNA pseudouridylate synthase 0.69 AO353_10880 methionine ABC transporter substrate-binding protein low > 101
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_1639 ribosomal large subunit pseudouridine synthase C 0.65 Psyr_0328 NLPA lipoprotein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_1639 ribosomal large subunit pseudouridine synthase C 0.65 Psyr_0328 NLPA lipoprotein low > 86
Pectobacterium carotovorum WPP14 0.44 HER17_RS08615 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.38 HER17_RS04370 MetQ/NlpA family lipoprotein low > 75
Pseudomonas stutzeri RCH2 0.44 Psest_1680 pseudouridine synthase, RluA family 0.74 Psest_4316 ABC-type metal ion transport system, periplasmic component/surface antigen — —
Pseudomonas fluorescens GW456-L13 0.44 PfGW456L13_2097 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) 0.68 PfGW456L13_604 Methionine ABC transporter substrate-binding protein low > 87
Dickeya dianthicola ME23 0.44 DZA65_RS13690 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.41 DZA65_RS08320 ABC transporter substrate-binding protein low > 75
Pseudomonas fluorescens FW300-N1B4 0.44 Pf1N1B4_459 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) 0.68 Pf1N1B4_1714 Methionine ABC transporter substrate-binding protein — —
Dickeya dadantii 3937 0.44 DDA3937_RS13155 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.41 DDA3937_RS07970 ABC transporter substrate-binding protein low > 74
Dickeya dianthicola 67-19 0.44 HGI48_RS13220 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.41 HGI48_RS07725 MetQ/NlpA family ABC transporter substrate-binding protein low > 71
Herbaspirillum seropedicae SmR1 0.42 HSERO_RS09415 ribosomal large subunit pseudouridine synthase C 0.61 HSERO_RS07840 methionine ABC transporter substrate-binding protein low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF121 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) 0.40 GFF5039 Methionine ABC transporter substrate-binding protein low > 90
Ralstonia sp. UNC404CL21Col 0.40 ABZR87_RS10090 RluA family pseudouridine synthase 0.43 ABZR87_RS09540 MetQ/NlpA family ABC transporter substrate-binding protein low > 80
Cupriavidus basilensis FW507-4G11 0.40 RR42_RS14155 pseudouridine synthase 0.41 RR42_RS03045 dioxygenase low > 128
Variovorax sp. OAS795 0.40 ABID97_RS08250 RluA family pseudouridine synthase 0.37 ABID97_RS21750 MetQ/NlpA family ABC transporter substrate-binding protein low > 91
Ralstonia solanacearum PSI07 0.40 RPSI07_RS19085 RluA family pseudouridine synthase 0.42 RPSI07_RS19620 MetQ/NlpA family ABC transporter substrate-binding protein low > 81
Ralstonia solanacearum IBSBF1503 0.40 RALBFv3_RS14375 RluA family pseudouridine synthase 0.43 RALBFv3_RS13850 MetQ/NlpA family lipoprotein low > 76
Ralstonia solanacearum UW163 0.40 UW163_RS11840 RluA family pseudouridine synthase 0.43 UW163_RS15960 MetQ/NlpA family lipoprotein — —
Acidovorax sp. GW101-3H11 0.40 Ac3H11_1590 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) 0.43 Ac3H11_1311 Methionine ABC transporter substrate-binding protein — —
Variovorax sp. SCN45 0.39 GFF3847 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) 0.58 GFF4137 Methionine ABC transporter substrate-binding protein low > 127
Paraburkholderia sabiae LMG 24235 0.39 QEN71_RS04500 RluA family pseudouridine synthase 0.43 QEN71_RS04170 MetQ/NlpA family ABC transporter substrate-binding protein low > 153
Ralstonia solanacearum GMI1000 0.39 RS_RS05155 RluA family pseudouridine synthase 0.42 RS_RS04585 MetQ/NlpA family ABC transporter substrate-binding protein low > 80
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.2616.1 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) 0.60 Xcc-8004.4601.1 Methionine ABC transporter substrate-binding protein low > 74
Paraburkholderia graminis OAS925 0.39 ABIE53_003058 23S rRNA pseudouridine955/2504/2580 synthase 0.42 ABIE53_005156 D-methionine transport system substrate-binding protein low > 113
Paraburkholderia bryophila 376MFSha3.1 0.39 H281DRAFT_04340 23S rRNA pseudouridine955/2504/2580 synthase 0.41 H281DRAFT_01982 D-methionine transport system substrate-binding protein low > 103
Castellaniella sp019104865 MT123 0.39 ABCV34_RS08415 RluA family pseudouridine synthase 0.66 ABCV34_RS09535 MetQ/NlpA family ABC transporter substrate-binding protein low > 48
Burkholderia phytofirmans PsJN 0.38 BPHYT_RS14480 ribosomal large subunit pseudouridine synthase C 0.42 BPHYT_RS02715 dioxygenase low > 109
Dechlorosoma suillum PS 0.38 Dsui_2437 pseudouridine synthase, RluA family 0.30 Dsui_2064 ABC-type metal ion transport system, periplasmic component/surface antigen low > 51
Rhodanobacter denitrificans FW104-10B01 0.37 LRK54_RS17895 RluA family pseudouridine synthase 0.61 LRK54_RS14725 MetQ/NlpA family ABC transporter substrate-binding protein low > 59
Rhodanobacter denitrificans MT42 0.37 LRK55_RS17750 RluA family pseudouridine synthase 0.61 LRK55_RS14440 MetQ/NlpA family ABC transporter substrate-binding protein low > 63
Rhodanobacter sp. FW510-T8 0.37 OKGIIK_07405 rluA 23S rRNA pseudouridine(955/2504/2580) synthase 0.59 OKGIIK_03550 nlpA methionine ABC transporter substrate-binding protein low > 52
Dyella japonica UNC79MFTsu3.2 0.35 ABZR86_RS02725 RluA family pseudouridine synthase 0.61 ABZR86_RS00465 MetQ/NlpA family ABC transporter substrate-binding protein low > 74
Agrobacterium fabrum C58 0.23 Atu1471 ribosomal large subunit pseudouridine synthase C 0.45 Atu4489 outer membrane lipoprotein — —
Rhizobium sp. OAE497 0.22 ABIE40_RS09915 RluA family pseudouridine synthase 0.44 ABIE40_RS23105 MetQ/NlpA family ABC transporter substrate-binding protein low > 107
Sinorhizobium meliloti 1021 0.22 SMc01275 ribosomal large subunit pseudouridine synthase C protein 0.45 SMc03157 outer membrane lipoprotein transmembrane 0.77 7
Rhodospirillum rubrum S1H 0.21 Rru_A2659 Pseudouridine synthase, RluD (NCBI) 0.46 Rru_A2417 Lipoprotein YaeC (NCBI) — —
Azospirillum sp. SherDot2 0.20 MPMX19_01718 Ribosomal large subunit pseudouridine synthase C 0.46 MPMX19_05549 D-methionine-binding lipoprotein MetQ low > 112
Caulobacter crescentus NA1000 0.19 CCNA_02059 ribosomal large subunit pseudouridine synthase C 0.59 CCNA_02747 ABC transporter substrate-binding protein low > 66
Caulobacter crescentus NA1000 Δfur 0.19 CCNA_02059 ribosomal large subunit pseudouridine synthase C 0.59 CCNA_02747 ABC transporter substrate-binding protein low > 67
Azospirillum brasilense Sp245 0.18 AZOBR_RS06905 pseudouridine synthase 0.45 AZOBR_RS19465 dioxygenase low > 97

Not shown: 30 genomes with orthologs for HP15_2221 only; 3 genomes with orthologs for HP15_3905 only