Conservation of cofitness between PS417_20020 and PS417_20040 in Pseudomonas simiae WCS417

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_20020 cobalamin synthase 1.0 PS417_20040 cobyric acid synthase 0.52 7
Pseudomonas fluorescens SBW25-INTG 0.82 PFLU_RS21985 adenosylcobinamide-GDP ribazoletransferase 0.92 PFLU_RS22005 cobyric acid synthase 0.64 1
Pseudomonas fluorescens SBW25 0.82 PFLU_RS21985 adenosylcobinamide-GDP ribazoletransferase 0.92 PFLU_RS22005 cobyric acid synthase 0.84 1
Pseudomonas sp. RS175 0.75 PFR28_03200 Adenosylcobinamide-GDP ribazoletransferase 0.86 PFR28_03204 Cobyric acid synthase 0.70 4
Pseudomonas fluorescens GW456-L13 0.72 PfGW456L13_4234 Cobalamin synthase 0.87 PfGW456L13_4238 Cobyric acid synthase (EC 6.3.5.10) 0.61 13
Pseudomonas syringae pv. syringae B728a 0.68 Psyr_3672 cobalamin-5'-phosphate synthase 0.87 Psyr_3676 adenosylcobyric acid synthase (glutamine-hydrolysing) 0.61 3
Pseudomonas syringae pv. syringae B728a ΔmexB 0.68 Psyr_3672 cobalamin-5'-phosphate synthase 0.87 Psyr_3676 adenosylcobyric acid synthase (glutamine-hydrolysing) low > 86
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_02595 cobalamin synthase 0.87 AO353_02615 cobyric acid synthase 0.57 8
Pseudomonas fluorescens FW300-N2C3 0.62 AO356_19180 cobalamin synthase 0.84 AO356_19160 cobyric acid synthase 0.70 2
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_3715 Cobalamin synthase 0.87 Pf1N1B4_3711 Cobyric acid synthase (EC 6.3.5.10) 0.63 3
Pseudomonas fluorescens FW300-N2E2 0.59 Pf6N2E2_5746 Cobalamin synthase 0.87 Pf6N2E2_5742 Cobyric acid synthase (EC 6.3.5.10) 0.55 3
Pseudomonas putida KT2440 0.53 PP_1681 cobalamin 5'-phosphate synthase / Cobalamin synthase 0.84 PP_1677 Adenosyl-cobyric acid synthase 0.74 8
Pseudomonas sp. S08-1 0.46 OH686_04945 cobalamin 5'-phosphate synthase 0.80 OH686_04965 cobyric acid synthase CobQ low > 80
Pseudomonas stutzeri RCH2 0.42 Psest_3004 cobalamin 5'-phosphate synthase/cobalamin synthase 0.80 Psest_3008 cobyric acid synthase CobQ low > 67
Lysobacter sp. OAE881 0.38 ABIE51_RS04985 adenosylcobinamide-GDP ribazoletransferase 0.69 ABIE51_RS04965 cobyric acid synthase low > 62
Dyella japonica UNC79MFTsu3.2 0.36 ABZR86_RS10880 adenosylcobinamide-GDP ribazoletransferase 0.68 ABZR86_RS10900 cobyric acid synthase low > 74
Rhodanobacter sp. FW510-T8 0.30 OKGIIK_05520 adenosylcobinamide-GDP ribazoletransferase 0.68 OKGIIK_05500 cobyric acid synthase low > 52
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.21 GFF3968 Cobalamin synthase (EC 2.7.8.26) 0.39 GFF3966 Cobyric acid synthase (EC 6.3.5.10) low > 78
Klebsiella michiganensis M5al 0.20 BWI76_RS18750 adenosylcobinamide-GDP ribazoletransferase 0.39 BWI76_RS23010 cobyric acid synthase CobQ — —
Fusobacterium nucleatum SB010 0.19 HUW76_05620 adenosylcobinamide-GDP ribazoletransferase 0.39 HUW76_05230 cobyric acid synthase low > 35
Paraburkholderia sabiae LMG 24235 0.19 QEN71_RS25125 adenosylcobinamide-GDP ribazoletransferase 0.63 QEN71_RS25095 cobyric acid synthase low > 153
Shewanella oneidensis MR-1 0.18 SO1036 cobS cobalamin 5'-phosphate synthase (NCBI ptt file) 0.62 SO1038 cobQ cobyric acid synthase CobQ (NCBI ptt file) low > 76
Hydrogenophaga sp. GW460-11-11-14-LB1 0.18 GFF4000 Cobalamin synthase 0.35 GFF3998 Cobyric acid synthase (EC 6.3.5.10) low > 90
Shewanella loihica PV-4 0.17 Shew_0715 cobalamin 5'-phosphate synthase (RefSeq) 0.60 Shew_0717 cobyric acid synthase (RefSeq) 0.67 15
Agrobacterium fabrum C58 0.17 Atu1891 cobalamin biosynthesis protein 0.40 Atu2808 cobyric acid synthase 0.57 8
Burkholderia phytofirmans PsJN 0.17 BPHYT_RS04870 cobalamin synthase 0.60 BPHYT_RS04900 cobyric acid synthase 0.43 4
Sinorhizobium meliloti 1021 0.16 SMc04215 cobalamin synthase 0.42 SMc04309 cobyric acid synthase — —
Shewanella sp. ANA-3 0.16 Shewana3_3277 cobS cobalamin synthase (RefSeq) 0.62 Shewana3_3275 cobyric acid synthase (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.16 CSW01_06265 adenosylcobinamide-GDP ribazoletransferase 0.63 CSW01_17810 cobyric acid synthase CobQ low > 62
Sphingomonas koreensis DSMZ 15582 0.16 Ga0059261_0627 cobalamin-5'-phosphate synthase (EC 2.7.8.26) 0.43 Ga0059261_0630 adenosylcobyric acid synthase (glutamine-hydrolysing) (EC 6.3.5.10) low > 68
Phaeobacter inhibens DSM 17395 0.16 PGA1_c07560 putative cobalamin-5-phosphate synthase 0.41 PGA1_c24000 cobyric acid synthase CobQ — —
Shewanella amazonensis SB2B 0.16 Sama_0763 cobalamin 5'-phosphate synthase (RefSeq) 0.55 Sama_0765 cobyric acid synthase (RefSeq) low > 62
Paraburkholderia bryophila 376MFSha3.1 0.16 H281DRAFT_00140 cobalamin-5'-phosphate synthase 0.61 H281DRAFT_00146 adenosylcobyric acid synthase (glutamine-hydrolysing) 0.89 6
Ralstonia solanacearum PSI07 0.15 RPSI07_RS12895 adenosylcobinamide-GDP ribazoletransferase 0.67 RPSI07_RS12925 cobyric acid synthase low > 81
Ralstonia solanacearum UW163 0.15 UW163_RS09195 adenosylcobinamide-GDP ribazoletransferase 0.68 UW163_RS09225 cobyric acid synthase — —
Ralstonia solanacearum IBSBF1503 0.15 RALBFv3_RS04475 adenosylcobinamide-GDP ribazoletransferase 0.68 RALBFv3_RS04445 cobyric acid synthase 0.45 12
Ralstonia sp. UNC404CL21Col 0.15 ABZR87_RS00070 adenosylcobinamide-GDP ribazoletransferase 0.68 ABZR87_RS00040 cobyric acid synthase low > 80
Ralstonia solanacearum GMI1000 0.15 RS_RS12030 adenosylcobinamide-GDP ribazoletransferase 0.68 RS_RS12000 cobyric acid synthase low > 80
Herbaspirillum seropedicae SmR1 0.14 HSERO_RS09775 cobalamin synthase 0.63 HSERO_RS13230 cobyric acid synthase 0.48 15
Cupriavidus basilensis FW507-4G11 0.13 RR42_RS16115 cobalamin synthase 0.68 RR42_RS16075 cobyric acid synthase low > 128
Rhodopseudomonas palustris CGA009 0.13 TX73_006455 adenosylcobinamide-GDP ribazoletransferase 0.40 TX73_010800 cobyric acid synthase low > 86
Dechlorosoma suillum PS 0.13 Dsui_0471 cobalamin 5''-phosphate synthase/cobalamin synthase 0.61 Dsui_0542 cobyric acid synthase CobQ low > 51
Dinoroseobacter shibae DFL-12 0.13 Dshi_0787 cobalamin-5-phosphate synthase CobS (RefSeq) 0.37 Dshi_2096 cobyric acid synthase CobQ (RefSeq) — —
Rhizobium sp. OAE497 0.13 ABIE40_RS10725 adenosylcobinamide-GDP ribazoletransferase 0.42 ABIE40_RS11175 cobyric acid synthase 0.93 8
Azospirillum brasilense Sp245 0.13 AZOBR_RS03450 cobalamin synthase 0.45 AZOBR_RS09845 cobyric acid synthase low > 97
Bosea sp. OAE506 0.12 ABIE41_RS21250 adenosylcobinamide-GDP ribazoletransferase 0.38 ABIE41_RS03845 cobyric acid synthase — —
Variovorax sp. SCN45 0.12 GFF424 Cobalamin synthase (EC 2.7.8.26) 0.34 GFF426 Cobyric acid synthase (EC 6.3.5.10) low > 127

Not shown: 16 genomes with orthologs for PS417_20020 only; 17 genomes with orthologs for PS417_20040 only