Conservation of cofitness between PS417_18575 and PS417_19650 in Pseudomonas simiae WCS417

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_18575 aspartate-semialdehyde dehydrogenase 1.0 PS417_19650 chemotaxis protein CheW 0.20 16
Pseudomonas fluorescens SBW25 0.94 PFLU_RS20555 aspartate-semialdehyde dehydrogenase 0.99 PFLU_RS21615 chemotaxis protein CheW low > 109
Pseudomonas fluorescens SBW25-INTG 0.94 PFLU_RS20555 aspartate-semialdehyde dehydrogenase 0.99 PFLU_RS21615 chemotaxis protein CheW low > 109
Pseudomonas fluorescens FW300-N2E2 0.81 Pf6N2E2_68 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 0.87 Pf6N2E2_2564 Positive regulator of CheA protein activity (CheW) low > 103
Pseudomonas sp. RS175 0.81 PFR28_02819 USG-1 protein 0.86 PFR28_00861 Chemotaxis protein CheW low > 88
Pseudomonas fluorescens FW300-N2C3 0.80 AO356_21425 aspartate-semialdehyde dehydrogenase 0.87 AO356_03685 chemotaxis protein CheW 0.27 42
Pseudomonas fluorescens FW300-N2E3 0.80 AO353_20645 aspartate-semialdehyde dehydrogenase 0.90 AO353_18830 chemotaxis protein CheW 0.29 18
Pseudomonas fluorescens GW456-L13 0.80 PfGW456L13_3943 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 0.87 PfGW456L13_4321 Positive regulator of CheA protein activity (CheW) low > 87
Pseudomonas fluorescens FW300-N1B4 0.79 Pf1N1B4_10 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 0.86 Pf1N1B4_3635 Positive regulator of CheA protein activity (CheW) — —
Pseudomonas syringae pv. syringae B728a 0.67 Psyr_1660 Aspartate-semialdehyde dehydrogenase 0.92 Psyr_3428 CheW-like protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.67 Psyr_1660 Aspartate-semialdehyde dehydrogenase 0.92 Psyr_3428 CheW-like protein low > 86
Pseudomonas putida KT2440 0.66 PP_1992 aspartate-semialdehyde dehydrogenase 0.90 PP_4332 Chemotaxis protein CheW 0.15 15
Pseudomonas sp. S08-1 0.58 OH686_04460 Aspartate-semialdehyde dehydrogenase 0.84 OH686_02685 Positive regulator of CheA protein activity (CheW) low > 80
Pseudomonas stutzeri RCH2 0.48 Psest_2587 Aspartate-semialdehyde dehydrogenase 0.91 Psest_1749 Chemotaxis signal transduction protein low > 67
Alteromonas macleodii MIT1002 0.41 MIT1002_02531 Aspartate-semialdehyde dehydrogenase 2 0.74 MIT1002_01110 Chemotaxis protein CheW low > 70
Shewanella loihica PV-4 0.40 Shew_2308 aspartate-semialdehyde dehydrogenase (RefSeq) 0.80 Shew_1391 CheW protein (RefSeq) — —
Shewanella amazonensis SB2B 0.40 Sama_2152 aspartate-semialdehyde dehydrogenase (RefSeq) 0.81 Sama_2272 purine-binding chemotaxis protein CheW (RefSeq) — —
Shewanella oneidensis MR-1 0.39 SO3070 asd aspartate semialdehyde dehydrogenese (NCBI ptt file) 0.80 SO3202 cheW-3 purine-binding chemotaxis protein CheW (NCBI ptt file) — —
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_10520 Aspartate-semialdehyde dehydrogenase 2 0.70 CSW01_10300 chemotaxis protein CheW low > 62
Shewanella sp. ANA-3 0.39 Shewana3_1477 aspartate semialdehyde dehydrogenase (RefSeq) 0.80 Shewana3_1367 CheW protein (RefSeq) — —
Xanthomonas campestris pv. campestris strain 8004 0.38 Xcc-8004.1957.1 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 0.33 Xcc-8004.2882.1 Positive regulator of CheA protein activity (CheW) — —
Lysobacter sp. OAE881 0.37 ABIE51_RS08235 aspartate-semialdehyde dehydrogenase 0.30 ABIE51_RS16920 chemotaxis protein CheW — —
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS01715 aspartate-semialdehyde dehydrogenase 0.30 LRK54_RS13650 chemotaxis protein CheW — —
Rhodanobacter denitrificans MT42 0.35 LRK55_RS01495 aspartate-semialdehyde dehydrogenase 0.30 LRK55_RS13390 chemotaxis protein CheW — —
Dyella japonica UNC79MFTsu3.2 0.35 ABZR86_RS08030 aspartate-semialdehyde dehydrogenase 0.25 ABZR86_RS22225 chemotaxis protein CheW — —
Serratia liquefaciens MT49 0.34 IAI46_17845 aspartate-semialdehyde dehydrogenase 0.32 IAI46_16035 chemotaxis protein CheW low > 86
Enterobacter sp. TBS_079 0.34 MPMX20_03254 USG-1 protein 0.31 MPMX20_02797 Chemotaxis protein CheW low > 85
Escherichia coli Nissle 1917 0.34 ECOLIN_RS13440 aspartate-semialdehyde dehydrogenase 0.32 ECOLIN_RS10775 chemotaxis protein CheW — —
Escherichia coli BL21 0.34 ECD_02244 putative semialdehyde dehydrogenase 0.32 ECD_01858 purine-binding chemotaxis protein — —
Escherichia coli ECRC62 0.34 BNILDI_13220 usg aspartate-semialdehyde dehydrogenase 0.32 BNILDI_15355 cheW chemotaxis protein CheW — —
Escherichia coli ECOR27 0.34 NOLOHH_14300 usg aspartate-semialdehyde dehydrogenase 0.32 NOLOHH_16565 cheW chemotaxis protein CheW — —
Escherichia fergusonii Becca 0.34 EFB2_01539 USG-1 protein 0.32 EFB2_02056 Chemotaxis protein CheW low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.34 OHPLBJKB_01386 USG-1 protein 0.32 OHPLBJKB_01841 Chemotaxis protein CheW low > 73
Escherichia coli BW25113 0.34 b2319 usg hypothetical protein (NCBI) 0.32 b1887 cheW purine-binding chemotaxis protein (NCBI) low > 76
Escherichia coli ECOR38 0.34 HEPCGN_21870 usg aspartate-semialdehyde dehydrogenase 0.32 HEPCGN_04545 cheW chemotaxis protein CheW low > 85
Escherichia coli ECRC99 0.34 KEDOAH_05530 usg aspartate-semialdehyde dehydrogenase 0.32 KEDOAH_01980 cheW chemotaxis protein CheW — —
Dickeya dadantii 3937 0.34 DDA3937_RS14470 aspartate-semialdehyde dehydrogenase 0.32 DDA3937_RS13540 chemotaxis protein CheW 0.55 26
Escherichia coli ECRC102 0.33 NIAGMN_20440 usg aspartate-semialdehyde dehydrogenase 0.32 NIAGMN_01935 cheW chemotaxis protein CheW — —
Desulfovibrio vulgaris Hildenborough JW710 0.33 DVU3048 asd aspartate-semialdehyde dehydrogenase (TIGR) 0.36 DVU1904 cheW-2 chemotaxis protein CheW (TIGR) — —
Escherichia coli ECRC98 0.33 JDDGAC_26625 usg aspartate-semialdehyde dehydrogenase 0.32 JDDGAC_00700 cheW chemotaxis protein CheW — —
Escherichia coli ECRC101 0.33 MCAODC_13705 usg aspartate-semialdehyde dehydrogenase 0.32 MCAODC_19280 cheW chemotaxis protein CheW — —
Escherichia coli ECRC101 0.33 OKFHMN_22665 usg aspartate-semialdehyde dehydrogenase 0.32 OKFHMN_26125 cheW chemotaxis protein CheW — —
Brevundimonas sp. GW460-12-10-14-LB2 0.33 A4249_RS12690 aspartate-semialdehyde dehydrogenase 0.31 A4249_RS15570 chemotaxis protein CheW — —
Agrobacterium fabrum C58 0.33 Atu2490 aspartate-semialdehyde dehydrogenase 0.31 Atu2075 chemotaxis protein — —
Desulfovibrio vulgaris Miyazaki F 0.33 DvMF_2382 aspartate-semialdehyde dehydrogenase (RefSeq) 0.36 DvMF_0792 CheW protein (RefSeq) — —
Dickeya dianthicola ME23 0.33 DZA65_RS15375 aspartate-semialdehyde dehydrogenase 0.32 DZA65_RS14070 chemotaxis protein CheW low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF1935 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 0.33 GFF1668 Positive regulator of CheA protein activity (CheW) low > 78
Dickeya dianthicola 67-19 0.33 HGI48_RS14440 aspartate-semialdehyde dehydrogenase 0.32 HGI48_RS13585 chemotaxis protein CheW — —
Rahnella sp. WP5 0.33 EX31_RS19605 aspartate-semialdehyde dehydrogenase 0.32 EX31_RS11400 chemotaxis protein CheW low > 89
Sinorhizobium meliloti 1021 0.32 SMc04410 aspartate-semialdehyde dehydrogenase 0.31 SMc03008 chemotaxis protein — —
Pectobacterium carotovorum WPP14 0.32 HER17_RS06985 aspartate-semialdehyde dehydrogenase 0.33 HER17_RS08105 chemotaxis protein CheW 0.48 61
Sphingomonas koreensis DSMZ 15582 0.31 Ga0059261_4003 aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 0.33 Ga0059261_1082 Chemotaxis signal transduction protein — —
Erwinia tracheiphila SCR3 0.31 LU632_RS07820 aspartate-semialdehyde dehydrogenase 0.32 LU632_RS13555 cheW chemotaxis protein CheW low > 74
Bosea sp. OAE506 0.31 ABIE41_RS08445 aspartate-semialdehyde dehydrogenase 0.31 ABIE41_RS01675 chemotaxis protein CheW — —
Enterobacter asburiae PDN3 0.31 EX28DRAFT_0285 Aspartate-semialdehyde dehydrogenase 0.32 EX28DRAFT_0663 Chemotaxis signal transduction protein low > 76
Rhodopseudomonas palustris CGA009 0.31 TX73_001190 aspartate-semialdehyde dehydrogenase 0.27 TX73_000720 chemotaxis protein CheW — —
Rhizobium sp. OAE497 0.31 ABIE40_RS19095 aspartate-semialdehyde dehydrogenase 0.32 ABIE40_RS15985 chemotaxis protein CheW — —
Pantoea sp. MT58 0.31 IAI47_06240 aspartate-semialdehyde dehydrogenase 0.32 IAI47_08305 chemotaxis protein CheW low > 76
Magnetospirillum magneticum AMB-1 0.30 AMB_RS03035 aspartate-semialdehyde dehydrogenase 0.24 AMB_RS01645 chemotaxis protein CheW — —
Caulobacter crescentus NA1000 0.30 CCNA_00253 aspartate-semialdehyde dehydrogenase 0.30 CCNA_00803 chemotaxis protein cheW low > 66
Caulobacter crescentus NA1000 Δfur 0.30 CCNA_00253 aspartate-semialdehyde dehydrogenase 0.30 CCNA_00803 chemotaxis protein cheW low > 67
Phaeobacter inhibens DSM 17395 0.30 PGA1_c31480 aspartate-semialdehyde dehydrogenase Asd 0.28 PGA1_262p02110 putative chemotaxis protein CheW — —
Azospirillum sp. SherDot2 0.30 MPMX19_02000 Aspartate-semialdehyde dehydrogenase 2 0.29 MPMX19_06746 Chemotaxis protein CheW low > 112
Synechococcus elongatus PCC 7942 0.27 Synpcc7942_1848 asd aspartate-semialdehyde dehydrogenase 0.16 Synpcc7942_1016 cheW CheW protein — —

Not shown: 17 genomes with orthologs for PS417_18575 only; 19 genomes with orthologs for PS417_19650 only