Conservation of cofitness between GFF4954 and GFF3670 in Sphingobium sp. HT1-2

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF4954 Phosphotransferase involved in threonylcarbamoyladenosine t(6)A37 formation in tRNA 1.0 GFF3670 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) 0.82 1
Rhodospirillum rubrum S1H 0.37 Rru_A3437 Aminoglycoside phosphotransferase (NCBI) 0.20 Rru_A3163 3-deoxy-D-manno-octulosonate cytidylyltransferase (NCBI) — —
Magnetospirillum magneticum AMB-1 0.35 AMB_RS21475 aminoglycoside phosphotransferase 0.20 AMB_RS21095 3-deoxy-manno-octulosonate cytidylyltransferase — —
Dinoroseobacter shibae DFL-12 0.32 Dshi_3435 aminoglycoside phosphotransferase (RefSeq) 0.29 Dshi_3575 3-deoxy-D-manno-octulosonate cytidylyltransferase (RefSeq) — —
Azospirillum brasilense Sp245 0.31 AZOBR_RS00580 aminoglycoside phosphotransferase 0.19 AZOBR_RS03860 3-deoxy-manno-octulosonate cytidylyltransferase — —
Phaeobacter inhibens DSM 17395 0.31 PGA1_c35340 putative phosphotransferase 0.26 PGA1_c34490 3-deoxy-manno-octulosonate cytidylyltransferase KdsB — —
Azospirillum sp. SherDot2 0.30 MPMX19_02725 N-acetylmuramate/N-acetylglucosamine kinase 0.20 MPMX19_02161 3-deoxy-manno-octulosonate cytidylyltransferase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.29 A4249_RS11275 phosphotransferase 0.23 A4249_RS15095 3-deoxy-manno-octulosonate cytidylyltransferase — —
Caulobacter crescentus NA1000 0.26 CCNA_03649 Ser/Thr kinase-related phosphotransferase 0.20 CCNA_03029 3-deoxy-manno-octulosonate cytidylyltransferase — —
Caulobacter crescentus NA1000 Δfur 0.26 CCNA_03649 Ser/Thr kinase-related phosphotransferase 0.20 CCNA_03029 3-deoxy-manno-octulosonate cytidylyltransferase — —
Pseudomonas aeruginosa PA14 0.26 IKLFDK_22430 N-acetylmuramate/N-acetylglucosamine kinase 0.21 IKLFDK_15155 3-deoxy-manno-octulosonate cytidylyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_4809 COG3178: Predicted phosphotransferase related to Ser/Thr protein kinases 0.18 Pf6N2E2_5935 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) — —
Pseudomonas syringae pv. syringae B728a 0.25 Psyr_4623 Aminoglycoside phosphotransferase 0.19 Psyr_1636 3-deoxy-D-manno-octulosonate cytidylyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.25 Psyr_4623 Aminoglycoside phosphotransferase 0.19 Psyr_1636 3-deoxy-D-manno-octulosonate cytidylyltransferase — —
Pseudomonas stutzeri RCH2 0.25 Psest_3664 Predicted phosphotransferase related to Ser/Thr protein kinases 0.19 Psest_1676 3-deoxy-D-manno-octulosonate cytidylyltransferase — —
Dechlorosoma suillum PS 0.25 Dsui_1588 aminoglycoside phosphotransferase 0.18 Dsui_3263 3-deoxy-D-manno-octulosonate cytidylyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.25 AO356_14355 aminoglycoside phosphotransferase 0.18 AO356_20085 3-deoxy-manno-octulosonate cytidylyltransferase — —
Pseudomonas fluorescens FW300-N2E3 0.25 AO353_07295 aminoglycoside phosphotransferase 0.19 AO353_01440 3-deoxy-manno-octulosonate cytidylyltransferase — —
Pseudomonas sp. S08-1 0.25 OH686_15060 Phosphotransferase 0.18 OH686_22070 3-deoxy-D-manno-octulosonate cytidylyltransferase — —
Castellaniella sp019104865 MT123 0.25 ABCV34_RS09505 phosphotransferase 0.22 ABCV34_RS05355 3-deoxy-manno-octulosonate cytidylyltransferase — —
Pseudomonas sp. DMC3 0.25 GFF33 N-acetylmuramate/N-acetylglucosamine kinase 0.19 GFF4773 3-deoxy-manno-octulosonate cytidylyltransferase — —
Pseudomonas fluorescens GW456-L13 0.24 PfGW456L13_1204 COG3178: Predicted phosphotransferase related to Ser/Thr protein kinases 0.19 PfGW456L13_2088 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) — —
Acinetobacter baumannii LAC-4 0.24 RR41_RS12015 phosphotransferase 0.22 RR41_RS12060 3-deoxy-manno-octulosonate cytidylyltransferase — —
Pseudomonas sp. RS175 0.24 PFR28_04060 N-acetylmuramate/N-acetylglucosamine kinase 0.21 PFR28_03026 3-deoxy-manno-octulosonate cytidylyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.24 PFLU_RS27445 phosphotransferase 0.18 PFLU_RS18375 3-deoxy-manno-octulosonate cytidylyltransferase — —
Pseudomonas fluorescens SBW25 0.24 PFLU_RS27445 phosphotransferase 0.18 PFLU_RS18375 3-deoxy-manno-octulosonate cytidylyltransferase — —
Marinobacter adhaerens HP15 0.24 HP15_3282 aminoglycoside phosphotransferase 0.22 HP15_2061 3-deoxy-D-manno-octulosonate cytidylyltransferase — —
Ralstonia solanacearum PSI07 0.23 RPSI07_RS21480 aminoglycoside phosphotransferase 0.16 RPSI07_RS12210 3-deoxy-manno-octulosonate cytidylyltransferase — —
Pseudomonas sp. SVBP6 0.23 COO64_RS22490 aminoglycoside phosphotransferase family protein 0.18 COO64_RS05865 kdsB 3-deoxy-manno-octulosonate cytidylyltransferase — —
Pseudomonas putida KT2440 0.23 PP_0405 conserved protein of unknown function 0.19 PP_1902 3-deoxy-manno-octulosonate cytidylyltransferase — —
Pseudomonas simiae WCS417 0.23 PS417_25790 aminoglycoside phosphotransferase 0.19 PS417_16325 3-deoxy-manno-octulosonate cytidylyltransferase — —
Ralstonia solanacearum UW163 0.23 UW163_RS01850 aminoglycoside phosphotransferase 0.16 UW163_RS08540 3-deoxy-manno-octulosonate cytidylyltransferase — —
Ralstonia solanacearum IBSBF1503 0.23 RALBFv3_RS11735 aminoglycoside phosphotransferase 0.16 RALBFv3_RS05085 3-deoxy-manno-octulosonate cytidylyltransferase — —
Acinetobacter radioresistens SK82 0.23 MPMX26_01212 N-acetylmuramate/N-acetylglucosamine kinase 0.23 MPMX26_01221 3-deoxy-manno-octulosonate cytidylyltransferase — —
Ralstonia sp. UNC404CL21Col 0.23 ABZR87_RS07690 aminoglycoside phosphotransferase family protein 0.15 ABZR87_RS00735 3-deoxy-manno-octulosonate cytidylyltransferase — —
Ralstonia solanacearum GMI1000 0.22 RS_RS02560 aminoglycoside phosphotransferase 0.16 RS_RS12695 3-deoxy-manno-octulosonate cytidylyltransferase — —
Rhodanobacter denitrificans MT42 0.22 LRK55_RS02855 phosphotransferase 0.24 LRK55_RS00125 3-deoxy-manno-octulosonate cytidylyltransferase — —
Rhodanobacter denitrificans FW104-10B01 0.22 LRK54_RS03105 phosphotransferase 0.24 LRK54_RS00385 3-deoxy-manno-octulosonate cytidylyltransferase — —
Pseudomonas segetis P6 0.22 MPMX49_00883 N-acetylmuramate/N-acetylglucosamine kinase 0.20 MPMX49_02058 3-deoxy-manno-octulosonate cytidylyltransferase — —
Cupriavidus basilensis FW507-4G11 0.22 RR42_RS02765 aminoglycoside phosphotransferase 0.18 RR42_RS03450 3-deoxy-manno-octulosonate cytidylyltransferase — —
Pseudomonas lactucae CFBP13502 0.21 GEMAOFIL_05278 N-acetylmuramate/N-acetylglucosamine kinase 0.19 GEMAOFIL_03592 3-deoxy-manno-octulosonate cytidylyltransferase — —
Rhodanobacter sp. FW510-T8 0.21 OKGIIK_09975 Aminoglycoside phosphotransferase 0.24 OKGIIK_06925 kdsB 3-deoxy-manno-octulosonate cytidylyltransferase — —
Shewanella loihica PV-4 0.21 Shew_0883 aminoglycoside phosphotransferase (RefSeq) 0.22 Shew_1856 3-deoxy-manno-octulosonate cytidylyltransferase (RefSeq) — —
Acidovorax sp. GW101-3H11 0.20 Ac3H11_4324 COG3178: Predicted phosphotransferase related to Ser/Thr protein kinases 0.17 Ac3H11_2387 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) — —
Shewanella oneidensis MR-1 0.20 SO3635 hypothetical phosphotransferase (NCBI ptt file) 0.20 SO2478 kdsB 3-deoxy-D-manno-octulosonate cytidylyltransferase (NCBI ptt file) — —
Shewanella sp. ANA-3 0.20 Shewana3_3205 aminoglycoside phosphotransferase (RefSeq) 0.20 Shewana3_1906 3-deoxy-manno-octulosonate cytidylyltransferase (RefSeq) — —
Paraburkholderia sabiae LMG 24235 0.20 QEN71_RS02110 phosphotransferase 0.15 QEN71_RS02820 3-deoxy-manno-octulosonate cytidylyltransferase — —
Burkholderia phytofirmans PsJN 0.20 BPHYT_RS03285 aminoglycoside phosphotransferase 0.21 BPHYT_RS31015 3-deoxy-manno-octulosonate cytidylyltransferase 2 low > 109
Paraburkholderia graminis OAS925 0.19 ABIE53_000796 aminoglycoside/choline kinase family phosphotransferase 0.16 ABIE53_003347 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) — —
Kangiella aquimarina DSM 16071 0.19 B158DRAFT_0792 Predicted phosphotransferase related to Ser/Thr protein kinases 0.20 B158DRAFT_1601 3-deoxy-D-manno-octulosonate cytidylyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.19 H281DRAFT_04636 hypothetical protein 0.16 H281DRAFT_04112 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) — —
Xanthomonas campestris pv. campestris strain 8004 0.17 Xcc-8004.1681.1 hypothetical protein 0.24 Xcc-8004.2474.1 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) — —

Not shown: 2 genomes with orthologs for GFF4954 only; 61 genomes with orthologs for GFF3670 only