Conservation of cofitness between Psest_0257 and Psest_3720 in Pseudomonas stutzeri RCH2

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_0257 Predicted Zn-dependent peptidases 1.0 Psest_3720 penicillin-binding protein, 1A family 0.40 1
Pseudomonas sp. S08-1 0.81 OH686_14230 peptidase, M16 family 0.75 OH686_10055 Multimodular transpeptidase-transglycosylase low > 80
Pseudomonas sp. RS175 0.78 PFR28_04260 putative zinc protease 0.72 PFR28_05006 Penicillin-binding protein 1A low > 88
Pseudomonas fluorescens GW456-L13 0.77 PfGW456L13_992 FIG015547: peptidase, M16 family 0.68 PfGW456L13_282 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) low > 87
Pseudomonas syringae pv. syringae B728a 0.77 Psyr_4752 Insulinase-like:Peptidase M16, C-terminal 0.72 Psyr_0402 Peptidoglycan glycosyltransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.77 Psyr_4752 Insulinase-like:Peptidase M16, C-terminal 0.72 Psyr_0402 Peptidoglycan glycosyltransferase low > 86
Pseudomonas fluorescens FW300-N2C3 0.77 AO356_13330 peptidase M16 0.72 AO356_09420 peptidase 0.30 54
Pseudomonas fluorescens FW300-N1B4 0.77 Pf1N1B4_2322 FIG015547: peptidase, M16 family 0.72 Pf1N1B4_1544 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) low > 87
Pseudomonas fluorescens SBW25-INTG 0.76 PFLU_RS28460 insulinase family protein 0.70 PFLU_RS02000 penicillin-binding protein 1A 0.28 41
Pseudomonas fluorescens SBW25 0.76 PFLU_RS28460 insulinase family protein 0.70 PFLU_RS02000 penicillin-binding protein 1A 0.83 2
Pseudomonas fluorescens FW300-N2E2 0.76 Pf6N2E2_4581 FIG015547: peptidase, M16 family 0.68 Pf6N2E2_3761 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) low > 103
Pseudomonas fluorescens FW300-N2E3 0.76 AO353_08255 peptidase M16 0.72 AO353_12470 peptidase low > 101
Pseudomonas simiae WCS417 0.75 PS417_26815 peptidase M16 0.70 PS417_01955 peptidase low > 88
Pseudomonas putida KT2440 0.75 PP_5112 putative processin peptidase 0.72 PP_5084 penicillin-insensitive transglycosylase/penicillin-sensitive transpeptidase low > 96
Acinetobacter radioresistens SK82 0.44 MPMX26_01630 putative zinc protease 0.41 MPMX26_02817 Penicillin-binding protein 1A
Dechlorosoma suillum PS 0.40 Dsui_1025 putative Zn-dependent peptidase 0.38 Dsui_1186 penicillin-binding protein, 1A family
Cupriavidus basilensis FW507-4G11 0.40 RR42_RS01980 peptidase M16 0.37 RR42_RS19040 penicillin-binding protein
Herbaspirillum seropedicae SmR1 0.39 HSERO_RS20710 peptidase M16 0.36 HSERO_RS20890 penicillin-binding protein 1A
Ralstonia solanacearum IBSBF1503 0.39 RALBFv3_RS11060 insulinase family protein 0.34 RALBFv3_RS06970 penicillin-binding protein 1A
Ralstonia solanacearum UW163 0.39 UW163_RS02520 insulinase family protein 0.34 UW163_RS06645 penicillin-binding protein 1A
Ralstonia solanacearum GMI1000 0.39 RS_RS01910 insulinase family protein 0.34 RS_RS14915 penicillin-binding protein 1A
Ralstonia solanacearum PSI07 0.38 RPSI07_RS22240 insulinase family protein 0.34 RPSI07_RS10265 penicillin-binding protein 1A
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS06950 pitrilysin family protein 0.35 ABZR87_RS02625 penicillin-binding protein 1A
Acidovorax sp. GW101-3H11 0.34 Ac3H11_3875 FIG015547: peptidase, M16 family 0.34 Ac3H11_4700 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)
Hydrogenophaga sp. GW460-11-11-14-LB1 0.32 GFF815 FIG015547: peptidase, M16 family 0.34 GFF1338 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) low > 90
Variovorax sp. SCN45 0.32 GFF2316 FIG015547: peptidase, M16 family 0.34 GFF3310 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) low > 127
Rhodospirillum rubrum S1H 0.32 Rru_A2972 Peptidase M16-like (NCBI) 0.32 Rru_A2147 Penicillin-binding protein 1A (NCBI)
Magnetospirillum magneticum AMB-1 0.31 AMB_RS04270 insulinase family protein 0.33 AMB_RS16340 penicillin-binding protein 1A low > 64
Variovorax sp. OAS795 0.30 ABID97_RS23885 pitrilysin family protein 0.33 ABID97_RS02790 penicillin-binding protein 1A low > 91
Azospirillum sp. SherDot2 0.29 MPMX19_00522 putative zinc protease 0.31 MPMX19_00340 Penicillin-binding protein 1A
Bosea sp. OAE506 0.27 ABIE41_RS23245 pitrilysin family protein 0.27 ABIE41_RS16150 penicillin-binding protein 1A low > 77
Rhodopseudomonas palustris CGA009 0.27 TX73_022675 pitrilysin family protein 0.29 TX73_012680 penicillin-binding protein 1A
Azospirillum brasilense Sp245 0.26 AZOBR_RS05060 zinc protease 0.32 AZOBR_RS11840 penicillin-binding protein 1A
Dinoroseobacter shibae DFL-12 0.26 Dshi_0361 peptidase M16 domain protein (RefSeq) 0.27 Dshi_1171 penicillin-binding protein, 1A family (RefSeq)
Pontibacter actiniarum KMM 6156, DSM 19842 0.25 CA264_16675 peptidase M16 0.17 CA264_20540 transglycosylase low > 74
Shewanella loihica PV-4 0.24 Shew_3581 peptidase M16 domain-containing protein (RefSeq) 0.39 Shew_0207 1A family penicillin-binding protein (RefSeq)
Phocaeicola dorei CL03T12C01 0.23 ABI39_RS02105 insulinase family protein 0.14 ABI39_RS17395 transglycosylase domain-containing protein
Phaeobacter inhibens DSM 17395 0.23 PGA1_c32820 peptidase, M16 family 0.26 PGA1_c20280 penicillin-binding protein 1A MrcA 0.49 20
Shewanella amazonensis SB2B 0.23 Sama_3444 hypothetical protein (RefSeq) 0.40 Sama_3374 penicillin-binding protein 1A (RefSeq) low > 62
Phocaeicola vulgatus CL09T03C04 0.22 HMPREF1058_RS02765 insulinase family protein 0.13 HMPREF1058_RS03825 transglycosylase domain-containing protein
Mucilaginibacter yixingensis YX-36 DSM 26809 0.22 ABZR88_RS10340 pitrilysin family protein 0.17 ABZR88_RS02795 penicillin-binding protein 1A low > 71
Shewanella oneidensis MR-1 0.22 SO4537.2 hypothetical Zn-dependent peptidase (NCBI ptt file) 0.41 SO0280 mrcA penicillin-binding protein 1A (NCBI ptt file)
Shewanella sp. ANA-3 0.22 Shewana3_3940 peptidase M16 domain-containing protein (RefSeq) 0.41 Shewana3_3900 1A family penicillin-binding protein (RefSeq)
Bacteroides thetaiotaomicron VPI-5482 0.21 BT3803 putative zinc protease (NCBI ptt file) 0.15 BT0743 penicillin-binding protein 1A (PBP-1a) (NCBI ptt file)
Pedobacter sp. GW460-11-11-14-LB5 0.21 CA265_RS10705 peptidase M16 0.17 CA265_RS09720 transglycosylase low > 88
Rhodanobacter sp. FW510-T8 0.21 OKGIIK_14305 insulinase family protein 0.42 OKGIIK_12065 Penicillin-binding protein 1A low > 52
Echinicola vietnamensis KMM 6221, DSM 17526 0.20 Echvi_1780 Predicted Zn-dependent peptidases 0.17 Echvi_0618 Membrane carboxypeptidase/penicillin-binding protein
Bacteroides ovatus ATCC 8483 0.20 BACOVA_03649 peptidase M16 inactive domain protein 0.14 BACOVA_02478 transglycosylase
Rhodanobacter denitrificans FW104-10B01 0.20 LRK54_RS07805 insulinase family protein 0.42 LRK54_RS11830 penicillin-binding protein 1A low > 59
Rhodanobacter denitrificans MT42 0.20 LRK55_RS07535 pitrilysin family protein 0.42 LRK55_RS11555 penicillin-binding protein 1A low > 63
Sinorhizobium meliloti 1021 0.13 SMc00451 processing protease 0.28 SMc01334 penicillin-binding 1A transmembrane protein
Rhizobium sp. OAE497 0.12 ABIE40_RS04225 pitrilysin family protein 0.29 ABIE40_RS07555 penicillin-binding protein 1A
Agrobacterium fabrum C58 0.12 Atu0786 peptidase, family M16 0.28 Atu1341 penicillin-binding protein 1a

Not shown: 4 genomes with orthologs for Psest_0257 only; 44 genomes with orthologs for Psest_3720 only