| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas stutzeri RCH2 | 1.0 | Psest_3476 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | 1.0 | Psest_3320 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.18 | 12 |
| Pseudomonas sp. RS175 | 0.74 | PFR28_02328 | | Transcriptional regulatory protein QseB | 0.79 | PFR28_00161 | | Metalloprotease TldD | low | > 88 |
| Pseudomonas sp. S08-1 | 0.74 | OH686_04665 | | Two-component system response regulator QseB | 0.79 | OH686_08580 | | TldD protein, part of TldE/TldD proteolytic complex | low | > 80 |
| Pseudomonas fluorescens FW300-N2C3 | 0.73 | AO356_23845 | | XRE family transcriptional regulator | 0.80 | AO356_07095 | | protease TldD | 0.23 | 29 |
| Pseudomonas fluorescens SBW25 | 0.72 | PFLU_RS15245 | | response regulator | 0.80 | PFLU_RS04340 | | metalloprotease TldD | low | > 109 |
| Pseudomonas simiae WCS417 | 0.72 | PS417_13595 | | XRE family transcriptional regulator | 0.80 | PS417_04285 | | protease TldD | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.72 | PFLU_RS15245 | | response regulator | 0.80 | PFLU_RS04340 | | metalloprotease TldD | low | > 109 |
| Pseudomonas fluorescens FW300-N2E2 | 0.72 | Pf6N2E2_1539 | | Two-component system response regulator QseB | 0.80 | Pf6N2E2_3280 | | TldD protein, part of TldE/TldD proteolytic complex | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.72 | Pf1N1B4_4454 | | Two-component system response regulator QseB | 0.80 | Pf1N1B4_1092 | | TldD protein, part of TldE/TldD proteolytic complex | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.71 | PfGW456L13_3169 | | Two-component system response regulator QseB | 0.80 | PfGW456L13_5026 | | TldD protein, part of TldE/TldD proteolytic complex | low | > 87 |
| Pseudomonas putida KT2440 | 0.70 | PP_2713 | | DNA-binding response regulator | 0.81 | PP_0940 | | putative protease involved in Microcin B17 maturation and in sensitivity to the DNA gyrase inhibitor LetD | low | > 96 |
| Pseudomonas syringae pv. syringae B728a | 0.62 | Psyr_3511 | | Response regulator receiver:Transcriptional regulatory protein, C-terminal | 0.81 | Psyr_4156 | | microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62 | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.62 | Psyr_3511 | | Response regulator receiver:Transcriptional regulatory protein, C-terminal | 0.81 | Psyr_4156 | | microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62 | low | > 86 |
| Paraburkholderia graminis OAS925 | 0.59 | ABIE53_003418 | | two-component system response regulator QseB | 0.59 | ABIE53_000851 | | TldD protein | low | > 113 |
| Burkholderia phytofirmans PsJN | 0.58 | BPHYT_RS16220 | | transcriptional regulator | 0.58 | BPHYT_RS03540 | | peptidase C69 | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.58 | H281DRAFT_04180 | | two component transcriptional regulator, winged helix family | 0.59 | H281DRAFT_04688 | | microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62 | low | > 103 |
| Herbaspirillum seropedicae SmR1 | 0.57 | HSERO_RS21985 | | transcriptional regulator | 0.59 | HSERO_RS07155 | | peptidase C69 | low | > 78 |
| Paraburkholderia sabiae LMG 24235 | 0.56 | QEN71_RS02475 | | response regulator | 0.58 | QEN71_RS26555 | | metalloprotease TldD | low | > 153 |
| Dechlorosoma suillum PS | 0.54 | Dsui_2248 | | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | 0.58 | Dsui_3401 | | putative Zn-dependent protease-like protein | low | > 51 |
| Cupriavidus basilensis FW507-4G11 | 0.54 | RR42_RS37390 | | XRE family transcriptional regulator | 0.61 | RR42_RS05875 | | protease TldD | low | > 128 |
| Variovorax sp. SCN45 | 0.54 | GFF1175 | | Two-component system response regulator QseB | 0.58 | GFF4449 | | TldD protein, part of TldE/TldD proteolytic complex | low | > 127 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.54 | GFF700 | | Two-component system response regulator QseB | 0.58 | GFF580 | | TldD protein, part of TldE/TldD proteolytic complex | low | > 90 |
| Variovorax sp. OAS795 | 0.53 | ABID97_RS14955 | | response regulator | 0.59 | ABID97_RS06335 | | metalloprotease TldD | low | > 91 |
| Acidovorax sp. GW101-3H11 | 0.53 | Ac3H11_3946 | | Two-component system response regulator QseB | 0.59 | Ac3H11_4036 | | TldD protein, part of TldE/TldD proteolytic complex | low | > 79 |
| Ralstonia sp. UNC404CL21Col | 0.53 | ABZR87_RS22890 | | response regulator transcription factor | 0.60 | ABZR87_RS01105 | | metalloprotease TldD | low | > 80 |
| Ralstonia solanacearum GMI1000 | 0.52 | RS_RS24590 | | DNA-binding response regulator | 0.60 | RS_RS13315 | | metalloprotease TldD | low | > 80 |
| Ralstonia solanacearum IBSBF1503 | 0.51 | RALBFv3_RS16415 | | DNA-binding response regulator | 0.59 | RALBFv3_RS05455 | | metalloprotease TldD | low | > 76 |
| Ralstonia solanacearum UW163 | 0.51 | UW163_RS17155 | | DNA-binding response regulator | 0.59 | UW163_RS08170 | | metalloprotease TldD | — | — |
| Ralstonia solanacearum PSI07 | 0.50 | RPSI07_RS07290 | | DNA-binding response regulator | 0.59 | RPSI07_RS11850 | | metalloprotease TldD | low | > 81 |
| Dickeya dianthicola 67-19 | 0.50 | HGI48_RS21345 | | response regulator | 0.66 | HGI48_RS01380 | | metalloprotease TldD | low | > 71 |
| Dickeya dianthicola ME23 | 0.49 | DZA65_RS22325 | | response regulator | 0.65 | DZA65_RS01440 | | metalloprotease TldD | low | > 75 |
| Pseudomonas fluorescens FW300-N2E3 | 0.49 | AO353_23010 | | XRE family transcriptional regulator | 0.80 | AO353_05215 | | protease TldD | low | > 101 |
| Pantoea sp. MT58 | 0.49 | IAI47_00340 | | response regulator | 0.67 | IAI47_02465 | | metalloprotease TldD | low | > 76 |
| Alteromonas macleodii MIT1002 | 0.48 | MIT1002_00810 | | Transcriptional regulatory protein BasR | 0.65 | MIT1002_00227 | | protease TldD | low | > 70 |
| Vibrio cholerae E7946 ATCC 55056 | 0.47 | CSW01_19595 | | DNA-binding response regulator | 0.61 | CSW01_02220 | | metalloprotease TldD | low | > 62 |
| Castellaniella sp019104865 MT123 | 0.47 | ABCV34_RS11770 | | response regulator | 0.58 | ABCV34_RS02590 | | metalloprotease TldD | low | > 48 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.47 | OHPLBJKB_00677 | | Transcriptional regulatory protein QseB | 0.64 | OHPLBJKB_00460 | | Metalloprotease TldD | low | > 73 |
| Rhodanobacter denitrificans FW104-10B01 | 0.46 | LRK54_RS14145 | | response regulator transcription factor | 0.63 | LRK54_RS03395 | | metalloprotease TldD | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.46 | LRK55_RS13865 | | response regulator transcription factor | 0.63 | LRK55_RS03145 | | metalloprotease TldD | low | > 63 |
| Lysobacter sp. OAE881 | 0.45 | ABIE51_RS00875 | | response regulator transcription factor | 0.65 | ABIE51_RS06795 | | metalloprotease TldD | low | > 62 |
| Pectobacterium carotovorum WPP14 | 0.45 | HER17_RS21560 | | response regulator | 0.64 | HER17_RS20140 | | metalloprotease TldD | low | > 75 |
| Shewanella oneidensis MR-1 | 0.45 | SO2104 | | DNA-binding response regulator YgiX, putative (NCBI ptt file) | 0.62 | SO4091 | tldD | tldD protein (NCBI ptt file) | low | > 76 |
| Serratia liquefaciens MT49 | 0.45 | IAI46_21235 | | response regulator | 0.65 | IAI46_22685 | | metalloprotease TldD | low | > 86 |
| Sinorhizobium meliloti 1021 | 0.44 | SM_b20722 | | two-component response regulator protein | 0.50 | SMc00960 | | hypothetical protein | low | > 103 |
| Shewanella sp. ANA-3 | 0.44 | Shewana3_1885 | | two component transcriptional regulator (RefSeq) | 0.65 | Shewana3_3641 | | microcin-processing peptidase 2 (RefSeq) | low | > 73 |
| Dyella japonica UNC79MFTsu3.2 | 0.44 | ABZR86_RS01270 | | response regulator | 0.65 | ABZR86_RS21715 | | metalloprotease TldD | low | > 74 |
| Mycobacterium tuberculosis H37Rv | 0.44 | Rv0981 | | Mycobacterial persistence regulator MRPA (two component response transcriptional regulatory protein) | 0.08 | Rv2315c | | Conserved protein | low | > 58 |
| Dickeya dadantii 3937 | 0.43 | DDA3937_RS19350 | | two-component system response regulator PmrA | 0.66 | DDA3937_RS01460 | | metalloprotease TldD | low | > 74 |
| Rhodanobacter sp. FW510-T8 | 0.43 | OKGIIK_14050 | ompR | DNA-binding response regulator | 0.65 | OKGIIK_10280 | tldD | metalloprotease TldD | low | > 52 |
| Rhizobium sp. OAE497 | 0.42 | ABIE40_RS17030 | | response regulator | 0.52 | ABIE40_RS04050 | | metalloprotease TldD | 0.75 | 8 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.41 | A4249_RS11495 | | response regulator transcription factor | 0.49 | A4249_RS10860 | | metalloprotease TldD | low | > 48 |
| Synechococcus elongatus PCC 7942 | 0.35 | Synpcc7942_B2647 | | response regulator receiver domain protein (CheY-like) | 0.23 | Synpcc7942_1127 | tldD | microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62 | low | > 38 |
Not shown: 4 genomes with orthologs for Psest_3476 only; 39 genomes with orthologs for Psest_3320 only