Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 1.0 | GFF1370 | | Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) | 1.0 | GFF1365 | | Putative glutathione transporter, ATP-binding component | 0.80 | 3 |
Acidovorax sp. GW101-3H11 | 0.89 | Ac3H11_2047 | | Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) | 0.80 | Ac3H11_2052 | | Putative glutathione transporter, ATP-binding component | 0.66 | 5 |
Variovorax sp. OAS795 | 0.88 | ABID97_RS07030 | | ABC transporter permease | 0.77 | ABID97_RS07055 | | dipeptide ABC transporter ATP-binding protein | low | > 91 |
Variovorax sp. SCN45 | 0.87 | GFF5252 | | ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) | 0.78 | GFF5257 | | ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) | low | > 127 |
Dinoroseobacter shibae DFL-12 | 0.66 | Dshi_0881 | | binding-protein-dependent transport systems inner membrane component (RefSeq) | 0.51 | Dshi_0885 | | oligopeptide/dipeptide ABC transporter, ATPase subunit (RefSeq) | low | > 64 |
Phaeobacter inhibens DSM 17395 | 0.65 | PGA1_c06790 | | putative peptide ABC transporter, permease protein | 0.51 | PGA1_c06820 | | dipeptide transport ATP-binding protein DppF | low | > 62 |
Bosea sp. OAE506 | 0.62 | ABIE41_RS23470 | | ABC transporter permease | 0.58 | ABIE41_RS23455 | | oligopeptide/dipeptide ABC transporter ATP-binding protein | low | > 77 |
Agrobacterium fabrum C58 | 0.61 | Atu4696 | | oligopeptide ABC transporter permease | 0.54 | Atu4701 | | oligopeptide ABC transporter ATPase | low | > 89 |
Sinorhizobium meliloti 1021 | 0.58 | SMc02418 | | peptide transport system permease ABC transporter protein | 0.55 | SMc02424 | | oligopeptide transport ATP-binding ABC transporter protein | low | > 103 |
Cupriavidus basilensis FW507-4G11 | 0.46 | RR42_RS18205 | | ABC transporter permease | 0.46 | RR42_RS35215 | | peptide ABC transporter ATP-binding protein | low | > 128 |
Desulfovibrio vulgaris Hildenborough JW710 | 0.46 | DVU0168 | | oligopeptide/dipeptide ABC transporter, permease protein (TIGR) | 0.47 | DVU0165 | oppF | oligopeptide/dipeptide ABC transporter, ATP-binding protein (TIGR) | low | > 55 |
Vibrio cholerae E7946 ATCC 55056 | 0.46 | CSW01_00920 | | ABC transporter permease | 0.40 | CSW01_05565 | | ABC transporter ATP-binding protein | low | > 62 |
Desulfovibrio vulgaris Miyazaki F | 0.45 | DvMF_1828 | | binding-protein-dependent transport systems inner membrane component (RefSeq) | 0.47 | DvMF_1825 | | oligopeptide/dipeptide ABC transporter, ATPase subunit (RefSeq) | 0.82 | 2 |
Ralstonia solanacearum PSI07 | 0.44 | RPSI07_RS10840 | | ABC transporter permease | 0.44 | RPSI07_RS15005 | | ABC transporter ATP-binding protein | low | > 81 |
Ralstonia solanacearum UW163 | 0.44 | UW163_RS07225 | | ABC transporter permease | 0.43 | UW163_RS11360 | | ABC transporter ATP-binding protein | — | — |
Ralstonia solanacearum IBSBF1503 | 0.44 | RALBFv3_RS06400 | | ABC transporter permease | 0.43 | RALBFv3_RS02365 | | ABC transporter ATP-binding protein | low | > 76 |
Ralstonia solanacearum GMI1000 | 0.44 | RS_RS14345 | | ABC transporter permease | 0.43 | RS_RS09520 | | ABC transporter ATP-binding protein | low | > 80 |
Burkholderia phytofirmans PsJN | 0.44 | BPHYT_RS31190 | | ABC transporter permease | 0.42 | BPHYT_RS31205 | | peptide ABC transporter ATP-binding protein | 0.19 | 58 |
Pectobacterium carotovorum WPP14 | 0.43 | HER17_RS00110 | | ABC transporter permease | 0.42 | HER17_RS00240 | | ABC transporter ATP-binding protein | low | > 75 |
Marinobacter adhaerens HP15 | 0.42 | HP15_201 | | peptide transport system permease ABC transporter protein | 0.46 | HP15_204 | | oligopeptide/dipeptide ABC transporter, ATPase subunit | 0.46 | 24 |
Ralstonia sp. UNC404CL21Col | 0.42 | ABZR87_RS14280 | | ABC transporter permease | 0.43 | ABZR87_RS14295 | | oligopeptide/dipeptide ABC transporter ATP-binding protein | low | > 80 |
Dickeya dadantii 3937 | 0.42 | DDA3937_RS08050 | | ABC transporter permease | 0.40 | DDA3937_RS08955 | | ABC transporter ATP-binding protein | low | > 74 |
Dickeya dianthicola ME23 | 0.41 | DZA65_RS08390 | | ABC transporter permease | 0.39 | DZA65_RS10880 | | ABC transporter ATP-binding protein | low | > 75 |
Dickeya dianthicola 67-19 | 0.41 | HGI48_RS07795 | | ABC transporter permease | 0.40 | HGI48_RS09025 | | ABC transporter ATP-binding protein | low | > 71 |
Herbaspirillum seropedicae SmR1 | 0.41 | HSERO_RS07870 | | ABC transporter permease | 0.42 | HSERO_RS07885 | | peptide ABC transporter ATP-binding protein | low | > 78 |
Rahnella sp. WP5 | 0.40 | EX31_RS02580 | | ABC transporter permease | 0.43 | EX31_RS00045 | | ATP-binding cassette domain-containing protein | low | > 89 |
Fusobacterium nucleatum SB010 | 0.37 | HUW76_03520 | | ABC transporter permease | 0.42 | HUW76_03535 | | ATP-binding cassette domain-containing protein | 0.98 | 3 |
Paraburkholderia sabiae LMG 24235 | 0.37 | QEN71_RS28700 | | ABC transporter permease subunit | 0.42 | QEN71_RS28685 | | peptide ABC transporter ATP-binding protein | 0.76 | 2 |
Rhizobium sp. OAE497 | 0.37 | ABIE40_RS20595 | | ABC transporter permease | 0.43 | ABIE40_RS25750 | | oligopeptide/dipeptide ABC transporter ATP-binding protein | low | > 107 |
Paraburkholderia bryophila 376MFSha3.1 | 0.37 | H281DRAFT_05803 | | dipeptide transport system permease protein | 0.42 | H281DRAFT_05806 | | dipeptide transport system ATP-binding protein | 0.53 | 3 |
Pseudomonas fluorescens FW300-N2E2 | 0.37 | Pf6N2E2_3311 | | Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) | 0.45 | Pf6N2E2_3314 | | Dipeptide transport ATP-binding protein DppF (TC 3.A.1.5.2) | 0.84 | 1 |
Azospirillum sp. SherDot2 | 0.37 | MPMX19_04006 | | Glutathione transport system permease protein GsiC | 0.42 | MPMX19_04015 | | Oligopeptide transport ATP-binding protein OppF | low | > 112 |
Pseudomonas sp. RS175 | 0.37 | PFR28_00127 | | Dipeptide transport system permease protein DppB | 0.42 | PFR28_00124 | | Glutathione import ATP-binding protein GsiA | 0.32 | 5 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.37 | Psyr_4239 | | Binding-protein-dependent transport systems inner membrane component | 0.44 | Psyr_4242 | | Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal | 0.58 | 37 |
Pseudomonas fluorescens FW300-N1B4 | 0.37 | Pf1N1B4_1124 | | Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) | 0.45 | Pf1N1B4_1127 | | Dipeptide transport ATP-binding protein DppF (TC 3.A.1.5.2) | low | > 87 |
Pseudomonas fluorescens GW456-L13 | 0.37 | PfGW456L13_5055 | | Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) | 0.45 | PfGW456L13_5058 | | Dipeptide transport ATP-binding protein DppF (TC 3.A.1.5.2) | 0.84 | 2 |
Pseudomonas syringae pv. syringae B728a | 0.37 | Psyr_4239 | | Binding-protein-dependent transport systems inner membrane component | 0.44 | Psyr_4242 | | Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal | 0.51 | 10 |
Pseudomonas fluorescens FW300-N2C3 | 0.37 | AO356_07260 | | peptide ABC transporter permease | 0.45 | AO356_07275 | | peptide ABC transporter ATP-binding protein | 0.90 | 1 |
Pseudomonas fluorescens SBW25 | 0.36 | PFLU_RS04100 | | ABC transporter permease subunit | 0.42 | PFLU_RS04085 | | ABC transporter ATP-binding protein | low | > 109 |
Pseudomonas fluorescens SBW25-INTG | 0.36 | PFLU_RS04100 | | ABC transporter permease subunit | 0.42 | PFLU_RS04085 | | ABC transporter ATP-binding protein | 0.50 | 1 |
Pseudomonas simiae WCS417 | 0.36 | PS417_04060 | | dipeptide ABC transporter, permease component (from data) | 0.42 | PS417_04045 | | peptide ABC transporter ATP-binding protein | — | — |
Rhodospirillum rubrum S1H | 0.36 | Rru_A2357 | | Binding-protein-dependent transport systems inner membrane component (NCBI) | 0.42 | Rru_A0588 | | Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like (NCBI) | low | > 58 |
Pseudomonas fluorescens FW300-N2E3 | 0.36 | AO353_05395 | | peptide ABC transporter permease | 0.45 | AO353_05410 | | peptide ABC transporter ATP-binding protein | 0.72 | 2 |
Pantoea sp. MT58 | 0.36 | IAI47_18645 | | dipeptide ABC transporter permease DppB | 0.42 | IAI47_18630 | | ABC transporter ATP-binding protein | low | > 76 |
Escherichia coli BW25113 | 0.35 | b0831 | yliC | predicted peptide transporter subunit: membrane component of ABC superfamily (NCBI) | 0.43 | b3540 | dppF | dipeptide transporter (NCBI) | low | > 76 |
Escherichia coli ECRC62 | 0.35 | BNILDI_20725 | gsiC | glutathione ABC transporter permease GsiC | 0.43 | BNILDI_03495 | dppF | dipeptide ABC transporter ATP-binding subunit DppF | — | — |
Escherichia coli BL21 | 0.35 | ECD_00798 | | glutathione ABC transporter permease | 0.43 | ECD_03391 | | dipeptide/heme ABC transporter ATPase | low | > 60 |
Escherichia coli ECRC102 | 0.35 | NIAGMN_04135 | gsiC | glutathione ABC transporter permease GsiC | 0.43 | NIAGMN_13880 | dppF | dipeptide ABC transporter ATP-binding subunit DppF | — | — |
Escherichia coli ECRC99 | 0.35 | KEDOAH_21820 | gsiC | glutathione ABC transporter permease GsiC | 0.43 | KEDOAH_12030 | dppF | dipeptide ABC transporter ATP-binding subunit DppF | — | — |
Escherichia coli ECRC101 | 0.35 | OKFHMN_06090 | gsiC | glutathione ABC transporter permease GsiC | 0.43 | OKFHMN_16120 | dppF | dipeptide ABC transporter ATP-binding subunit DppF | — | — |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.35 | OHPLBJKB_02881 | | Glutathione transport system permease protein GsiC | 0.43 | OHPLBJKB_00166 | | Oligopeptide transport ATP-binding protein OppF | low | > 73 |
Escherichia fergusonii Becca | 0.35 | EFB2_03275 | | Glutathione transport system permease protein GsiC | 0.42 | EFB2_00267 | | Oligopeptide transport ATP-binding protein OppF | low | > 86 |
Escherichia coli ECOR27 | 0.35 | NOLOHH_22450 | gsiC | glutathione ABC transporter permease GsiC | 0.43 | NOLOHH_08065 | dppF | dipeptide ABC transporter ATP-binding subunit DppF | low | > 57 |
Escherichia coli ECRC101 | 0.35 | MCAODC_25305 | gsiC | glutathione ABC transporter permease GsiC | 0.43 | MCAODC_06635 | dppF | dipeptide ABC transporter ATP-binding subunit DppF | — | — |
Escherichia coli ECRC98 | 0.35 | JDDGAC_09725 | gsiC | glutathione ABC transporter permease GsiC | 0.43 | JDDGAC_19750 | dppF | dipeptide ABC transporter ATP-binding subunit DppF | — | — |
Escherichia coli Nissle 1917 | 0.35 | ECOLIN_RS04420 | | glutathione ABC transporter permease GsiC | 0.43 | ECOLIN_RS20255 | | dipeptide ABC transporter ATP-binding subunit DppF | low | > 52 |
Pseudomonas sp. S08-1 | 0.35 | OH686_08705 | | Dipeptide ABC transporter, permease protein DppB | 0.44 | OH686_08720 | | Dipeptide ABC transporter, ATP-binding protein DppF | 0.77 | 21 |
Pseudomonas putida KT2440 | 0.35 | PP_0881 | | dipeptide ABC transporter - putative membrane subunit | 0.44 | PP_0878 | | dipeptide ABC transporter, binding subunit | 0.56 | 1 |
Erwinia tracheiphila SCR3 | 0.35 | LU632_RS00270 | dppB | dipeptide ABC transporter permease DppB | 0.41 | LU632_RS00285 | | ABC transporter ATP-binding protein | low | > 74 |
Serratia liquefaciens MT49 | 0.35 | IAI46_00480 | | dipeptide ABC transporter permease DppB | 0.42 | IAI46_00495 | | ABC transporter ATP-binding protein | low | > 86 |
Enterobacter asburiae PDN3 | 0.35 | EX28DRAFT_3803 | | ABC-type dipeptide/oligopeptide/nickel transport systems, permease components | 0.42 | EX28DRAFT_3800 | | oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain | 0.74 | 10 |
Escherichia coli ECOR38 | 0.35 | HEPCGN_01940 | gsiC | glutathione ABC transporter permease GsiC | 0.43 | HEPCGN_14985 | dppF | dipeptide ABC transporter ATP-binding subunit DppF | low | > 85 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.35 | GFF476 | | Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) | 0.42 | GFF479 | | Dipeptide transport ATP-binding protein DppF (TC 3.A.1.5.2) | low | > 78 |
Klebsiella michiganensis M5al | 0.35 | BWI76_RS09105 | | glutathione ABC transporter permease GsiC | 0.43 | BWI76_RS26865 | | dipeptide ABC transporter ATP-binding protein | low | > 92 |
Enterobacter sp. TBS_079 | 0.34 | MPMX20_00191 | | Dipeptide transport system permease protein DppB | 0.43 | MPMX20_00194 | | Vitamin B12 import ATP-binding protein BtuD | 0.38 | 2 |
Rhodopseudomonas palustris CGA009 | 0.34 | TX73_006245 | | ABC transporter permease | 0.38 | TX73_003915 | | ATP-binding cassette domain-containing protein | low | > 86 |
Paraburkholderia graminis OAS925 | 0.33 | ABIE53_003270 | | glutathione transport system permease protein | 0.42 | ABIE53_000054 | | dipeptide transport system ATP-binding protein | low | > 113 |
Not shown: 13 genomes with orthologs for GFF1370 only; 0 genomes with orthologs for GFF1365 only