Conservation of cofitness between GFF2043 and GFF124 in Hydrogenophaga sp. GW460-11-11-14-LB1

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF2043 Glycine/D-amino acid oxidase (deaminating) in putrescine utilization cluster 1.0 GFF124 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) 0.67 16
Variovorax sp. OAS795 0.49 ABID97_RS12365 FAD-binding oxidoreductase 0.18 ABID97_RS11875 NAD-dependent epimerase/dehydratase family protein low > 91
Burkholderia phytofirmans PsJN 0.48 BPHYT_RS23125 FAD-dependent oxidoreductase 0.21 BPHYT_RS23350 NAD-dependent epimerase/dehydratase low > 109
Azospirillum brasilense Sp245 0.42 AZOBR_RS08855 FAD-dependent oxidoreductase 0.56 AZOBR_RS09110 UDP-glucose/glucuronate epimerase — —
Azospirillum sp. SherDot2 0.42 MPMX19_04887 Gamma-glutamylputrescine oxidoreductase 0.57 MPMX19_01802 UDP-N-acetylglucosamine 4-epimerase — —
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_809 Gamma-glutamyl-putrescine oxidase (EC1.4.3.-) 0.21 PfGW456L13_1301 UDP-glucose 4-epimerase (EC 5.1.3.2) — —
Xanthomonas campestris pv. campestris strain 8004 0.41 Xcc-8004.2201.1 glutamine synthetase family protein 0.52 Xcc-8004.4890.1 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) low > 74
Pseudomonas simiae WCS417 0.41 PS417_27720 FAD-dependent oxidoreductase 0.22 PS417_02315 NAD-dependent dehydratase — —
Pseudomonas fluorescens SBW25 0.41 PFLU_RS29395 FAD-binding oxidoreductase 0.22 PFLU_RS02390 NAD-dependent epimerase/dehydratase family protein — —
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS29395 FAD-binding oxidoreductase 0.22 PFLU_RS02390 NAD-dependent epimerase/dehydratase family protein — —
Shewanella amazonensis SB2B 0.40 Sama_2647 oxidoreductase (RefSeq) 0.57 Sama_2235 NAD dependent epimerase/dehydratase family protein (RefSeq) low > 62
Klebsiella michiganensis M5al 0.40 BWI76_RS10690 gamma-glutamylputrescine oxidoreductase 0.64 BWI76_RS18995 NAD-dependent epimerase — —
Pseudomonas syringae pv. syringae B728a 0.40 Psyr_0232 gamma-glutamylputrescine oxidase 0.59 Psyr_5106 NAD-dependent epimerase/dehydratase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.40 Psyr_0232 gamma-glutamylputrescine oxidase 0.59 Psyr_5106 NAD-dependent epimerase/dehydratase low > 86
Serratia liquefaciens MT49 0.40 IAI46_10540 FAD-binding oxidoreductase 0.62 IAI46_14235 NAD-dependent epimerase — —
Enterobacter asburiae PDN3 0.40 EX28DRAFT_1502 Glycine/D-amino acid oxidases (deaminating) 0.62 EX28DRAFT_0531 Nucleoside-diphosphate-sugar epimerases low > 76
Pseudomonas sp. RS175 0.40 PFR28_04402 Gamma-glutamylputrescine oxidoreductase 0.52 PFR28_02769 UDP-N-acetylglucosamine 4-epimerase low > 88
Shewanella sp. ANA-3 0.39 Shewana3_3093 FAD dependent oxidoreductase (RefSeq) 0.62 Shewana3_4089 NAD-dependent epimerase/dehydratase (RefSeq) 0.57 10
Pseudomonas stutzeri RCH2 0.39 Psest_3795 Glycine/D-amino acid oxidases (deaminating) 0.21 Psest_3572 Nucleoside-diphosphate-sugar epimerases — —
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_09170 FAD-dependent oxidoreductase 0.21 AO353_06770 NAD-dependent dehydratase — —
Shewanella oneidensis MR-1 0.39 SO1264 hypothetical oxidoreductase (NCBI ptt file) 0.63 SO4686 NAD dependent epimerase/dehydratase family protein (NCBI ptt file) low > 76
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_4388 Gamma-glutamyl-putrescine oxidase (EC1.4.3.-) 0.60 Pf6N2E2_1139 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) low > 103
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_6047 Nucleoside-diphosphate-sugar epimerases 0.54 Pf1N1B4_5885 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) low > 87
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_12605 FAD-dependent oxidoreductase 0.59 AO356_26320 protein CapI low > 104
Pantoea sp. MT58 0.38 IAI47_07110 FAD-binding oxidoreductase 0.62 IAI47_09040 NAD-dependent epimerase low > 76
Pseudomonas putida KT2440 0.38 PP_3146 putative Oxidoreductase 0.21 PP_0501 NAD-dependent epimerase/dehydratase family protein — —
Pseudomonas sp. S08-1 0.38 OH686_22830 Gamma-glutamyl-putrescine oxidase 0.21 OH686_15630 UDP-glucose 4-epimerase — —
Rahnella sp. WP5 0.37 EX31_RS17910 FAD-binding oxidoreductase 0.61 EX31_RS10090 NAD-dependent epimerase low > 89
Rhodospirillum rubrum S1H 0.37 Rru_A1019 FAD dependent oxidoreductase (NCBI) 0.55 Rru_A3576 UDP-glucuronate 5'-epimerase (NCBI) — —
Agrobacterium fabrum C58 0.37 Atu0194 oxidoreductase 0.49 Atu4148 UDP-glucuronic acid epimerase low > 89
Marinobacter adhaerens HP15 0.34 HP15_944 FAD dependent oxidoreductase 0.63 HP15_2023 UDP-glucuronic acid epimerase — —
Phaeobacter inhibens DSM 17395 0.33 PGA1_c11510 gamma-glutamylputrescine oxidoreductase PuuB 0.51 PGA1_65p00440 UDP-glucuronate 5'-epimerase — —
Sinorhizobium meliloti 1021 0.33 SMc01972 oxidoreductase 0.50 SMc02640 UDP-glucuronic acid epimerase low > 103
Rhizobium sp. OAE497 0.29 ABIE40_RS03205 FAD-binding oxidoreductase 0.49 ABIE40_RS14855 NAD-dependent epimerase low > 107
Lysobacter sp. OAE881 0.28 ABIE51_RS09380 FAD-binding oxidoreductase 0.59 ABIE51_RS07830 NAD-dependent epimerase low > 62
Dyella japonica UNC79MFTsu3.2 0.26 ABZR86_RS05520 FAD-binding oxidoreductase 0.60 ABZR86_RS16185 NAD-dependent epimerase low > 74
Rhodanobacter denitrificans MT42 0.25 LRK55_RS17925 FAD-binding oxidoreductase 0.60 LRK55_RS02985 NAD-dependent epimerase — —
Caulobacter crescentus NA1000 0.25 CCNA_03229 FAD dependent oxidoreductase 0.52 CCNA_02463 UDP-N-acetylglucosamine 4-epimerase — —
Caulobacter crescentus NA1000 Δfur 0.25 CCNA_03229 FAD dependent oxidoreductase 0.52 CCNA_02463 UDP-N-acetylglucosamine 4-epimerase — —
Rhodanobacter sp. FW510-T8 0.25 OKGIIK_07230 FAD-dependent oxidoreductase 0.59 OKGIIK_10115 Capsular biosynthesis protein CpsI — —
Rhodanobacter denitrificans FW104-10B01 0.25 LRK54_RS18070 FAD-binding oxidoreductase 0.60 LRK54_RS03235 NAD-dependent epimerase — —
Acinetobacter radioresistens SK82 0.23 MPMX26_02004 Gamma-glutamylputrescine oxidoreductase 0.19 MPMX26_00051 UDP-N-acetylglucosamine 4-epimerase low > 36
Herbaspirillum seropedicae SmR1 0.21 HSERO_RS01275 FAD-dependent oxidoreductase 0.21 HSERO_RS13735 UDP-glucose 4-epimerase low > 78
Bosea sp. OAE506 0.21 ABIE41_RS08075 FAD-binding oxidoreductase 0.60 ABIE41_RS10525 NAD-dependent epimerase low > 77
Cupriavidus basilensis FW507-4G11 0.20 RR42_RS24610 FAD-dependent oxidoreductase 0.17 RR42_RS15815 NAD-dependent dehydratase — —
Rhodopseudomonas palustris CGA009 0.19 TX73_013660 FAD-dependent oxidoreductase 0.63 TX73_020625 NAD-dependent epimerase low > 86
Alteromonas macleodii MIT1002 0.17 MIT1002_03149 Gamma-glutamylputrescine oxidoreductase 0.61 MIT1002_02835 dTDP-glucose 4,6-dehydratase 2 — —
Dickeya dianthicola 67-19 0.13 HGI48_RS09905 FAD-dependent oxidoreductase 0.60 HGI48_RS06820 NAD-dependent epimerase — —
Dickeya dianthicola ME23 0.13 DZA65_RS10240 FAD-dependent oxidoreductase 0.60 DZA65_RS07160 NAD-dependent epimerase — —
Dickeya dadantii 3937 0.12 DDA3937_RS09900 FAD-dependent oxidoreductase 0.61 DDA3937_RS06785 NAD-dependent epimerase — —
Bacteroides thetaiotaomicron VPI-5482 0.08 BT3734 oxidoreductase (NCBI ptt file) 0.57 BT1342 putative UDP-glucuronic acid epimerase (NCBI ptt file) low > 81
Echinicola vietnamensis KMM 6221, DSM 17526 0.06 Echvi_2816 Glycine/D-amino acid oxidases (deaminating) 0.61 Echvi_2328 Nucleoside-diphosphate-sugar epimerases low > 79

Not shown: 26 genomes with orthologs for GFF2043 only; 14 genomes with orthologs for GFF124 only