| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Variovorax sp. SCN45 | 1.0 | GFF4697 | | TldE protein, part of TldE/TldD proteolytic complex | 1.0 | GFF1002 | | HflK protein | 0.88 | 3 |
| Variovorax sp. OAS795 | 0.96 | ABID97_RS20695 | | metalloprotease PmbA | 0.80 | ABID97_RS14260 | | FtsH protease activity modulator HflK | 0.37 | 81 |
| Acidovorax sp. GW101-3H11 | 0.81 | Ac3H11_3262 | | TldE protein, part of TldE/TldD proteolytic complex | 0.63 | Ac3H11_1801 | | HflK protein | low | > 79 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.75 | GFF3655 | | TldE protein, part of TldE/TldD proteolytic complex | 0.64 | GFF4856 | | HflK protein | low | > 90 |
| Herbaspirillum seropedicae SmR1 | 0.62 | HSERO_RS09265 | | peptidase C69 | 0.44 | HSERO_RS14765 | | membrane protein | low | > 78 |
| Castellaniella sp019104865 MT123 | 0.60 | ABCV34_RS10610 | | metalloprotease PmbA | 0.37 | ABCV34_RS02660 | | FtsH protease activity modulator HflK | — | — |
| Ralstonia solanacearum UW163 | 0.60 | UW163_RS15845 | | metalloprotease PmbA | 0.44 | UW163_RS12775 | | FtsH protease activity modulator HflK | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.60 | RALBFv3_RS13965 | | metalloprotease PmbA | 0.44 | RALBFv3_RS15310 | | FtsH protease activity modulator HflK | low | > 76 |
| Ralstonia solanacearum PSI07 | 0.59 | RPSI07_RS19505 | | metalloprotease PmbA | 0.45 | RPSI07_RS18065 | | FtsH protease activity modulator HflK | low | > 81 |
| Ralstonia sp. UNC404CL21Col | 0.59 | ABZR87_RS09660 | | metalloprotease PmbA | 0.43 | ABZR87_RS10950 | | FtsH protease activity modulator HflK | low | > 80 |
| Paraburkholderia graminis OAS925 | 0.59 | ABIE53_003116 | | PmbA protein | 0.35 | ABIE53_002735 | | membrane protease subunit HflK | 0.38 | 61 |
| Cupriavidus basilensis FW507-4G11 | 0.59 | RR42_RS14750 | | peptidase PMbA | 0.46 | RR42_RS13105 | | membrane protein | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.59 | H281DRAFT_04304 | | microcin-processing peptidase 1. Unknown type peptidase. MEROPS family U62 | 0.36 | H281DRAFT_00523 | | protease FtsH subunit HflK | low | > 103 |
| Paraburkholderia sabiae LMG 24235 | 0.58 | QEN71_RS04270 | | metalloprotease PmbA | 0.38 | QEN71_RS06010 | | FtsH protease activity modulator HflK | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.58 | BPHYT_RS14705 | | peptidase C69 | 0.36 | BPHYT_RS12545 | | membrane protein | — | — |
| Ralstonia solanacearum GMI1000 | 0.57 | RS_RS04700 | | metalloprotease PmbA | 0.42 | RS_RS06120 | | FtsH protease activity modulator HflK | low | > 80 |
| Dechlorosoma suillum PS | 0.51 | Dsui_1234 | | putative Zn-dependent protease-like protein | 0.41 | Dsui_3135 | | HflK protein | — | — |
| Pseudomonas sp. RS175 | 0.46 | PFR28_00163 | | Metalloprotease PmbA | 0.27 | PFR28_05123 | | Modulator of FtsH protease HflK | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.45 | Pf6N2E2_3278 | | TldE protein, part of TldE/TldD proteolytic complex | 0.27 | Pf6N2E2_3612 | | HflK protein | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.45 | AO356_07085 | | peptidase PmbA | 0.28 | AO356_08645 | | hypothetical protein | 0.39 | 11 |
| Pseudomonas fluorescens SBW25 | 0.45 | PFLU_RS04350 | | metalloprotease PmbA | 0.29 | PFLU_RS02580 | | FtsH protease activity modulator HflK | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.45 | PFLU_RS04350 | | metalloprotease PmbA | 0.29 | PFLU_RS02580 | | FtsH protease activity modulator HflK | 0.34 | 42 |
| Rahnella sp. WP5 | 0.45 | EX31_RS12320 | | metalloprotease PmbA | 0.24 | EX31_RS08810 | | FtsH protease activity modulator HflK | low | > 89 |
| Enterobacter asburiae PDN3 | 0.45 | EX28DRAFT_3422 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.23 | EX28DRAFT_3371 | | HflK protein | low | > 76 |
| Escherichia fergusonii Becca | 0.45 | EFB2_04298 | | Metalloprotease PmbA | 0.23 | EFB2_04361 | | Modulator of FtsH protease HflK | low | > 86 |
| Enterobacter sp. TBS_079 | 0.45 | MPMX20_00517 | | Metalloprotease PmbA | 0.22 | MPMX20_00455 | | Modulator of FtsH protease HflK | 0.29 | 24 |
| Escherichia coli ECRC99 | 0.45 | KEDOAH_16230 | pmbA | metalloprotease PmbA | 0.22 | KEDOAH_15910 | hflK | FtsH protease activity modulator HflK | — | — |
| Escherichia coli ECRC98 | 0.45 | JDDGAC_15565 | pmbA | metalloprotease PmbA | 0.22 | JDDGAC_15885 | hflK | FtsH protease activity modulator HflK | low | > 86 |
| Escherichia coli ECRC101 | 0.45 | MCAODC_02430 | pmbA | metalloprotease PmbA | 0.22 | MCAODC_02760 | hflK | FtsH protease activity modulator HflK | low | > 87 |
| Escherichia coli ECOR38 | 0.45 | HEPCGN_10125 | pmbA | metalloprotease PmbA | 0.23 | HEPCGN_10475 | hflK | FtsH protease activity modulator HflK | low | > 87 |
| Escherichia coli BW25113 | 0.45 | b4235 | pmbA | predicted peptidase required for the maturation and secretion of the antibiotic peptide MccB17 (NCBI) | 0.22 | b4174 | hflK | modulator for HflB protease specific for phage lambda cII repressor (NCBI) | 0.26 | 28 |
| Escherichia coli Nissle 1917 | 0.45 | ECOLIN_RS24570 | | metalloprotease PmbA | 0.23 | ECOLIN_RS24240 | | FtsH protease activity modulator HflK | low | > 55 |
| Escherichia coli ECRC100 | 0.45 | OKFHMN_11925 | pmbA | metalloprotease PmbA | 0.22 | OKFHMN_12245 | hflK | FtsH protease activity modulator HflK | low | > 80 |
| Alteromonas macleodii MIT1002 | 0.45 | MIT1002_00230 | | peptidase PmbA | 0.26 | MIT1002_03786 | | Modulator of FtsH protease HflK | low | > 70 |
| Escherichia coli ECOR27 | 0.45 | NOLOHH_04185 | pmbA | metalloprotease PmbA | 0.22 | NOLOHH_04510 | hflK | FtsH protease activity modulator HflK | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.45 | OHPLBJKB_03800 | | Metalloprotease PmbA | 0.22 | OHPLBJKB_03868 | | Modulator of FtsH protease HflK | low | > 73 |
| Escherichia coli ECRC102 | 0.45 | NIAGMN_09775 | pmbA | metalloprotease PmbA | 0.22 | NIAGMN_10095 | hflK | FtsH protease activity modulator HflK | — | — |
| Escherichia coli ECRC62 | 0.45 | BNILDI_07325 | pmbA | metalloprotease PmbA | 0.22 | BNILDI_06980 | hflK | FtsH protease activity modulator HflK | low | > 75 |
| Escherichia coli BL21 | 0.45 | ECD_04103 | | putative antibiotic peptide MccB17 maturation peptidase | 0.22 | ECD_04041 | | modulator for HflB protease specific for phage lambda cII repressor | low | > 61 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.45 | GFF904 | | TldE protein, part of TldE/TldD proteolytic complex | 0.22 | GFF827 | | HflK protein | low | > 78 |
| Pseudomonas putida KT2440 | 0.44 | PP_0942 | | regulatory protease | 0.28 | PP_4892 | | integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex | low | > 96 |
| Pseudomonas simiae WCS417 | 0.44 | PS417_04295 | | peptidase PmbA | 0.27 | PS417_02500 | | membrane protein | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.44 | Pf1N1B4_1090 | | TldE protein, part of TldE/TldD proteolytic complex | 0.28 | Pf1N1B4_1410 | | HflK protein | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.44 | Psyr_4154 | | microcin-processing peptidase 1, Unknown type peptidase, MEROPS family U62 | 0.29 | Psyr_0574 | | protease FtsH subunit HflK | 0.35 | 25 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.44 | Psyr_4154 | | microcin-processing peptidase 1, Unknown type peptidase, MEROPS family U62 | 0.29 | Psyr_0574 | | protease FtsH subunit HflK | low | > 86 |
| Vibrio cholerae E7946 ATCC 55056 | 0.44 | CSW01_12845 | | metalloprotease PmbA | 0.28 | CSW01_01845 | | protease modulator HflK | low | > 62 |
| Pseudomonas sp. S08-1 | 0.44 | OH686_08570 | | TldE protein, part of TldE/TldD proteolytic complex | 0.26 | OH686_09460 | | HflK protein | low | > 80 |
| Pseudomonas fluorescens GW456-L13 | 0.44 | PfGW456L13_5024 | | TldE protein, part of TldE/TldD proteolytic complex | 0.25 | PfGW456L13_152 | | HflK protein | low | > 87 |
| Klebsiella michiganensis M5al | 0.44 | BWI76_RS02850 | | metalloprotease PmbA | 0.22 | BWI76_RS02545 | | protease modulator HflK | low | > 92 |
| Pseudomonas fluorescens FW300-N2E3 | 0.44 | AO353_05205 | | peptidase PmbA | 0.28 | AO353_13155 | | hypothetical protein | low | > 101 |
| Pantoea sp. MT58 | 0.43 | IAI47_02765 | | metalloprotease PmbA | 0.23 | IAI47_02600 | | FtsH protease activity modulator HflK | low | > 76 |
| Dickeya dadantii 3937 | 0.43 | DDA3937_RS01500 | | metalloprotease PmbA | 0.24 | DDA3937_RS18600 | | FtsH protease activity modulator HflK | low | > 74 |
| Shewanella sp. ANA-3 | 0.43 | Shewana3_3631 | | microcin-processing peptidase 1 (RefSeq) | 0.25 | Shewana3_0599 | | HflK protein (RefSeq) | low | > 73 |
| Shewanella amazonensis SB2B | 0.42 | Sama_0482 | | PmbA protein (RefSeq) | 0.23 | Sama_3023 | | hflK protein (RefSeq) | low | > 62 |
| Dickeya dianthicola ME23 | 0.42 | DZA65_RS01480 | | metalloprotease PmbA | 0.24 | DZA65_RS19670 | | FtsH protease activity modulator HflK | low | > 75 |
| Dickeya dianthicola 67-19 | 0.42 | HGI48_RS01415 | | metalloprotease PmbA | 0.24 | HGI48_RS18535 | | FtsH protease activity modulator HflK | low | > 71 |
| Erwinia tracheiphila SCR3 | 0.42 | LU632_RS02145 | pmbA | metalloprotease PmbA | 0.23 | LU632_RS02065 | hflK | FtsH protease activity modulator HflK | low | > 74 |
| Shewanella oneidensis MR-1 | 0.42 | SO4078 | pmbA | pmba protein (NCBI ptt file) | 0.25 | SO0605 | hflK | hflK protein (NCBI ptt file) | low | > 76 |
| Pseudomonas stutzeri RCH2 | 0.42 | Psest_3318 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.27 | Psest_0685 | | HflK protein | — | — |
| Shewanella loihica PV-4 | 0.41 | Shew_0416 | | peptidase U62, modulator of DNA gyrase (RefSeq) | 0.25 | Shew_0568 | | HflK protein (RefSeq) | low | > 60 |
| Azospirillum sp. SherDot2 | 0.30 | MPMX19_01886 | | Metalloprotease PmbA | 0.23 | MPMX19_01251 | | Modulator of FtsH protease HflK | — | — |
| Dinoroseobacter shibae DFL-12 | 0.28 | Dshi_0064 | | peptidase U62 modulator of DNA gyrase (RefSeq) | 0.21 | Dshi_2736 | | HflK protein (RefSeq) | low | > 64 |
Not shown: 25 genomes with orthologs for GFF4697 only; 1 genomes with orthologs for GFF1002 only