| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BL21 | 1.0 | ECD_03274 | | DNA-binding transcriptional repressor | 1.0 | ECD_04047 | | 23S rRNA mG2251 2'-O-ribose methyltransferase, SAM-dependent | 0.52 | 26 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_00281 | | Glycerol-3-phosphate regulon repressor | 1.00 | OHPLBJKB_03862 | | '23S rRNA (guanosine-2'-O-)-methyltransferase RlmB' transl_table=11 | low | > 73 |
| Escherichia coli ECOR38 | 0.99 | HEPCGN_15760 | glpR | DeoR/GlpR family transcriptional regulator | 1.00 | HEPCGN_10445 | rlmB | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 87 |
| Escherichia coli ECRC62 | 0.99 | BNILDI_02780 | glpR | DeoR/GlpR family transcriptional regulator | 1.00 | BNILDI_07010 | rlmB | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 75 |
| Escherichia coli BW25113 | 0.99 | b3423 | glpR | DNA-binding transcriptional repressor (NCBI) | 1.00 | b4180 | rlmB | 23S rRNA (Gm2251)-methyltransferase (NCBI) | low | > 76 |
| Escherichia coli ECOR27 | 0.99 | NOLOHH_08735 | glpR | DeoR/GlpR family transcriptional regulator | 1.00 | NOLOHH_04480 | rlmB | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 75 |
| Escherichia coli ECRC100 | 0.99 | OKFHMN_16940 | glpR | DeoR/GlpR family transcriptional regulator | 1.00 | OKFHMN_12215 | rlmB | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 80 |
| Escherichia coli ECRC101 | 0.99 | MCAODC_07470 | glpR | DeoR/GlpR family transcriptional regulator | 1.00 | MCAODC_02730 | rlmB | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 87 |
| Escherichia coli ECRC99 | 0.99 | KEDOAH_11200 | glpR | DeoR/GlpR family transcriptional regulator | 1.00 | KEDOAH_15940 | rlmB | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | — | — |
| Escherichia coli ECRC102 | 0.99 | NIAGMN_14710 | glpR | DeoR/GlpR family transcriptional regulator | 1.00 | NIAGMN_10065 | rlmB | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | — | — |
| Escherichia coli ECRC98 | 0.99 | JDDGAC_20570 | glpR | DeoR/GlpR family transcriptional regulator | 1.00 | JDDGAC_15855 | rlmB | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 86 |
| Escherichia fergusonii Becca | 0.98 | EFB2_00406 | | Glycerol-3-phosphate regulon repressor | 1.00 | EFB2_04355 | | 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB | low | > 86 |
| Escherichia coli Nissle 1917 | 0.98 | ECOLIN_RS19540 | | DeoR/GlpR family transcriptional regulator | 1.00 | ECOLIN_RS24270 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.93 | GFF590 | | Glycerol-3-phosphate regulon repressor, DeoR family | 0.97 | GFF833 | | '23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)' transl_table=11 | low | > 78 |
| Enterobacter asburiae PDN3 | 0.91 | EX28DRAFT_4123 | | transcriptional regulator, DeoR family | 0.97 | EX28DRAFT_3377 | | rRNA methylase, putative, group 3 | low | > 76 |
| Klebsiella michiganensis M5al | 0.90 | BWI76_RS26175 | | DeoR/GlpR family transcriptional regulator | 0.96 | BWI76_RS02580 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase | low | > 92 |
| Enterobacter sp. TBS_079 | 0.90 | MPMX20_04306 | | Glycerol-3-phosphate regulon repressor | 0.96 | MPMX20_00461 | | 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB | low | > 85 |
| Dickeya dadantii 3937 | 0.81 | DDA3937_RS19670 | | DeoR/GlpR family transcriptional regulator | 0.87 | DDA3937_RS17255 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.81 | HER17_RS01530 | | DeoR/GlpR family transcriptional regulator | 0.84 | HER17_RS03840 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 75 |
| Dickeya dianthicola ME23 | 0.81 | DZA65_RS20890 | | DeoR/GlpR family transcriptional regulator | 0.86 | DZA65_RS18400 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | — | — |
| Dickeya dianthicola 67-19 | 0.81 | HGI48_RS19800 | | DeoR/GlpR family transcriptional regulator | 0.87 | HGI48_RS17310 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | — | — |
| Pantoea sp. MT58 | 0.80 | IAI47_01765 | | DeoR/GlpR family transcriptional regulator | 0.87 | IAI47_02630 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 76 |
| Serratia liquefaciens MT49 | 0.79 | IAI46_23910 | | DeoR/GlpR family transcriptional regulator | 0.87 | IAI46_01665 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 86 |
| Rahnella sp. WP5 | 0.79 | EX31_RS04995 | | DeoR/GlpR family transcriptional regulator | 0.85 | EX31_RS08780 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 89 |
| Erwinia tracheiphila SCR3 | 0.78 | LU632_RS23005 | | DeoR/GlpR family transcriptional regulator | 0.85 | LU632_RS21745 | rlmB | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 74 |
| Vibrio cholerae E7946 ATCC 55056 | 0.65 | CSW01_18830 | | DeoR/GlpR family transcriptional regulator | 0.73 | CSW01_13150 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 62 |
| Pseudomonas sp. RS175 | 0.57 | PFR28_03369 | | Glycerol-3-phosphate regulon repressor | 0.57 | PFR28_05131 | | '23S rRNA (guanosine-2'-O-)-methyltransferase RlmB' transl_table=11 | low | > 88 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.57 | Psyr_3906 | | regulatory protein, DeoR | 0.57 | Psyr_0580 | | 23S rRNA Gm-2251 2'-O-methyltransferase | low | > 86 |
| Pseudomonas fluorescens FW300-N2E2 | 0.57 | Pf6N2E2_5573 | | Glycerol-3-phosphate regulon repressor, DeoR family | 0.57 | Pf6N2E2_3606 | | 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) | low | > 103 |
| Pseudomonas syringae pv. syringae B728a | 0.57 | Psyr_3906 | | regulatory protein, DeoR | 0.57 | Psyr_0580 | | 23S rRNA Gm-2251 2'-O-methyltransferase | low | > 86 |
| Pseudomonas fluorescens FW300-N2C3 | 0.57 | AO356_18245 | | DeoR family transcriptional regulator | 0.57 | AO356_08605 | | 23S rRNA methyltransferase | low | > 104 |
| Pseudomonas fluorescens FW300-N2E3 | 0.56 | AO353_04185 | | DeoR family transcriptional regulator | 0.57 | AO353_13205 | | 23S rRNA methyltransferase | low | > 101 |
| Pseudomonas fluorescens GW456-L13 | 0.56 | PfGW456L13_1733 | | Glycerol-3-phosphate regulon repressor, DeoR family | 0.57 | PfGW456L13_143 | | 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.56 | Pf1N1B4_768 | | Glycerol-3-phosphate regulon repressor, DeoR family | 0.57 | Pf1N1B4_1402 | | 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) | — | — |
| Pseudomonas simiae WCS417 | 0.56 | PS417_05570 | | DeoR faimly transcriptional regulator | 0.56 | PS417_02560 | | 23S rRNA methyltransferase | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.56 | PFLU_RS05655 | | DeoR/GlpR family transcriptional regulator | 0.56 | PFLU_RS02630 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.56 | PFLU_RS05655 | | DeoR/GlpR family transcriptional regulator | 0.56 | PFLU_RS02630 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 109 |
| Pseudomonas putida KT2440 | 0.56 | PP_1074 | | DNA-binding transcriptional repressor - GlpR-glycerol-3-phosphate | 0.56 | PP_4879 | | 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB | low | > 96 |
| Pseudomonas stutzeri RCH2 | 0.54 | Psest_2774 | | Transcriptional regulators of sugar metabolism | 0.57 | Psest_0692 | | rRNA methylase, putative, group 3 | — | — |
| Pseudomonas sp. S08-1 | 0.54 | OH686_20365 | | Glycerol-3-phosphate regulon repressor GlpR | 0.60 | OH686_15915 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase | low | > 80 |
| Alteromonas macleodii MIT1002 | 0.52 | MIT1002_00199 | | Glycerol-3-phosphate regulon repressor | 0.65 | MIT1002_03605 | | 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB | low | > 70 |
| Marinobacter adhaerens HP15 | 0.52 | HP15_2167 | | transcriptional repressor for the dissimilation of sn-glycerol 3-phosphate, DeoR family protein | 0.64 | HP15_623 | | RNA methyltransferase, TrmH family, group 3 | low | > 73 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.50 | Xcc-8004.472.1 | | Glycerol-3-phosphate regulon repressor, DeoR family | 0.46 | Xcc-8004.3368.1 | | 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) | low | > 74 |
| Paraburkholderia sabiae LMG 24235 | 0.47 | QEN71_RS02250 | | DeoR/GlpR family DNA-binding transcription regulator | 0.52 | QEN71_RS22920 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.46 | BPHYT_RS16470 | | DeoR faimly transcriptional regulator | 0.52 | BPHYT_RS08460 | | 23S rRNA (guanosine-2'-O-)-methyltransferase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.46 | H281DRAFT_04225 | | transcriptional regulator, DeoR family | 0.51 | H281DRAFT_00713 | | 23S rRNA Gm-2251 2'-O-methyltransferase | low | > 103 |
| Azospirillum sp. SherDot2 | 0.46 | MPMX19_05965 | | Glycerol-3-phosphate regulon repressor | 0.31 | MPMX19_00374 | | 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB | — | — |
| Variovorax sp. SCN45 | 0.46 | GFF2678 | | Glycerol-3-phosphate regulon repressor GlpR | 0.49 | GFF1018 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase (EC 2.1.1.185) | low | > 127 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.45 | GFF2808 | | Glycerol-3-phosphate regulon repressor, DeoR family | 0.48 | GFF4838 | | 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) | — | — |
| Paraburkholderia graminis OAS925 | 0.45 | ABIE53_003465 | | DeoR family glycerol-3-phosphate regulon repressor | 0.51 | ABIE53_001941 | | 23S rRNA (guanosine2251-2'-O)-methyltransferase | low | > 113 |
| Ralstonia solanacearum PSI07 | 0.45 | RPSI07_RS09890 | | DeoR/GlpR transcriptional regulator | 0.52 | RPSI07_RS18025 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 81 |
| Cupriavidus basilensis FW507-4G11 | 0.45 | RR42_RS13795 | | DeoR family transcriptional regulator | 0.49 | RR42_RS13060 | | 23S rRNA methyltransferase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.45 | RALBFv3_RS07355 | | DeoR/GlpR transcriptional regulator | 0.53 | RALBFv3_RS15350 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | — | — |
| Ralstonia solanacearum UW163 | 0.45 | UW163_RS06265 | | DeoR/GlpR transcriptional regulator | 0.53 | UW163_RS12815 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | — | — |
| Ralstonia solanacearum GMI1000 | 0.45 | RS_RS15295 | | DeoR/GlpR transcriptional regulator | 0.52 | RS_RS06160 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 80 |
| Dinoroseobacter shibae DFL-12 | 0.44 | Dshi_0631 | | transcriptional regulator, DeoR family (RefSeq) | 0.23 | Dshi_2571 | | RNA methyltransferase, TrmH family, group 3 (RefSeq) | low | > 64 |
| Ralstonia sp. UNC404CL21Col | 0.44 | ABZR87_RS03015 | | DeoR/GlpR family DNA-binding transcription regulator | 0.52 | ABZR87_RS10990 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 80 |
| Variovorax sp. OAS795 | 0.44 | ABID97_RS19960 | | DeoR/GlpR family DNA-binding transcription regulator | 0.49 | ABID97_RS14320 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | — | — |
| Herbaspirillum seropedicae SmR1 | 0.43 | HSERO_RS04835 | | DeoR faimly transcriptional regulator | 0.50 | HSERO_RS09295 | | 23S rRNA (guanosine-2'-O-)-methyltransferase | — | — |
| Azospirillum brasilense Sp245 | 0.43 | AZOBR_RS25600 | | DeoR faimly transcriptional regulator | 0.33 | AZOBR_RS11565 | | ribosomal large subunit pseudouridine synthase | — | — |
| Rhodopseudomonas palustris CGA009 | 0.41 | TX73_022865 | | DeoR/GlpR family DNA-binding transcription regulator | 0.25 | TX73_017390 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 86 |
| Phaeobacter inhibens DSM 17395 | 0.32 | PGA1_c08250 | | putative glycerol-3-phosphate regulon repressor glpR | 0.24 | PGA1_c09200 | | putative 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB | low | > 62 |
| Rhodanobacter denitrificans MT42 | 0.25 | LRK55_RS01610 | | DeoR/GlpR family DNA-binding transcription regulator | 0.45 | LRK55_RS00230 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.25 | LRK54_RS01820 | | DeoR/GlpR family DNA-binding transcription regulator | 0.45 | LRK54_RS00490 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 59 |
| Fusobacterium nucleatum SB010 | 0.23 | HUW76_01930 | | DeoR/GlpR transcriptional regulator | 0.28 | HUW76_09335 | | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | low | > 35 |
Not shown: 3 genomes with orthologs for ECD_03274 only; 27 genomes with orthologs for ECD_04047 only