Conservation of cofitness between ECD_03941 and ECD_03283 in Escherichia coli BL21

66 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03941 acetyl-CoA synthetase 1.0 ECD_03283 glycogen debranching enzyme low > 61
Escherichia coli BW25113 1.00 b4069 acs acetyl-coenzyme A synthetase (NCBI) 1.00 b3431 glgX glycogen debranching enzyme (NCBI) low > 76
Escherichia coli ECRC62 1.00 BNILDI_06445 acs acetate--CoA ligase 0.99 BNILDI_02835 glgX glycogen debranching protein GlgX low > 75
Escherichia coli ECOR27 1.00 NOLOHH_05080 acs acetate--CoA ligase 0.99 NOLOHH_08680 glgX glycogen debranching protein GlgX low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03971 Acetyl-coenzyme A synthetase 1.00 OHPLBJKB_00270 Glycogen debranching enzyme low > 73
Escherichia coli ECOR38 1.00 HEPCGN_11455 acs acetate--CoA ligase 1.00 HEPCGN_15705 glgX glycogen debranching protein GlgX low > 87
Escherichia coli ECRC101 0.99 MCAODC_03340 acs acetate--CoA ligase 1.00 MCAODC_07420 glgX glycogen debranching protein GlgX low > 87
Escherichia coli ECRC102 0.99 NIAGMN_10675 acs acetate--CoA ligase 1.00 NIAGMN_14660 glgX glycogen debranching protein GlgX — —
Escherichia coli ECRC98 0.99 JDDGAC_16465 acs acetate--CoA ligase 1.00 JDDGAC_20520 glgX glycogen debranching protein GlgX low > 86
Escherichia coli ECRC100 0.99 OKFHMN_12830 acs acetate--CoA ligase 1.00 OKFHMN_16890 glgX glycogen debranching protein GlgX low > 80
Escherichia coli ECRC99 0.99 KEDOAH_15320 acs acetate--CoA ligase 1.00 KEDOAH_11250 glgX glycogen debranching protein GlgX — —
Escherichia fergusonii Becca 0.99 EFB2_04520 Acetyl-coenzyme A synthetase 0.99 EFB2_00388 Glycogen debranching enzyme low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS23550 acetate--CoA ligase 0.99 ECOLIN_RS19635 glycogen debranching protein GlgX low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.96 GFF1452 Acetyl-coenzyme A synthetase (EC 6.2.1.1) 0.87 GFF576 Glycogen debranching enzyme (EC 3.2.1.-) low > 78
Enterobacter asburiae PDN3 0.95 EX28DRAFT_4232 acetate--CoA ligase 0.81 EX28DRAFT_4116 glycogen debranching enzyme GlgX 0.60 51
Enterobacter sp. TBS_079 0.94 MPMX20_00291 Acetyl-coenzyme A synthetase 0.81 MPMX20_04313 Glycogen debranching enzyme low > 85
Klebsiella michiganensis M5al 0.94 BWI76_RS02095 acetyl-coenzyme A synthetase 0.79 BWI76_RS26210 glycogen debranching enzyme low > 92
Pantoea sp. MT58 0.87 IAI47_17715 acetate--CoA ligase 0.69 IAI47_01685 glycogen debranching protein GlgX low > 76
Rahnella sp. WP5 0.87 EX31_RS09040 acetate--CoA ligase 0.59 EX31_RS05020 glycogen debranching protein GlgX low > 89
Pectobacterium carotovorum WPP14 0.86 HER17_RS17630 acetate--CoA ligase 0.64 HER17_RS01490 glycogen debranching protein GlgX low > 75
Serratia liquefaciens MT49 0.86 IAI46_01405 acetate--CoA ligase 0.61 IAI46_23935 glycogen debranching protein GlgX low > 86
Dickeya dadantii 3937 0.85 DDA3937_RS03480 acetate--CoA ligase 0.61 DDA3937_RS19740 glycogen debranching protein GlgX low > 74
Dickeya dianthicola 67-19 0.85 HGI48_RS03580 acetate--CoA ligase 0.61 HGI48_RS19850 glycogen debranching protein GlgX low > 71
Dickeya dianthicola ME23 0.85 DZA65_RS03695 acetate--CoA ligase 0.60 DZA65_RS20925 glycogen debranching protein GlgX low > 75
Vibrio cholerae E7946 ATCC 55056 0.77 CSW01_01520 acetyl-coenzyme A synthetase 0.30 CSW01_19235 glycogen debranching enzyme GlgX low > 62
Shewanella sp. ANA-3 0.73 Shewana3_2523 acetyl-CoA synthetase (RefSeq) 0.39 Shewana3_2933 glycogen debranching enzyme GlgX (RefSeq) low > 73
Shewanella oneidensis MR-1 0.72 SO2743 acs acetyl-coenzyme A synthetase (NCBI ptt file) 0.39 SO1495 glgX glycogen operon protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.71 Sama_2079 acetyl-CoA synthetase (RefSeq) 0.37 Sama_2452 glycogen operon protein (RefSeq) low > 62
Pseudomonas putida KT2440 0.71 PP_4487 acetyl-CoA synthetase 0.42 PP_4055 Glycogen debranching enzyme low > 96
Pseudomonas sp. RS175 0.71 PFR28_03289 Acetyl-coenzyme A synthetase 0.41 PFR28_02150 Glycogen operon protein GlgX low > 88
Pseudomonas sp. S08-1 0.71 OH686_21250 acetate--CoA ligase 0.44 OH686_01305 glycogen debranching enzyme GlgX low > 80
Pseudomonas fluorescens FW300-N2E2 0.71 Pf6N2E2_5659 Acetyl-coenzyme A synthetase (EC 6.2.1.1) 0.41 Pf6N2E2_1073 Glycogen debranching enzyme (EC 3.2.1.-) low > 103
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_18695 Acetyl-coenzyme A synthetase (EC 6.2.1.1) (from data) 0.41 AO356_26000 glycogen debranching protein low > 104
Pseudomonas simiae WCS417 0.70 PS417_21750 acetyl-CoA synthetase 0.41 PS417_14505 glycogen debranching protein low > 88
Pseudomonas fluorescens SBW25-INTG 0.70 PFLU_RS23355 acetate--CoA ligase 0.41 PFLU_RS16435 glycogen debranching protein GlgX low > 109
Pseudomonas fluorescens SBW25 0.70 PFLU_RS23355 acetate--CoA ligase 0.41 PFLU_RS16435 glycogen debranching protein GlgX low > 109
Pseudomonas syringae pv. syringae B728a 0.70 Psyr_3572 acetyl-coenzyme A synthetase 0.42 Psyr_2997 Glycoside hydrolase, family 13, N-terminal:Alpha amylase, catalytic region low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.70 Psyr_3572 acetyl-coenzyme A synthetase 0.42 Psyr_2997 Glycoside hydrolase, family 13, N-terminal:Alpha amylase, catalytic region low > 86
Pseudomonas fluorescens FW300-N1B4 0.70 Pf1N1B4_3430 Acetyl-coenzyme A synthetase (EC 6.2.1.1) 0.42 Pf1N1B4_4682 Glycogen debranching enzyme (EC 3.2.1.-) low > 87
Shewanella loihica PV-4 0.70 Shew_1533 acetyl-CoA synthetase (RefSeq) 0.42 Shew_1169 glycogen debranching enzyme GlgX (RefSeq) low > 60
Pseudomonas fluorescens GW456-L13 0.70 PfGW456L13_1963 Acetyl-coenzyme A synthetase (EC 6.2.1.1) 0.41 PfGW456L13_3250 Glycogen debranching enzyme (EC 3.2.1.-) low > 87
Pseudomonas fluorescens FW300-N2E3 0.70 AO353_03060 Acetyl-coenzyme A synthetase (EC 6.2.1.1) (from data) 0.41 AO353_23750 glycogen debranching protein low > 101
Magnetospirillum magneticum AMB-1 0.69 AMB_RS21140 acetate--CoA ligase 0.40 AMB_RS15425 glycogen debranching enzyme GlgX low > 64
Azospirillum brasilense Sp245 0.67 AZOBR_RS00270 acetyl-CoA synthetase 0.44 AZOBR_RS09470 glycogen debranching protein 0.25 65
Rhodopseudomonas palustris CGA009 0.67 TX73_001095 acetate--CoA ligase 0.40 TX73_018890 glycogen debranching protein GlgX low > 86
Bosea sp. OAE506 0.67 ABIE41_RS05675 acetate--CoA ligase 0.39 ABIE41_RS13065 glycogen debranching protein GlgX low > 77
Alteromonas macleodii MIT1002 0.67 MIT1002_03516 Acetyl-coenzyme A synthetase 0.31 MIT1002_02398 Glycogen debranching enzyme low > 70
Azospirillum sp. SherDot2 0.65 MPMX19_02038 Acetyl-coenzyme A synthetase 0.44 MPMX19_03850 Glycogen operon protein GlgX low > 112
Pseudomonas stutzeri RCH2 0.64 Psest_2657 acetate--CoA ligase 0.43 Psest_2167 glycogen debranching enzyme GlgX low > 67
Rhizobium sp. OAE497 0.64 ABIE40_RS19160 acetate--CoA ligase 0.40 ABIE40_RS30515 glycogen debranching protein GlgX low > 107
Sinorhizobium meliloti 1021 0.64 SMc04093 acetyl-CoA synthetase 0.40 SM_b21446 glycosyl hydrolase low > 103
Agrobacterium fabrum C58 0.64 Atu2745 acetyl-coenzyme A synthetase 0.35 Atu4073 glycogen debranching protein low > 89
Xanthomonas campestris pv. campestris strain 8004 0.63 Xcc-8004.5157.1 Acetyl-coenzyme A synthetase (EC 6.2.1.1) 0.46 Xcc-8004.1331.1 Glycogen debranching enzyme (EC 3.2.1.-) 0.36 25
Synechococcus elongatus PCC 7942 0.52 Synpcc7942_1352 acsA acetyl-CoA synthetase 0.32 Synpcc7942_0086 glgX isoamylase. Glycosyl Hydrolase family 13. low > 38
Mucilaginibacter yixingensis YX-36 DSM 26809 0.52 ABZR88_RS15400 acetate--CoA ligase 0.42 ABZR88_RS11805 glycogen debranching protein GlgX low > 71
Paraburkholderia sabiae LMG 24235 0.48 QEN71_RS23765 acetate--CoA ligase 0.42 QEN71_RS10560 glycogen debranching protein GlgX low > 153
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS07770 acetyl-CoA synthetase 0.40 HSERO_RS12505 glycogen debranching protein low > 78
Burkholderia phytofirmans PsJN 0.47 BPHYT_RS07000 acetyl-CoA synthetase 0.41 BPHYT_RS33785 glycogen debranching protein low > 109
Ralstonia solanacearum GMI1000 0.47 RS_RS09815 acetyl-coenzyme A synthetase 0.42 RS_RS18300 glycogen debranching enzyme GlgX low > 80
Paraburkholderia graminis OAS925 0.47 ABIE53_001664 acetyl-CoA synthetase 0.41 ABIE53_005979 isoamylase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_04953 acetyl-coenzyme A synthetase 0.42 H281DRAFT_02812 glycogen operon protein low > 103
Ralstonia solanacearum PSI07 0.47 RPSI07_RS14880 acetate--CoA ligase 0.41 RPSI07_RS00880 glycogen debranching enzyme GlgX low > 81
Variovorax sp. OAS795 0.47 ABID97_RS27430 acetate--CoA ligase 0.41 ABID97_RS04545 glycogen debranching protein GlgX low > 91
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS02445 acetate--CoA ligase 0.40 RALBFv3_RS22310 glycogen debranching enzyme GlgX 0.44 40
Ralstonia solanacearum UW163 0.47 UW163_RS11280 acetate--CoA ligase 0.40 UW163_RS22855 glycogen debranching enzyme GlgX — —
Variovorax sp. SCN45 0.46 GFF475 Acetyl-CoA synthetase (EC 6.2.1.1) 0.42 GFF7304 Limit dextrin alpha-1,6-maltotetraose-hydrolase (EC 3.2.1.196) low > 127
Mycobacterium tuberculosis H37Rv 0.45 Rv3667 Acetyl-coenzyme A synthetase Acs (acetate--CoA ligase) (acetyl-CoA synthetase) (acetyl-CoA synthase) (acyl-activating enzyme) (acetate thiokinase) (acetyl-activating enzyme) (acetate--coenzyme A ligase) (acetyl-coenzyme A synthase) 0.41 Rv1564c Probable maltooligosyltrehalose synthase TreX low > 58

Not shown: 33 genomes with orthologs for ECD_03941 only; 3 genomes with orthologs for ECD_03283 only