Conservation of cofitness between ECD_03274 and ECD_03241 in Escherichia coli BL21

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03274 DNA-binding transcriptional repressor 1.0 ECD_03241 3-dehydroquinate synthase 0.55 16
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00281 Glycerol-3-phosphate regulon repressor 1.00 OHPLBJKB_00314 3-dehydroquinate synthase low > 73
Escherichia coli ECOR38 0.99 HEPCGN_15760 glpR DeoR/GlpR family transcriptional regulator 1.00 HEPCGN_15935 aroB 3-dehydroquinate synthase low > 87
Escherichia coli BW25113 0.99 b3423 glpR DNA-binding transcriptional repressor (NCBI) 1.00 b3389 aroB 3-dehydroquinate synthase (NCBI) low > 76
Escherichia coli ECOR27 0.99 NOLOHH_08735 glpR DeoR/GlpR family transcriptional regulator 1.00 NOLOHH_08905 aroB 3-dehydroquinate synthase low > 75
Escherichia coli ECRC62 0.99 BNILDI_02780 glpR DeoR/GlpR family transcriptional regulator 1.00 BNILDI_02615 aroB 3-dehydroquinate synthase low > 75
Escherichia coli ECRC101 0.99 MCAODC_07470 glpR DeoR/GlpR family transcriptional regulator 0.99 MCAODC_07645 aroB 3-dehydroquinate synthase 0.61 53
Escherichia coli ECRC100 0.99 OKFHMN_16940 glpR DeoR/GlpR family transcriptional regulator 0.99 OKFHMN_17115 aroB 3-dehydroquinate synthase low > 80
Escherichia coli ECRC102 0.99 NIAGMN_14710 glpR DeoR/GlpR family transcriptional regulator 0.99 NIAGMN_14885 aroB 3-dehydroquinate synthase
Escherichia coli ECRC99 0.99 KEDOAH_11200 glpR DeoR/GlpR family transcriptional regulator 0.99 KEDOAH_11025 aroB 3-dehydroquinate synthase
Escherichia coli ECRC98 0.99 JDDGAC_20570 glpR DeoR/GlpR family transcriptional regulator 0.99 JDDGAC_20745 aroB 3-dehydroquinate synthase low > 86
Escherichia coli Nissle 1917 0.98 ECOLIN_RS19540 DeoR/GlpR family transcriptional regulator 0.99 ECOLIN_RS19360 3-dehydroquinate synthase
Escherichia fergusonii Becca 0.98 EFB2_00406 Glycerol-3-phosphate regulon repressor 1.00 EFB2_00439 3-dehydroquinate synthase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF590 Glycerol-3-phosphate regulon repressor, DeoR family 0.86 GFF630 3-dehydroquinate synthase (EC 4.2.3.4) 0.78 9
Enterobacter asburiae PDN3 0.91 EX28DRAFT_4123 transcriptional regulator, DeoR family 0.88 EX28DRAFT_4153 3-dehydroquinate synthase (EC 4.2.3.4) low > 76
Klebsiella michiganensis M5al 0.90 BWI76_RS26175 DeoR/GlpR family transcriptional regulator 0.85 BWI76_RS26085 3-dehydroquinate synthase low > 92
Enterobacter sp. TBS_079 0.90 MPMX20_04306 Glycerol-3-phosphate regulon repressor 0.89 MPMX20_04278 3-dehydroquinate synthase low > 85
Dickeya dadantii 3937 0.81 DDA3937_RS19670 DeoR/GlpR family transcriptional regulator 0.81 DDA3937_RS19545 3-dehydroquinate synthase
Pectobacterium carotovorum WPP14 0.81 HER17_RS01530 DeoR/GlpR family transcriptional regulator 0.79 HER17_RS01780 3-dehydroquinate synthase low > 75
Dickeya dianthicola 67-19 0.81 HGI48_RS19800 DeoR/GlpR family transcriptional regulator 0.80 HGI48_RS19675 3-dehydroquinate synthase
Dickeya dianthicola ME23 0.81 DZA65_RS20890 DeoR/GlpR family transcriptional regulator 0.80 DZA65_RS20760 3-dehydroquinate synthase
Pantoea sp. MT58 0.80 IAI47_01765 DeoR/GlpR family transcriptional regulator 0.84 IAI47_01895 3-dehydroquinate synthase
Serratia liquefaciens MT49 0.79 IAI46_23910 DeoR/GlpR family transcriptional regulator 0.81 IAI46_23700 3-dehydroquinate synthase low > 86
Rahnella sp. WP5 0.79 EX31_RS04995 DeoR/GlpR family transcriptional regulator 0.84 EX31_RS04720 3-dehydroquinate synthase
Erwinia tracheiphila SCR3 0.78 LU632_RS23005 DeoR/GlpR family transcriptional regulator 0.82 LU632_RS22865 aroB 3-dehydroquinate synthase low > 74
Vibrio cholerae E7946 ATCC 55056 0.65 CSW01_18830 DeoR/GlpR family transcriptional regulator 0.63 CSW01_13300 3-dehydroquinate synthase low > 62
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_5573 Glycerol-3-phosphate regulon repressor, DeoR family 0.55 Pf6N2E2_3754 3-dehydroquinate synthase (EC 4.2.3.4)
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_3906 regulatory protein, DeoR 0.54 Psyr_0409 3-dehydroquinate synthase
Pseudomonas sp. RS175 0.57 PFR28_03369 Glycerol-3-phosphate regulon repressor 0.54 PFR28_05013 3-dehydroquinate synthase
Pseudomonas fluorescens FW300-N2C3 0.57 AO356_18245 DeoR family transcriptional regulator 0.55 AO356_09385 3-dehydroquinate synthase
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_3906 regulatory protein, DeoR 0.54 Psyr_0409 3-dehydroquinate synthase
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_04185 DeoR family transcriptional regulator 0.54 AO353_12505 3-dehydroquinate synthase
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_768 Glycerol-3-phosphate regulon repressor, DeoR family 0.55 Pf1N1B4_1537 3-dehydroquinate synthase (EC 4.2.3.4)
Pseudomonas simiae WCS417 0.56 PS417_05570 DeoR faimly transcriptional regulator 0.55 PS417_01985 3-dehydroquinate synthase
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_1733 Glycerol-3-phosphate regulon repressor, DeoR family 0.55 PfGW456L13_275 3-dehydroquinate synthase (EC 4.2.3.4) low > 87
Pseudomonas putida KT2440 0.56 PP_1074 DNA-binding transcriptional repressor - GlpR-glycerol-3-phosphate 0.55 PP_5078 3-dehydroquinate synthase
Pseudomonas fluorescens SBW25-INTG 0.56 PFLU_RS05655 DeoR/GlpR family transcriptional regulator 0.55 PFLU_RS02030 3-dehydroquinate synthase
Pseudomonas fluorescens SBW25 0.56 PFLU_RS05655 DeoR/GlpR family transcriptional regulator 0.55 PFLU_RS02030 3-dehydroquinate synthase
Pseudomonas stutzeri RCH2 0.54 Psest_2774 Transcriptional regulators of sugar metabolism 0.53 Psest_3713 3-dehydroquinate synthase
Pseudomonas sp. S08-1 0.54 OH686_20365 Glycerol-3-phosphate regulon repressor GlpR 0.54 OH686_10015 3-dehydroquinate synthase
Alteromonas macleodii MIT1002 0.52 MIT1002_00199 Glycerol-3-phosphate regulon repressor 0.60 MIT1002_00447 3-dehydroquinate synthase
Marinobacter adhaerens HP15 0.52 HP15_2167 transcriptional repressor for the dissimilation of sn-glycerol 3-phosphate, DeoR family protein 0.53 HP15_480 3-dehydroquinate synthase
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.472.1 Glycerol-3-phosphate regulon repressor, DeoR family 0.41 Xcc-8004.1615.1 3-dehydroquinate synthase (EC 4.2.3.4) low > 74
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS02250 DeoR/GlpR family DNA-binding transcription regulator 0.51 QEN71_RS28035 3-dehydroquinate synthase 0.49 40
Sinorhizobium meliloti 1021 0.47 SMc02521 glycerol-3-phosphate regulon repressor transcription regulator protein 0.38 SMc00696 3-dehydroquinate synthase
Burkholderia phytofirmans PsJN 0.46 BPHYT_RS16470 DeoR faimly transcriptional regulator 0.52 BPHYT_RS17885 3-dehydroquinate synthase low > 109
Azospirillum sp. SherDot2 0.46 MPMX19_05965 Glycerol-3-phosphate regulon repressor 0.38 MPMX19_02639 3-dehydroquinate synthase
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_04225 transcriptional regulator, DeoR family 0.51 H281DRAFT_05615 3-dehydroquinate synthase
Agrobacterium fabrum C58 0.46 Atu3898 DeoR family transcriptional regulator 0.38 Atu3625 3-dehydroquinate synthase
Variovorax sp. SCN45 0.46 GFF2678 Glycerol-3-phosphate regulon repressor GlpR 0.50 GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.45 GFF2808 Glycerol-3-phosphate regulon repressor, DeoR family 0.51 GFF1331 3-dehydroquinate synthase (EC 4.2.3.4)
Ralstonia solanacearum PSI07 0.45 RPSI07_RS09890 DeoR/GlpR transcriptional regulator 0.51 RPSI07_RS10300 3-dehydroquinate synthase
Paraburkholderia graminis OAS925 0.45 ABIE53_003465 DeoR family glycerol-3-phosphate regulon repressor 0.52 ABIE53_003740 3-dehydroquinate synthase
Cupriavidus basilensis FW507-4G11 0.45 RR42_RS13795 DeoR family transcriptional regulator 0.52 RR42_RS19005 3-dehydroquinate synthase
Ralstonia solanacearum GMI1000 0.45 RS_RS15295 DeoR/GlpR transcriptional regulator 0.51 RS_RS14880 3-dehydroquinate synthase
Ralstonia solanacearum UW163 0.45 UW163_RS06265 DeoR/GlpR transcriptional regulator 0.50 UW163_RS06680 3-dehydroquinate synthase
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS07355 DeoR/GlpR transcriptional regulator 0.50 RALBFv3_RS06935 3-dehydroquinate synthase
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS03015 DeoR/GlpR family DNA-binding transcription regulator 0.50 ABZR87_RS02590 3-dehydroquinate synthase low > 80
Variovorax sp. OAS795 0.44 ABID97_RS19960 DeoR/GlpR family DNA-binding transcription regulator 0.53 ABID97_RS23255 3-dehydroquinate synthase
Dinoroseobacter shibae DFL-12 0.44 Dshi_0631 transcriptional regulator, DeoR family (RefSeq) 0.36 Dshi_1608 3-dehydroquinate synthase (RefSeq)
Rhizobium sp. OAE497 0.43 ABIE40_RS17880 DeoR/GlpR family DNA-binding transcription regulator 0.38 ABIE40_RS17670 3-dehydroquinate synthase
Azospirillum brasilense Sp245 0.43 AZOBR_RS25600 DeoR faimly transcriptional regulator 0.38 AZOBR_RS03220 3-dehydroquinate synthase
Rhodopseudomonas palustris CGA009 0.41 TX73_022865 DeoR/GlpR family DNA-binding transcription regulator 0.37 TX73_002610 3-dehydroquinate synthase
Phaeobacter inhibens DSM 17395 0.32 PGA1_c08250 putative glycerol-3-phosphate regulon repressor glpR 0.38 PGA1_c14100 3-dehydroquinate synthase AroB
Rhodanobacter denitrificans MT42 0.25 LRK55_RS01610 DeoR/GlpR family DNA-binding transcription regulator 0.41 LRK55_RS04085 3-dehydroquinate synthase
Rhodanobacter denitrificans FW104-10B01 0.25 LRK54_RS01820 DeoR/GlpR family DNA-binding transcription regulator 0.41 LRK54_RS04310 3-dehydroquinate synthase

Not shown: 2 genomes with orthologs for ECD_03274 only; 24 genomes with orthologs for ECD_03241 only