Conservation of cofitness between ECD_00741 and ECD_02836 in Escherichia coli BL21

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00741 7,8-diaminopelargonic acid synthase, PLP-dependent 1.0 ECD_02836 putative type II secretion protein GspF 0.53 16
Escherichia coli ECRC102 0.99 NIAGMN_04450 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.52 NIAGMN_28595 gspF type II secretion system inner membrane protein GspF — —
Escherichia coli ECRC101 0.99 OKFHMN_06405 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.52 OKFHMN_00275 gspF type II secretion system inner membrane protein GspF — —
Escherichia coli ECRC101 0.99 MCAODC_25620 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.52 MCAODC_15275 gspF type II secretion system inner membrane protein GspF — —
Escherichia coli ECOR27 0.99 NOLOHH_22775 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.99 NOLOHH_10985 gspF general secretion pathway protein F low > 57
Escherichia coli ECRC98 0.99 JDDGAC_10040 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.52 JDDGAC_30305 gspF type II secretion system inner membrane protein GspF — —
Escherichia coli ECOR38 0.99 HEPCGN_01635 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.99 HEPCGN_18060 gspF general secretion pathway protein F low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_02939 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.98 OHPLBJKB_00741 Type II secretion system protein F low > 73
Escherichia fergusonii Becca 0.99 EFB2_03331 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 1.00 EFB2_00847 Type II secretion system protein F low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS04125 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.99 ECOLIN_RS17075 type II secretion system inner membrane protein GspF low > 52
Klebsiella michiganensis M5al 0.87 BWI76_RS08755 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.53 BWI76_RS05080 type II secretion protein F low > 92
Dickeya dadantii 3937 0.76 DDA3937_RS08505 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.53 DDA3937_RS14790 type II secretion system inner membrane protein GspF low > 74
Dickeya dianthicola 67-19 0.75 HGI48_RS08670 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.53 HGI48_RS14725 type II secretion system inner membrane protein GspF low > 71
Dickeya dianthicola ME23 0.75 DZA65_RS08960 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.53 DZA65_RS15670 type II secretion system inner membrane protein GspF low > 75
Pectobacterium carotovorum WPP14 0.74 HER17_RS13465 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.51 HER17_RS06695 type II secretion system inner membrane protein GspF low > 75
Vibrio cholerae E7946 ATCC 55056 0.67 CSW01_05640 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA 0.56 CSW01_13780 type II secretion system protein GspF — —
Alteromonas macleodii MIT1002 0.63 MIT1002_01378 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.52 MIT1002_03978 General secretion pathway protein F low > 70
Acinetobacter radioresistens SK82 0.57 MPMX26_02454 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.40 MPMX26_00283 Type II secretion system protein F low > 36
Shewanella loihica PV-4 0.56 Shew_1718 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) 0.54 Shew_3617 general secretion pathway protein F (RefSeq) — —
Shewanella sp. ANA-3 0.56 Shewana3_2520 aminotransferase (RefSeq) 0.54 Shewana3_0153 general secretion pathway protein F (RefSeq) — —
Shewanella oneidensis MR-1 0.56 SO2741 bioA adenosylmethionine--8-amino-7-oxononanoate aminotransferase (NCBI ptt file) 0.52 SO0168 gspF general secretion pathway protein F (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.51 Sama_1437 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) 0.53 Sama_0171 general secretion pathway protein F (RefSeq) — —
Caulobacter crescentus NA1000 0.46 CCNA_01648 adenosylmethionine-8-amino-7-oxononanoate 0.31 CCNA_00174 type II secretion pathway protein F 0.55 58
Caulobacter crescentus NA1000 Δfur 0.46 CCNA_01648 adenosylmethionine-8-amino-7-oxononanoate 0.31 CCNA_00174 type II secretion pathway protein F low > 67
Pseudomonas sp. S08-1 0.35 OH686_10850 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.40 OH686_11780 type II secretion system protein F — —
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_08045 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.39 AO353_12555 type II secretion system protein GspF low > 101
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_0454 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme 0.27 Psyr_0797 type II secretion system protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_0454 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme 0.27 Psyr_0797 type II secretion system protein low > 86
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_13570 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.37 AO356_09335 type II secretion system protein GspF low > 104
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_1044 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.39 PfGW456L13_264 General secretion pathway protein F low > 87
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_4631 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.37 Pf6N2E2_3744 General secretion pathway protein F low > 103
Kangiella aquimarina DSM 16071 0.34 B158DRAFT_0179 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.46 B158DRAFT_0691 general secretion pathway protein F — —
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_2377 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.27 Pf1N1B4_2841 Type IV fimbrial assembly protein PilC low > 87
Pseudomonas stutzeri RCH2 0.34 Psest_0306 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.44 Psest_4201 general secretion pathway protein F low > 67
Pseudomonas sp. RS175 0.34 PFR28_04208 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.32 PFR28_01752 Type II secretion system protein F low > 88
Pseudomonas fluorescens SBW25 0.34 PFLU_RS28195 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.34 PFLU_RS11900 type II secretion system protein GspF low > 109
Pseudomonas fluorescens SBW25-INTG 0.34 PFLU_RS28195 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.34 PFLU_RS11900 type II secretion system protein GspF low > 109
Pseudomonas simiae WCS417 0.33 PS417_26540 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.34 PS417_11305 general secretion pathway protein GspF low > 88
Marinobacter adhaerens HP15 0.33 HP15_2925 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.43 HP15_1603 general secretion pathway protein F low > 73
Xanthomonas campestris pv. campestris strain 8004 0.33 Xcc-8004.1559.1 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.34 Xcc-8004.944.1 General secretion pathway protein F low > 74
Lysobacter sp. OAE881 0.32 ABIE51_RS05265 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.26 ABIE51_RS04810 type II secretion system F family protein low > 62
Variovorax sp. SCN45 0.32 GFF145 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.31 GFF102 General secretion pathway protein F low > 127
Synechococcus elongatus PCC 7942 0.32 Synpcc7942_0031 bioA aminotransferase 0.26 Synpcc7942_2069 pilC fimbrial assembly protein PilC-like — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF3993 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.31 GFF1392 General secretion pathway protein F / Type II secretory pathway, component PulF low > 90
Paraburkholderia graminis OAS925 0.30 ABIE53_000580 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.35 ABIE53_000298 general secretion pathway protein F low > 113
Desulfovibrio vulgaris Hildenborough JW710 0.30 DVU2559 bioA adenosylmethionine--8-amino-7-oxononanoate aminotransferase (TIGR) 0.25 DVU1271 general secretion pathway protein F, putative (TIGR) low > 55
Burkholderia phytofirmans PsJN 0.30 BPHYT_RS02165 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.37 BPHYT_RS19605 general secretion pathway protein F low > 109
Ralstonia sp. UNC404CL21Col 0.30 ABZR87_RS12335 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.35 ABZR87_RS03460 type II secretion system inner membrane protein GspF low > 80
Sphingomonas koreensis DSMZ 15582 0.30 Ga0059261_3674 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.33 Ga0059261_3953 Type II secretory pathway, component PulF low > 68
Paraburkholderia bryophila 376MFSha3.1 0.30 H281DRAFT_02094 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.35 H281DRAFT_02354 general secretion pathway protein F low > 103
Ralstonia solanacearum PSI07 0.30 RPSI07_RS16705 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.34 RPSI07_RS09505 type II secretion system protein GspF low > 81
Acidovorax sp. GW101-3H11 0.29 Ac3H11_3828 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.31 Ac3H11_4054 General secretion pathway protein F / Type II secretory pathway, component PulF low > 79
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS00815 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.34 RALBFv3_RS07755 type II secretion system protein GspF low > 76
Variovorax sp. OAS795 0.29 ABID97_RS16265 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.31 ABID97_RS06940 type II secretion system inner membrane protein GspF low > 91
Ralstonia solanacearum UW163 0.29 UW163_RS14150 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.34 UW163_RS05870 type II secretion system protein GspF — —
Ralstonia solanacearum GMI1000 0.29 RS_RS07430 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.34 RS_RS15650 type II secretion system protein GspF low > 80
Fusobacterium nucleatum SB010 0.29 HUW76_05105 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.15 HUW76_00170 type II secretion system F family protein low > 35
Dechlorosoma suillum PS 0.29 Dsui_2880 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.27 Dsui_1319 type II secretory pathway, component PulF low > 51
Paraburkholderia sabiae LMG 24235 0.28 QEN71_RS01100 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.35 QEN71_RS29520 type II secretion system inner membrane protein GspF — —

Not shown: 38 genomes with orthologs for ECD_00741 only; 0 genomes with orthologs for ECD_02836 only