Conservation of cofitness between ECD_03631 and ECD_02214 in Escherichia coli BL21

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03631 potassium transporter 1.0 ECD_02214 transcriptional repressor of flagellar, motility and chemotaxis genes 0.43 11
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_04306 Low affinity potassium transport system protein kup 1.00 OHPLBJKB_01416 HTH-type transcriptional regulator HdfR low > 73
Escherichia coli Nissle 1917 1.00 ECOLIN_RS21545 low affinity potassium transporter Kup 0.95 ECOLIN_RS13290 transcriptional regulator LrhA low > 52
Escherichia coli ECRC62 1.00 BNILDI_04635 kup low affinity potassium transporter Kup 1.00 BNILDI_13370 lrhA transcriptional regulator LrhA
Escherichia coli BW25113 1.00 b3747 trkD potassium transporter (NCBI) 1.00 b2289 lrhA DNA-binding transcriptional repressor of flagellar, motility and chemotaxis genes (NCBI) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_06890 kup low affinity potassium transporter Kup 1.00 NOLOHH_14450 lrhA transcriptional regulator LrhA low > 57
Escherichia coli ECOR38 1.00 HEPCGN_13465 kup low affinity potassium transporter Kup 1.00 HEPCGN_22035 lrhA transcriptional regulator LrhA low > 85
Escherichia fergusonii Becca 1.00 EFB2_04886 Low affinity potassium transport system protein kup 1.00 EFB2_01569 HTH-type transcriptional regulator HdfR low > 86
Escherichia coli ECRC99 1.00 KEDOAH_13395 kup low affinity potassium transporter Kup 1.00 KEDOAH_05365 lrhA transcriptional regulator LrhA
Escherichia coli ECRC101 1.00 OKFHMN_14755 kup low affinity potassium transporter Kup 1.00 OKFHMN_22830 lrhA transcriptional regulator LrhA
Escherichia coli ECRC98 1.00 JDDGAC_18375 kup low affinity potassium transporter Kup 1.00 JDDGAC_26795 lrhA transcriptional regulator LrhA
Escherichia coli ECRC102 1.00 NIAGMN_12510 kup low affinity potassium transporter Kup 1.00 NIAGMN_20600 lrhA transcriptional regulator LrhA
Escherichia coli ECRC101 0.99 MCAODC_05260 kup low affinity potassium transporter Kup 1.00 MCAODC_13870 lrhA transcriptional regulator LrhA
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.96 GFF1710 Kup system potassium uptake protein 0.86 GFF1893 LysR family transcriptional regulator lrhA low > 78
Enterobacter asburiae PDN3 0.95 EX28DRAFT_4023 potassium uptake protein 0.85 EX28DRAFT_0320 Transcriptional regulator low > 76
Enterobacter sp. TBS_079 0.94 MPMX20_04620 Low affinity potassium transport system protein kup 0.83 MPMX20_03219 HTH-type transcriptional regulator HdfR low > 85
Klebsiella michiganensis M5al 0.94 BWI76_RS00265 potassium transporter Kup 0.63 BWI76_RS20200 transcriptional regulator LrhA low > 92
Pantoea sp. MT58 0.88 IAI47_00330 low affinity potassium transporter Kup 0.73 IAI47_06355 transcriptional regulator LrhA low > 76
Serratia liquefaciens MT49 0.88 IAI46_25080 low affinity potassium transporter Kup 0.72 IAI46_17715 transcriptional regulator LrhA low > 86
Rahnella sp. WP5 0.86 EX31_RS06165 low affinity potassium transporter Kup 0.66 EX31_RS19440 transcriptional regulator LrhA low > 89
Pectobacterium carotovorum WPP14 0.85 HER17_RS21570 low affinity potassium transporter Kup 0.65 HER17_RS07120 transcriptional regulator LrhA low > 75
Erwinia tracheiphila SCR3 0.85 LU632_RS24840 kup low affinity potassium transporter Kup 0.74 LU632_RS07960 lrhA transcriptional regulator LrhA
Dickeya dadantii 3937 0.84 DDA3937_RS00025 low affinity potassium transporter Kup 0.64 DDA3937_RS14340 transcriptional regulator LrhA low > 74
Dickeya dianthicola 67-19 0.84 HGI48_RS21355 low affinity potassium transporter Kup 0.64 HGI48_RS14315 transcriptional regulator LrhA low > 71
Dickeya dianthicola ME23 0.84 DZA65_RS22335 low affinity potassium transporter Kup 0.64 DZA65_RS14990 transcriptional regulator LrhA low > 75
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS06040 potassium transporter Kup 0.22 QEN71_RS23685 LysR substrate-binding domain-containing protein low > 153
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS12515 potassium transporter Kup 0.23 BPHYT_RS10150 LysR family transcriptional regulator
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_00529 KUP system potassium uptake protein 0.23 H281DRAFT_05286 transcriptional regulator, LysR family low > 103
Paraburkholderia graminis OAS925 0.50 ABIE53_002729 KUP system potassium uptake protein 0.22 ABIE53_004884 DNA-binding transcriptional LysR family regulator low > 113
Dyella japonica UNC79MFTsu3.2 0.50 ABZR86_RS10835 potassium transporter Kup 0.22 ABZR86_RS17870 LysR family transcriptional regulator
Pseudomonas fluorescens FW300-N2E3 0.50 AO353_16880 potassium transporter Kup 0.22 AO353_19100 LysR family transcriptional regulator low > 101
Pseudomonas fluorescens FW300-N1B4 0.50 Pf1N1B4_3162 Kup system potassium uptake protein 0.43 Pf1N1B4_4421 LysR family transcriptional regulator lrhA
Pseudomonas fluorescens SBW25 0.50 PFLU_RS05955 potassium transporter Kup 0.43 PFLU_RS10960 transcriptional regulator LrhA low > 109
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS05955 potassium transporter Kup 0.43 PFLU_RS10960 transcriptional regulator LrhA low > 109
Pseudomonas simiae WCS417 0.50 PS417_05885 potassium transporter Kup 0.23 PS417_08510 LysR family transcriptional regulator low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.50 Psyr_1394 potassium transporter 0.25 Psyr_3624 transcriptional regulator, LysR family low > 86
Pseudomonas syringae pv. syringae B728a 0.50 Psyr_1394 potassium transporter 0.25 Psyr_3624 transcriptional regulator, LysR family low > 86
Pseudomonas fluorescens FW300-N2E2 0.49 Pf6N2E2_1789 Kup system potassium uptake protein 0.40 Pf6N2E2_1500 LysR family transcriptional regulator lrhA low > 103
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS07555 potassium transporter Kup 0.42 RR42_RS30590 LysR family transcriptional regulator low > 128
Dechlorosoma suillum PS 0.49 Dsui_3457 K+ transporter 0.25 Dsui_1371 transcriptional regulator low > 51
Pseudomonas sp. S08-1 0.48 OH686_18885 Kup system potassium uptake protein 0.26 OH686_22455 Transcriptional regulator, LysR family low > 80
Rhodanobacter denitrificans MT42 0.48 LRK55_RS04685 potassium transporter Kup 0.26 LRK55_RS15155 LysR substrate-binding domain-containing protein
Rhodanobacter denitrificans FW104-10B01 0.48 LRK54_RS04905 potassium transporter Kup 0.26 LRK54_RS15435 LysR substrate-binding domain-containing protein
Rhodopseudomonas palustris CGA009 0.48 TX73_015670 potassium transporter Kup 0.22 TX73_021520 LysR substrate-binding domain-containing protein low > 86
Azospirillum sp. SherDot2 0.48 MPMX19_02182 Low affinity potassium transport system protein kup 0.27 MPMX19_05344 HTH-type transcriptional regulator YofA low > 112
Azospirillum brasilense Sp245 0.48 AZOBR_RS11160 potassium transporter Kup 0.26 AZOBR_RS17225 LysR family transcriptional regulator low > 97
Pseudomonas fluorescens GW456-L13 0.48 PfGW456L13_4652 Kup system potassium uptake protein 0.24 PfGW456L13_2241 Transcriptional regulator, LysR family low > 87
Ralstonia solanacearum UW163 0.48 UW163_RS14870 potassium transporter Kup 0.16 UW163_RS18270 LysR family transcriptional regulator
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS01560 potassium transporter Kup 0.16 RALBFv3_RS16915 LysR family transcriptional regulator low > 76
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS19680 potassium transporter Kup 0.37 ABZR87_RS11285 LysR substrate-binding domain-containing protein low > 80
Ralstonia solanacearum GMI1000 0.48 RS_RS08170 potassium transporter Kup 0.19 RS_RS03085 LysR family transcriptional regulator
Hydrogenophaga sp. GW460-11-11-14-LB1 0.47 GFF2646 Kup system potassium uptake protein 0.33 GFF3101 LysR family transcriptional regulator lrhA low > 90
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS00295 potassium transporter Kup 0.20 HSERO_RS17670 LysR family transcriptional regulator
Acidovorax sp. GW101-3H11 0.47 Ac3H11_709 Kup system potassium uptake protein 0.17 Ac3H11_4527 Transcriptional regulator, LysR family low > 79
Pseudomonas putida KT2440 0.46 PP_1200 Probable potassium transport system protein kup 0.24 PP_1863 Transcriptional regulator, LysR family low > 96
Pseudomonas sp. RS175 0.46 PFR28_00487 Low affinity potassium transport system protein kup 0.23 PFR28_00975 HTH-type transcriptional regulator HdfR low > 88
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_05595 potassium transporter Kup 0.40 AO356_23985 LysR family transcriptional regulator low > 104
Variovorax sp. SCN45 0.46 GFF6324 Kup system potassium uptake protein 0.37 GFF1753 LysR family transcriptional regulator lrhA low > 127
Variovorax sp. OAS795 0.45 ABID97_RS04610 potassium transporter Kup 0.38 ABID97_RS22410 LysR substrate-binding domain-containing protein low > 91
Sphingomonas koreensis DSMZ 15582 0.45 Ga0059261_3901 K+ transporter 0.20 Ga0059261_3000 Transcriptional regulator
Rhizobium sp. OAE497 0.44 ABIE40_RS19945 potassium transporter Kup 0.26 ABIE40_RS03500 LysR substrate-binding domain-containing protein low > 107
Caulobacter crescentus NA1000 Δfur 0.43 CCNA_00130 Kup system potassium uptake protein 0.21 CCNA_03625 transcriptional regulator CztR
Caulobacter crescentus NA1000 0.43 CCNA_00130 Kup system potassium uptake protein 0.21 CCNA_03625 transcriptional regulator CztR
Agrobacterium fabrum C58 0.42 Atu0711 potassium uptake protein 0.27 Atu0654 transcriptional regulator, LysR family low > 89
Bosea sp. OAE506 0.41 ABIE41_RS09025 potassium transporter Kup 0.27 ABIE41_RS23080 LysR substrate-binding domain-containing protein
Sinorhizobium meliloti 1021 0.41 SMc00873 KUP system potassium uptake transmembrane protein 0.25 SMc00820 transcriptional regulator low > 103

Not shown: 11 genomes with orthologs for ECD_03631 only; 6 genomes with orthologs for ECD_02214 only