| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Dechlorosoma suillum PS | 1.0 | Dsui_3401 | | putative Zn-dependent protease-like protein | 1.0 | Dsui_2462 | | DNA repair protein RecO | 0.79 | 8 |
| Variovorax sp. SCN45 | 0.70 | GFF4449 | | TldD protein, part of TldE/TldD proteolytic complex | 0.22 | GFF3872 | | DNA recombination and repair protein RecO | low | > 127 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.70 | GFF580 | | TldD protein, part of TldE/TldD proteolytic complex | 0.24 | GFF3348 | | DNA recombination and repair protein RecO | low | > 90 |
| Acidovorax sp. GW101-3H11 | 0.70 | Ac3H11_4036 | | TldD protein, part of TldE/TldD proteolytic complex | 0.18 | Ac3H11_1564 | | DNA recombination and repair protein RecO | low | > 79 |
| Variovorax sp. OAS795 | 0.69 | ABID97_RS06335 | | metalloprotease TldD | 0.22 | ABID97_RS08375 | | DNA repair protein RecO | 0.51 | 32 |
| Cupriavidus basilensis FW507-4G11 | 0.69 | RR42_RS05875 | | protease TldD | 0.43 | RR42_RS14030 | | DNA recombination protein RecO | low | > 128 |
| Ralstonia solanacearum GMI1000 | 0.68 | RS_RS13315 | | metalloprotease TldD | 0.45 | RS_RS05275 | | DNA repair protein RecO | low | > 80 |
| Ralstonia solanacearum IBSBF1503 | 0.68 | RALBFv3_RS05455 | | metalloprotease TldD | 0.44 | RALBFv3_RS14495 | | DNA repair protein RecO | low | > 76 |
| Ralstonia solanacearum UW163 | 0.68 | UW163_RS08170 | | metalloprotease TldD | 0.44 | UW163_RS11960 | | DNA repair protein RecO | — | — |
| Herbaspirillum seropedicae SmR1 | 0.68 | HSERO_RS07155 | | peptidase C69 | 0.44 | HSERO_RS09670 | | DNA repair protein RecO | low | > 78 |
| Ralstonia solanacearum PSI07 | 0.68 | RPSI07_RS11850 | | metalloprotease TldD | 0.45 | RPSI07_RS18965 | | DNA repair protein RecO | low | > 81 |
| Ralstonia sp. UNC404CL21Col | 0.67 | ABZR87_RS01105 | | metalloprotease TldD | 0.44 | ABZR87_RS10215 | | DNA repair protein RecO | low | > 80 |
| Dyella japonica UNC79MFTsu3.2 | 0.65 | ABZR86_RS21715 | | metalloprotease TldD | 0.30 | ABZR86_RS07140 | | DNA repair protein RecO | low | > 74 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.63 | Xcc-8004.1883.1 | | TldD protein, part of TldE/TldD proteolytic complex | 0.25 | Xcc-8004.3671.1 | | DNA recombination and repair protein RecO | low | > 74 |
| Rhodanobacter sp. FW510-T8 | 0.62 | OKGIIK_10280 | tldD | metalloprotease TldD | 0.30 | OKGIIK_07860 | recO | DNA repair protein RecO | low | > 52 |
| Rhodanobacter denitrificans MT42 | 0.62 | LRK55_RS03145 | | metalloprotease TldD | 0.30 | LRK55_RS16695 | | DNA repair protein RecO | low | > 63 |
| Alteromonas macleodii MIT1002 | 0.62 | MIT1002_00227 | | protease TldD | 0.25 | MIT1002_00790 | | Recombination protein O | low | > 70 |
| Rhodanobacter denitrificans FW104-10B01 | 0.62 | LRK54_RS03395 | | metalloprotease TldD | 0.30 | LRK54_RS16980 | | DNA repair protein RecO | low | > 59 |
| Pseudomonas putida KT2440 | 0.61 | PP_0940 | | putative protease involved in Microcin B17 maturation and in sensitivity to the DNA gyrase inhibitor LetD | 0.26 | PP_1435 | | DNA repair protein RecO | low | > 96 |
| Shewanella sp. ANA-3 | 0.61 | Shewana3_3641 | | microcin-processing peptidase 2 (RefSeq) | 0.21 | Shewana3_3024 | | DNA repair protein RecO (RefSeq) | low | > 73 |
| Lysobacter sp. OAE881 | 0.60 | ABIE51_RS06795 | | metalloprotease TldD | 0.27 | ABIE51_RS13850 | | DNA repair protein RecO | low | > 62 |
| Shewanella loihica PV-4 | 0.60 | Shew_0410 | | peptidase U62, modulator of DNA gyrase (RefSeq) | 0.23 | Shew_1056 | | DNA repair protein RecO (RefSeq) | low | > 60 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.59 | Psyr_4156 | | microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62 | 0.26 | Psyr_3949 | | DNA replication and repair protein RecO | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.59 | Psyr_4156 | | microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62 | 0.26 | Psyr_3949 | | DNA replication and repair protein RecO | low | > 86 |
| Pantoea sp. MT58 | 0.59 | IAI47_02465 | | metalloprotease TldD | 0.30 | IAI47_04890 | | DNA repair protein RecO | low | > 76 |
| Pseudomonas fluorescens GW456-L13 | 0.59 | PfGW456L13_5026 | | TldD protein, part of TldE/TldD proteolytic complex | 0.29 | PfGW456L13_4838 | | DNA recombination and repair protein RecO | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.59 | AO356_07095 | | protease TldD | 0.30 | AO356_17505 | | DNA repair protein RecO | low | > 104 |
| Pectobacterium carotovorum WPP14 | 0.59 | HER17_RS20140 | | metalloprotease TldD | 0.29 | HER17_RS05825 | | DNA repair protein RecO | low | > 75 |
| Pseudomonas fluorescens FW300-N2E3 | 0.59 | AO353_05215 | | protease TldD | 0.29 | AO353_04500 | | DNA repair protein RecO | low | > 101 |
| Shewanella oneidensis MR-1 | 0.59 | SO4091 | tldD | tldD protein (NCBI ptt file) | 0.20 | SO1350 | recO | DNA repair protein RecO (NCBI ptt file) | low | > 76 |
| Serratia liquefaciens MT49 | 0.59 | IAI46_22685 | | metalloprotease TldD | 0.29 | IAI46_19540 | | DNA repair protein RecO | low | > 86 |
| Pseudomonas fluorescens FW300-N1B4 | 0.58 | Pf1N1B4_1092 | | TldD protein, part of TldE/TldD proteolytic complex | 0.29 | Pf1N1B4_890 | | DNA recombination and repair protein RecO | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.58 | Pf6N2E2_3280 | | TldD protein, part of TldE/TldD proteolytic complex | 0.30 | Pf6N2E2_5428 | | DNA recombination and repair protein RecO | low | > 103 |
| Pseudomonas simiae WCS417 | 0.58 | PS417_04285 | | protease TldD | 0.28 | PS417_05200 | | DNA recombination protein RecO | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.58 | PFLU_RS04340 | | metalloprotease TldD | 0.27 | PFLU_RS05270 | | DNA repair protein RecO | low | > 109 |
| Pseudomonas sp. S08-1 | 0.58 | OH686_08580 | | TldD protein, part of TldE/TldD proteolytic complex | 0.25 | OH686_20090 | | DNA repair protein RecO | low | > 80 |
| Pseudomonas fluorescens SBW25 | 0.58 | PFLU_RS04340 | | metalloprotease TldD | 0.27 | PFLU_RS05270 | | DNA repair protein RecO | low | > 109 |
| Shewanella amazonensis SB2B | 0.58 | Sama_0474 | | TldD protein (RefSeq) | 0.27 | Sama_0882 | | DNA repair protein RecO (RefSeq) | low | > 62 |
| Dickeya dadantii 3937 | 0.58 | DDA3937_RS01460 | | metalloprotease TldD | 0.29 | DDA3937_RS15725 | | DNA repair protein RecO | low | > 74 |
| Dickeya dianthicola 67-19 | 0.58 | HGI48_RS01380 | | metalloprotease TldD | 0.29 | HGI48_RS15810 | | DNA repair protein RecO | low | > 71 |
| Pseudomonas stutzeri RCH2 | 0.58 | Psest_3320 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.27 | Psest_3090 | | DNA repair protein RecO | low | > 67 |
| Pseudomonas sp. RS175 | 0.57 | PFR28_00161 | | Metalloprotease TldD | 0.29 | PFR28_03521 | | DNA repair protein RecO | low | > 88 |
| Klebsiella michiganensis M5al | 0.57 | BWI76_RS25470 | | metalloprotease TldD | 0.29 | BWI76_RS21310 | | DNA repair protein RecO | low | > 92 |
| Dickeya dianthicola ME23 | 0.57 | DZA65_RS01440 | | metalloprotease TldD | 0.29 | DZA65_RS16890 | | DNA repair protein RecO | low | > 75 |
| Enterobacter sp. TBS_079 | 0.57 | MPMX20_04151 | | Metalloprotease TldD | 0.25 | MPMX20_03436 | | DNA repair protein RecO | low | > 85 |
| Escherichia fergusonii Becca | 0.57 | EFB2_00586 | | Metalloprotease TldD | 0.28 | EFB2_01331 | | DNA repair protein RecO | low | > 86 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.57 | OHPLBJKB_00460 | | Metalloprotease TldD | 0.28 | OHPLBJKB_01142 | | DNA repair protein RecO | low | > 73 |
| Escherichia coli BL21 | 0.57 | ECD_03104 | | putative peptidase | 0.28 | ECD_02459 | | gap repair protein | low | > 60 |
| Escherichia coli ECRC99 | 0.57 | KEDOAH_10395 | tldD | metalloprotease TldD | 0.28 | KEDOAH_06800 | recO | DNA repair protein RecO | — | — |
| Escherichia coli ECRC62 | 0.57 | BNILDI_01980 | tldD | metalloprotease TldD | 0.28 | BNILDI_11895 | recO | DNA repair protein RecO | — | — |
| Escherichia coli ECRC101 | 0.57 | MCAODC_08275 | tldD | metalloprotease TldD | 0.28 | MCAODC_11950 | recO | DNA repair protein RecO | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.57 | GFF2140 | | TldD protein, part of TldE/TldD proteolytic complex | 0.28 | GFF2473 | | DNA recombination and repair protein RecO | low | > 78 |
| Escherichia coli Nissle 1917 | 0.57 | ECOLIN_RS18595 | | metalloprotease TldD | 0.28 | ECOLIN_RS14520 | | DNA repair protein RecO | — | — |
| Escherichia coli BW25113 | 0.57 | b3244 | tldD | predicted peptidase (NCBI) | 0.28 | b2565 | recO | DNA repair protein RecO (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 0.57 | HEPCGN_16620 | tldD | metalloprotease TldD | 0.28 | HEPCGN_20565 | recO | DNA repair protein RecO | low | > 85 |
| Escherichia coli ECOR27 | 0.57 | NOLOHH_09555 | tldD | metalloprotease TldD | 0.28 | NOLOHH_13095 | recO | DNA repair protein RecO | low | > 57 |
| Escherichia coli ECRC101 | 0.57 | OKFHMN_17755 | tldD | metalloprotease TldD | 0.28 | OKFHMN_21420 | recO | DNA repair protein RecO | — | — |
| Escherichia coli ECRC102 | 0.57 | NIAGMN_15515 | tldD | metalloprotease TldD | 0.28 | NIAGMN_19190 | recO | DNA repair protein RecO | — | — |
| Escherichia coli ECRC98 | 0.57 | JDDGAC_21380 | tldD | metalloprotease TldD | 0.28 | JDDGAC_25085 | recO | DNA repair protein RecO | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.57 | CSW01_02220 | | metalloprotease TldD | 0.26 | CSW01_12445 | | DNA repair protein RecO | low | > 62 |
| Enterobacter asburiae PDN3 | 0.57 | EX28DRAFT_3295 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.28 | EX28DRAFT_0081 | | DNA replication and repair protein RecO | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.57 | LU632_RS21420 | tldD | metalloprotease TldD | 0.31 | LU632_RS15375 | recO | DNA repair protein RecO | low | > 74 |
| Kangiella aquimarina DSM 16071 | 0.56 | B158DRAFT_2072 | | microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62 | 0.26 | B158DRAFT_2189 | | DNA replication and repair protein RecO | low | > 40 |
| Rahnella sp. WP5 | 0.56 | EX31_RS12265 | | metalloprotease TldD | 0.29 | EX31_RS21845 | | DNA repair protein RecO | low | > 89 |
Not shown: 27 genomes with orthologs for Dsui_3401 only; 2 genomes with orthologs for Dsui_2462 only