| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Dechlorosoma suillum PS | 1.0 | Dsui_1234 | | putative Zn-dependent protease-like protein | 1.0 | Dsui_2462 | | DNA repair protein RecO | 0.83 | 7 |
| Ralstonia solanacearum IBSBF1503 | 0.56 | RALBFv3_RS13965 | | metalloprotease PmbA | 0.44 | RALBFv3_RS14495 | | DNA repair protein RecO | low | > 76 |
| Ralstonia solanacearum UW163 | 0.56 | UW163_RS15845 | | metalloprotease PmbA | 0.44 | UW163_RS11960 | | DNA repair protein RecO | — | — |
| Ralstonia sp. UNC404CL21Col | 0.55 | ABZR87_RS09660 | | metalloprotease PmbA | 0.44 | ABZR87_RS10215 | | DNA repair protein RecO | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.55 | RPSI07_RS19505 | | metalloprotease PmbA | 0.45 | RPSI07_RS18965 | | DNA repair protein RecO | low | > 81 |
| Herbaspirillum seropedicae SmR1 | 0.55 | HSERO_RS09265 | | peptidase C69 | 0.44 | HSERO_RS09670 | | DNA repair protein RecO | low | > 78 |
| Cupriavidus basilensis FW507-4G11 | 0.54 | RR42_RS14750 | | peptidase PMbA | 0.43 | RR42_RS14030 | | DNA recombination protein RecO | low | > 128 |
| Ralstonia solanacearum GMI1000 | 0.53 | RS_RS04700 | | metalloprotease PmbA | 0.45 | RS_RS05275 | | DNA repair protein RecO | low | > 80 |
| Acidovorax sp. GW101-3H11 | 0.51 | Ac3H11_3262 | | TldE protein, part of TldE/TldD proteolytic complex | 0.18 | Ac3H11_1564 | | DNA recombination and repair protein RecO | low | > 79 |
| Variovorax sp. OAS795 | 0.50 | ABID97_RS20695 | | metalloprotease PmbA | 0.22 | ABID97_RS08375 | | DNA repair protein RecO | 0.49 | 29 |
| Variovorax sp. SCN45 | 0.50 | GFF4697 | | TldE protein, part of TldE/TldD proteolytic complex | 0.22 | GFF3872 | | DNA recombination and repair protein RecO | low | > 127 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.49 | GFF3655 | | TldE protein, part of TldE/TldD proteolytic complex | 0.24 | GFF3348 | | DNA recombination and repair protein RecO | low | > 90 |
| Pseudomonas fluorescens FW300-N2E2 | 0.48 | Pf6N2E2_3278 | | TldE protein, part of TldE/TldD proteolytic complex | 0.30 | Pf6N2E2_5428 | | DNA recombination and repair protein RecO | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.48 | AO356_07085 | | peptidase PmbA | 0.30 | AO356_17505 | | DNA repair protein RecO | low | > 104 |
| Pseudomonas putida KT2440 | 0.48 | PP_0942 | | regulatory protease | 0.26 | PP_1435 | | DNA repair protein RecO | low | > 96 |
| Pseudomonas sp. RS175 | 0.47 | PFR28_00163 | | Metalloprotease PmbA | 0.29 | PFR28_03521 | | DNA repair protein RecO | low | > 88 |
| Pseudomonas simiae WCS417 | 0.47 | PS417_04295 | | peptidase PmbA | 0.28 | PS417_05200 | | DNA recombination protein RecO | low | > 88 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.47 | Psyr_4154 | | microcin-processing peptidase 1, Unknown type peptidase, MEROPS family U62 | 0.26 | Psyr_3949 | | DNA replication and repair protein RecO | low | > 86 |
| Pseudomonas fluorescens SBW25-INTG | 0.47 | PFLU_RS04350 | | metalloprotease PmbA | 0.27 | PFLU_RS05270 | | DNA repair protein RecO | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.47 | PFLU_RS04350 | | metalloprotease PmbA | 0.27 | PFLU_RS05270 | | DNA repair protein RecO | low | > 109 |
| Pseudomonas syringae pv. syringae B728a | 0.47 | Psyr_4154 | | microcin-processing peptidase 1, Unknown type peptidase, MEROPS family U62 | 0.26 | Psyr_3949 | | DNA replication and repair protein RecO | low | > 86 |
| Pseudomonas fluorescens FW300-N1B4 | 0.47 | Pf1N1B4_1090 | | TldE protein, part of TldE/TldD proteolytic complex | 0.29 | Pf1N1B4_890 | | DNA recombination and repair protein RecO | low | > 87 |
| Pseudomonas fluorescens GW456-L13 | 0.46 | PfGW456L13_5024 | | TldE protein, part of TldE/TldD proteolytic complex | 0.29 | PfGW456L13_4838 | | DNA recombination and repair protein RecO | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.46 | AO353_05205 | | peptidase PmbA | 0.29 | AO353_04500 | | DNA repair protein RecO | low | > 101 |
| Dyella japonica UNC79MFTsu3.2 | 0.45 | ABZR86_RS21700 | | metalloprotease PmbA | 0.30 | ABZR86_RS07140 | | DNA repair protein RecO | low | > 74 |
| Pseudomonas stutzeri RCH2 | 0.45 | Psest_3318 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.27 | Psest_3090 | | DNA repair protein RecO | low | > 67 |
| Pseudomonas sp. S08-1 | 0.45 | OH686_08570 | | TldE protein, part of TldE/TldD proteolytic complex | 0.25 | OH686_20090 | | DNA repair protein RecO | low | > 80 |
| Rhodanobacter sp. FW510-T8 | 0.44 | OKGIIK_10260 | pmbA | metalloprotease PmbA | 0.30 | OKGIIK_07860 | recO | DNA repair protein RecO | low | > 52 |
| Rhodanobacter denitrificans MT42 | 0.44 | LRK55_RS03125 | | metalloprotease PmbA | 0.30 | LRK55_RS16695 | | DNA repair protein RecO | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.44 | LRK54_RS03375 | | metalloprotease PmbA | 0.30 | LRK54_RS16980 | | DNA repair protein RecO | low | > 59 |
| Shewanella amazonensis SB2B | 0.44 | Sama_0482 | | PmbA protein (RefSeq) | 0.27 | Sama_0882 | | DNA repair protein RecO (RefSeq) | low | > 62 |
| Vibrio cholerae E7946 ATCC 55056 | 0.43 | CSW01_12845 | | metalloprotease PmbA | 0.26 | CSW01_12445 | | DNA repair protein RecO | low | > 62 |
| Serratia liquefaciens MT49 | 0.43 | IAI46_22575 | | metalloprotease PmbA | 0.29 | IAI46_19540 | | DNA repair protein RecO | low | > 86 |
| Rahnella sp. WP5 | 0.43 | EX31_RS12320 | | metalloprotease PmbA | 0.29 | EX31_RS21845 | | DNA repair protein RecO | low | > 89 |
| Escherichia coli BL21 | 0.43 | ECD_04103 | | putative antibiotic peptide MccB17 maturation peptidase | 0.28 | ECD_02459 | | gap repair protein | low | > 60 |
| Escherichia coli ECRC102 | 0.43 | NIAGMN_09775 | pmbA | metalloprotease PmbA | 0.28 | NIAGMN_19190 | recO | DNA repair protein RecO | — | — |
| Escherichia coli ECRC99 | 0.43 | KEDOAH_16230 | pmbA | metalloprotease PmbA | 0.28 | KEDOAH_06800 | recO | DNA repair protein RecO | — | — |
| Escherichia coli ECRC62 | 0.43 | BNILDI_07325 | pmbA | metalloprotease PmbA | 0.28 | BNILDI_11895 | recO | DNA repair protein RecO | — | — |
| Escherichia coli ECRC101 | 0.43 | OKFHMN_11925 | pmbA | metalloprotease PmbA | 0.28 | OKFHMN_21420 | recO | DNA repair protein RecO | — | — |
| Escherichia coli ECRC98 | 0.43 | JDDGAC_15565 | pmbA | metalloprotease PmbA | 0.28 | JDDGAC_25085 | recO | DNA repair protein RecO | — | — |
| Escherichia coli ECRC101 | 0.43 | MCAODC_02430 | pmbA | metalloprotease PmbA | 0.28 | MCAODC_11950 | recO | DNA repair protein RecO | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.43 | OHPLBJKB_03800 | | Metalloprotease PmbA | 0.28 | OHPLBJKB_01142 | | DNA repair protein RecO | low | > 73 |
| Escherichia coli BW25113 | 0.43 | b4235 | pmbA | predicted peptidase required for the maturation and secretion of the antibiotic peptide MccB17 (NCBI) | 0.28 | b2565 | recO | DNA repair protein RecO (NCBI) | low | > 76 |
| Escherichia coli ECOR27 | 0.43 | NOLOHH_04185 | pmbA | metalloprotease PmbA | 0.28 | NOLOHH_13095 | recO | DNA repair protein RecO | low | > 57 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.43 | GFF904 | | TldE protein, part of TldE/TldD proteolytic complex | 0.28 | GFF2473 | | DNA recombination and repair protein RecO | low | > 78 |
| Escherichia coli ECOR38 | 0.43 | HEPCGN_10125 | pmbA | metalloprotease PmbA | 0.28 | HEPCGN_20565 | recO | DNA repair protein RecO | low | > 85 |
| Pectobacterium carotovorum WPP14 | 0.43 | HER17_RS20090 | | metalloprotease PmbA | 0.29 | HER17_RS05825 | | DNA repair protein RecO | low | > 75 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.42 | Xcc-8004.1885.1 | | TldE protein, part of TldE/TldD proteolytic complex | 0.25 | Xcc-8004.3671.1 | | DNA recombination and repair protein RecO | low | > 74 |
| Escherichia fergusonii Becca | 0.42 | EFB2_04298 | | Metalloprotease PmbA | 0.28 | EFB2_01331 | | DNA repair protein RecO | low | > 86 |
| Klebsiella michiganensis M5al | 0.42 | BWI76_RS02850 | | metalloprotease PmbA | 0.29 | BWI76_RS21310 | | DNA repair protein RecO | low | > 92 |
| Alteromonas macleodii MIT1002 | 0.42 | MIT1002_00230 | | peptidase PmbA | 0.25 | MIT1002_00790 | | Recombination protein O | low | > 70 |
| Escherichia coli Nissle 1917 | 0.42 | ECOLIN_RS24570 | | metalloprotease PmbA | 0.28 | ECOLIN_RS14520 | | DNA repair protein RecO | — | — |
| Enterobacter sp. TBS_079 | 0.42 | MPMX20_00517 | | Metalloprotease PmbA | 0.25 | MPMX20_03436 | | DNA repair protein RecO | low | > 85 |
| Enterobacter asburiae PDN3 | 0.42 | EX28DRAFT_3422 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.28 | EX28DRAFT_0081 | | DNA replication and repair protein RecO | low | > 76 |
| Lysobacter sp. OAE881 | 0.41 | ABIE51_RS06805 | | metalloprotease PmbA | 0.27 | ABIE51_RS13850 | | DNA repair protein RecO | low | > 62 |
| Dickeya dadantii 3937 | 0.41 | DDA3937_RS01500 | | metalloprotease PmbA | 0.29 | DDA3937_RS15725 | | DNA repair protein RecO | low | > 74 |
| Shewanella sp. ANA-3 | 0.41 | Shewana3_3631 | | microcin-processing peptidase 1 (RefSeq) | 0.21 | Shewana3_3024 | | DNA repair protein RecO (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.41 | SO4078 | pmbA | pmba protein (NCBI ptt file) | 0.20 | SO1350 | recO | DNA repair protein RecO (NCBI ptt file) | low | > 76 |
| Dickeya dianthicola 67-19 | 0.41 | HGI48_RS01415 | | metalloprotease PmbA | 0.29 | HGI48_RS15810 | | DNA repair protein RecO | low | > 71 |
| Dickeya dianthicola ME23 | 0.41 | DZA65_RS01480 | | metalloprotease PmbA | 0.29 | DZA65_RS16890 | | DNA repair protein RecO | low | > 75 |
| Shewanella loihica PV-4 | 0.40 | Shew_0416 | | peptidase U62, modulator of DNA gyrase (RefSeq) | 0.23 | Shew_1056 | | DNA repair protein RecO (RefSeq) | low | > 60 |
| Pantoea sp. MT58 | 0.40 | IAI47_02765 | | metalloprotease PmbA | 0.30 | IAI47_04890 | | DNA repair protein RecO | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.39 | LU632_RS02145 | pmbA | metalloprotease PmbA | 0.31 | LU632_RS15375 | recO | DNA repair protein RecO | low | > 74 |
| Kangiella aquimarina DSM 16071 | 0.38 | B158DRAFT_2075 | | microcin-processing peptidase 1. Unknown type peptidase. MEROPS family U62 | 0.26 | B158DRAFT_2189 | | DNA replication and repair protein RecO | low | > 40 |
Not shown: 24 genomes with orthologs for Dsui_1234 only; 2 genomes with orthologs for Dsui_2462 only