Conservation of cofitness between DDA3937_RS00840 and DDA3937_RS10655 in Dickeya dadantii 3937

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dadantii 3937 1.0 DDA3937_RS00840 CDF family cation-efflux transporter FieF 1.0 DDA3937_RS10655 class II fumarate hydratase 0.47 3
Dickeya dianthicola ME23 0.93 DZA65_RS21580 CDF family cation-efflux transporter FieF 0.97 DZA65_RS11125 class II fumarate hydratase low > 75
Dickeya dianthicola 67-19 0.93 HGI48_RS20535 CDF family cation-efflux transporter FieF 0.96 HGI48_RS10655 class II fumarate hydratase low > 71
Pectobacterium carotovorum WPP14 0.79 HER17_RS00720 CDF family cation-efflux transporter FieF 0.90 HER17_RS10755 class II fumarate hydratase low > 75
Klebsiella michiganensis M5al 0.76 BWI76_RS00730 cation-efflux pump FieF 0.85 BWI76_RS16270 fumarate hydratase, class II low > 92
Enterobacter asburiae PDN3 0.75 EX28DRAFT_4389 cation diffusion facilitator family transporter 0.85 EX28DRAFT_1608 fumarase, class II (EC 4.2.1.2) low > 76
Enterobacter sp. TBS_079 0.75 MPMX20_04553 Ferrous-iron efflux pump FieF 0.85 MPMX20_02022 Fumarate hydratase class II low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF2282 Cobalt-zinc-cadmium resistance protein 0.84 GFF1806 Fumarate hydratase class II (EC 4.2.1.2) low > 78
Escherichia coli ECRC100 0.74 OKFHMN_13835 fieF CDF family cation-efflux transporter FieF 0.82 OKFHMN_27650 fumC class II fumarate hydratase low > 80
Escherichia coli Nissle 1917 0.74 ECOLIN_RS22550 CDF family cation-efflux transporter FieF 0.82 ECOLIN_RS08995 class II fumarate hydratase
Escherichia coli HS(pFamp)R (ATCC 700891) 0.74 OHPLBJKB_04136 Ferrous-iron efflux pump FieF 0.84 OHPLBJKB_02115 Fumarate hydratase class II low > 73
Escherichia coli ECRC102 0.74 NIAGMN_11590 fieF CDF family cation-efflux transporter FieF 0.82 NIAGMN_00425 fumC class II fumarate hydratase
Escherichia coli ECOR27 0.74 NOLOHH_05970 fieF CDF family cation-efflux transporter FieF 0.82 NOLOHH_18155 fumC class II fumarate hydratase low > 75
Escherichia coli ECRC101 0.74 MCAODC_04335 fieF CDF family cation-efflux transporter FieF 0.82 MCAODC_17760 fumC class II fumarate hydratase low > 87
Escherichia fergusonii Becca 0.74 EFB2_04703 Ferrous-iron efflux pump FieF 0.82 EFB2_02381 Fumarate hydratase class II low > 86
Escherichia coli BL21 0.74 ECD_03800 ferrous iron and zinc transporter 0.82 ECD_01580 fumarate hydratase (fumarase C),aerobic Class II
Escherichia coli ECRC99 0.74 KEDOAH_14320 fieF CDF family cation-efflux transporter FieF 0.82 KEDOAH_00455 fumC class II fumarate hydratase
Escherichia coli BW25113 0.74 b3915 fieF ferrous iron efflux protein F (NCBI) 0.82 b1611 fumC fumarate hydratase (NCBI) low > 76
Escherichia coli ECRC98 0.74 JDDGAC_17460 fieF CDF family cation-efflux transporter FieF 0.82 JDDGAC_02240 fumC class II fumarate hydratase low > 86
Escherichia coli ECRC62 0.74 BNILDI_05555 fieF CDF family cation-efflux transporter FieF 0.82 BNILDI_16945 fumC class II fumarate hydratase low > 75
Escherichia coli ECOR38 0.74 HEPCGN_12480 fieF CDF family cation-efflux transporter FieF 0.82 HEPCGN_06025 fumC class II fumarate hydratase low > 87
Serratia liquefaciens MT49 0.74 IAI46_24650 CDF family cation-efflux transporter FieF 0.87 IAI46_11655 class II fumarate hydratase low > 86
Pantoea sp. MT58 0.71 IAI47_00775 CDF family cation-efflux transporter FieF 0.86 IAI47_10335 class II fumarate hydratase low > 76
Erwinia tracheiphila SCR3 0.67 LU632_RS21845 fieF CDF family cation-efflux transporter FieF 0.84 LU632_RS12335 fumC class II fumarate hydratase low > 74
Vibrio cholerae E7946 ATCC 55056 0.60 CSW01_13580 cation-efflux pump FieF 0.41 CSW01_07895 class II fumarate hydratase low > 62
Shewanella amazonensis SB2B 0.44 Sama_3430 cation efflux family protein (RefSeq) 0.40 Sama_0822 fumarate hydratase (RefSeq) low > 62
Magnetospirillum magneticum AMB-1 0.43 AMB_RS04510 ferrous iron transporter 0.67 AMB_RS18480 class II fumarate hydratase low > 64
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_4333 Cation efflux protein 0.57 Psyr_3661 Fumarate hydratase, class II low > 86
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_1393 Cobalt-zinc-cadmium resistance protein 0.56 PfGW456L13_2160 Fumarate hydratase class II (EC 4.2.1.2) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_4333 Cation efflux protein 0.57 Psyr_3661 Fumarate hydratase, class II low > 86
Pseudomonas simiae WCS417 0.41 PS417_24560 ferrous iron transporter 0.57 PS417_19200 fumarate hydratase low > 88
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS26490 cation diffusion facilitator family transporter 0.55 PFLU_RS21170 class II fumarate hydratase low > 109
Pseudomonas fluorescens SBW25 0.41 PFLU_RS26490 cation diffusion facilitator family transporter 0.55 PFLU_RS21170 class II fumarate hydratase low > 109
Pseudomonas stutzeri RCH2 0.41 Psest_0573 cation diffusion facilitator family transporter 0.55 Psest_2682 fumarate hydratase, class II low > 67
Pseudomonas fluorescens FW300-N2C3 0.41 AO356_15475 ferrous iron transporter 0.56 AO356_03545 fumarate hydratase
Pseudomonas putida KT2440 0.40 PP_4774 divalent cation efflux transporter 0.56 PP_1755 fumarate hydratase (class 2) low > 96
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_5036 Cobalt-zinc-cadmium resistance protein 0.55 Pf6N2E2_2536 Fumarate hydratase class II (EC 4.2.1.2) low > 103
Pseudomonas sp. S08-1 0.40 OH686_08810 Ferrous-iron efflux pump FieF 0.55 OH686_21015 fumarate hydratase, class II low > 80
Rhodospirillum rubrum S1H 0.39 Rru_A2628 Cation efflux protein (NCBI) 0.54 Rru_A2129 Fumarate hydratase, class II (NCBI) low > 58
Pseudomonas sp. RS175 0.39 PFR28_03835 Ferrous-iron efflux pump FieF 0.55 PFR28_00889 Fumarate hydratase class II low > 88
Shewanella loihica PV-4 0.39 Shew_3568 cation diffusion facilitator family transporter (RefSeq) 0.36 Shew_0068 fumarate lyase (RefSeq) low > 60
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_2726 Cobalt-zinc-cadmium resistance protein 0.56 Pf1N1B4_367 Fumarate hydratase class II (EC 4.2.1.2) low > 87
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_06310 ferrous iron transporter 0.58 AO353_02150 fumarate hydratase low > 101
Azospirillum sp. SherDot2 0.37 MPMX19_00714 Ferrous-iron efflux pump FieF 0.59 MPMX19_01424 Fumarate hydratase class II low > 112
Sphingomonas koreensis DSMZ 15582 0.35 Ga0059261_1887 cation diffusion facilitator family transporter 0.51 Ga0059261_1040 fumarase, class II (EC 4.2.1.2) low > 68
Rahnella sp. WP5 0.32 EX31_RS10790 cation diffusion facilitator family transporter 0.87 EX31_RS06965 class II fumarate hydratase low > 89
Caulobacter crescentus NA1000 0.31 CCNA_03756 cation efflux family transporter 0.54 CCNA_02194 fumarate hydratase
Caulobacter crescentus NA1000 Δfur 0.31 CCNA_03756 cation efflux family transporter 0.54 CCNA_02194 fumarate hydratase
Brevundimonas sp. GW460-12-10-14-LB2 0.29 A4249_RS11365 cation diffusion facilitator family transporter 0.56 A4249_RS05005 class II fumarate hydratase
Agrobacterium fabrum C58 0.27 Atu2274 cation efflux system protein 0.54 Atu1616 fumarate hydratase
Phaeobacter inhibens DSM 17395 0.25 PGA1_c01130 putative cation efflux pump 0.56 PGA1_c13520 fumarate hydratase class II
Sinorhizobium meliloti 1021 0.23 SMc02724 hypothetical protein 0.57 SMc00149 fumarate hydratase
Dechlorosoma suillum PS 0.21 Dsui_0813 cation diffusion facilitator family transporter 0.65 Dsui_0926 fumarate hydratase, class II low > 51
Acidovorax sp. GW101-3H11 0.20 Ac3H11_4676 Cobalt-zinc-cadmium resistance protein 0.73 Ac3H11_943 Fumarate hydratase class II (EC 4.2.1.2) low > 79
Variovorax sp. SCN45 0.19 GFF2069 Cobalt-zinc-cadmium resistance protein 0.71 GFF479 Fumarate hydratase class II (EC 4.2.1.2) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.19 GFF1671 Cobalt-zinc-cadmium resistance protein 0.71 GFF4101 Fumarate hydratase class II (EC 4.2.1.2) low > 90
Cupriavidus basilensis FW507-4G11 0.18 RR42_RS30535 cobalt transporter 0.55 RR42_RS33090 fumarate hydratase low > 128
Herbaspirillum seropedicae SmR1 0.18 HSERO_RS02620 cobalt transporter 0.69 HSERO_RS07610 fumarate hydratase 0.46 68
Variovorax sp. OAS795 0.17 ABID97_RS24945 cation diffusion facilitator family transporter 0.71 ABID97_RS17545 class II fumarate hydratase 0.38 42
Synechococcus elongatus PCC 7942 0.17 Synpcc7942_1989 cation diffusion facilitator family transporter 0.55 Synpcc7942_1007 fumC fumarate hydratase low > 38
Echinicola vietnamensis KMM 6221, DSM 17526 0.16 Echvi_4463 cation diffusion facilitator family transporter 0.60 Echvi_1329 fumarate hydratase, class II
Castellaniella sp019104865 MT123 0.16 ABCV34_RS08935 cation diffusion facilitator family transporter 0.58 ABCV34_RS03655 class II fumarate hydratase low > 48
Pedobacter sp. GW460-11-11-14-LB5 0.16 CA265_RS07520 cation diffusion facilitator family transporter 0.57 CA265_RS23855 fumarate hydratase, class II
Pontibacter actiniarum KMM 6156, DSM 19842 0.15 CA264_04200 cation-efflux pump 0.61 CA264_17145 class II fumarate hydratase
Mucilaginibacter yixingensis YX-36 DSM 26809 0.15 ABZR88_RS06065 cation diffusion facilitator family transporter 0.59 ABZR88_RS20230 class II fumarate hydratase
Acinetobacter radioresistens SK82 0.12 MPMX26_00334 Ferrous-iron efflux pump FieF 0.60 MPMX26_01446 Fumarate hydratase class II low > 36
Mycobacterium tuberculosis H37Rv 0.11 Rv2025c Conserved membrane protein 0.42 Rv1098c Probable fumarase Fum (fumarate hydratase)
Lysobacter sp. OAE881 0.10 ABIE51_RS09615 cation diffusion facilitator family transporter 0.40 ABIE51_RS09015 class II fumarate hydratase low > 62

Not shown: 10 genomes with orthologs for DDA3937_RS00840 only; 24 genomes with orthologs for DDA3937_RS10655 only