Conservation of cofitness between CSW01_06950 and CSW01_17495 in Vibrio cholerae E7946 ATCC 55056

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06950 ATP-dependent RNA helicase HrpA 1.0 CSW01_17495 glycerol-3-phosphate dehydrogenase 0.68 11
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.72 GFF2632 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) 0.51 GFF587 Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_02301 hypothetical protein 0.52 OHPLBJKB_00278 Aerobic glycerol-3-phosphate dehydrogenase 0.62 58
Escherichia coli ECRC98 0.71 JDDGAC_04220 hrpA ATP-dependent RNA helicase HrpA 0.52 JDDGAC_20555 glpD glycerol-3-phosphate dehydrogenase low > 87
Escherichia coli ECRC101 0.71 MCAODC_16205 hrpA ATP-dependent RNA helicase HrpA 0.52 MCAODC_07455 glpD glycerol-3-phosphate dehydrogenase 0.38 39
Enterobacter sp. TBS_079 0.71 MPMX20_02189 hypothetical protein 0.51 MPMX20_04309 Aerobic glycerol-3-phosphate dehydrogenase low > 85
Enterobacter asburiae PDN3 0.71 EX28DRAFT_1357 RNA helicase HrpA 0.52 EX28DRAFT_4120 Glycerol-3-phosphate dehydrogenase low > 76
Escherichia coli ECRC99 0.71 KEDOAH_26710 hrpA ATP-dependent RNA helicase HrpA 0.52 KEDOAH_11215 glpD glycerol-3-phosphate dehydrogenase — —
Escherichia coli ECRC100 0.71 OKFHMN_01730 hrpA ATP-dependent RNA helicase HrpA 0.52 OKFHMN_16925 glpD glycerol-3-phosphate dehydrogenase 0.73 19
Escherichia coli ECRC102 0.71 NIAGMN_25865 hrpA ATP-dependent RNA helicase HrpA 0.52 NIAGMN_14695 glpD glycerol-3-phosphate dehydrogenase low > 80
Escherichia coli ECOR27 0.71 NOLOHH_19390 hrpA ATP-dependent RNA helicase HrpA 0.52 NOLOHH_08720 glpD glycerol-3-phosphate dehydrogenase low > 76
Escherichia coli BL21 0.71 ECD_01368 putative ATP-dependent helicase 0.52 ECD_03277 sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding low > 61
Escherichia coli BW25113 0.71 b1413 hrpA ATP-dependent helicase (RefSeq) 0.52 b3426 glpD sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) low > 76
Escherichia coli ECRC62 0.71 BNILDI_17845 hrpA ATP-dependent RNA helicase HrpA 0.52 BNILDI_02795 glpD glycerol-3-phosphate dehydrogenase low > 75
Escherichia coli Nissle 1917 0.71 ECOLIN_RS08180 ATP-dependent RNA helicase HrpA 0.52 ECOLIN_RS19555 glycerol-3-phosphate dehydrogenase — —
Escherichia fergusonii Becca 0.71 EFB2_02565 hypothetical protein 0.52 EFB2_00403 Aerobic glycerol-3-phosphate dehydrogenase low > 86
Klebsiella pneumoniae MKP103 0.71 KDGMDA_20775 ATP-dependent RNA helicase HrpA 0.51 KDGMDA_07065 glycerol-3-phosphate dehydrogenase low > 95
Escherichia coli ECOR38 0.71 HEPCGN_26110 hrpA ATP-dependent RNA helicase HrpA 0.52 HEPCGN_15745 glpD glycerol-3-phosphate dehydrogenase low > 88
Klebsiella michiganensis M5al 0.70 BWI76_RS13165 ATP-dependent RNA helicase HrpA 0.50 BWI76_RS26190 glycerol-3-phosphate dehydrogenase low > 92
Pantoea sp. MT58 0.70 IAI47_09520 ATP-dependent RNA helicase HrpA 0.52 IAI47_01750 glycerol-3-phosphate dehydrogenase low > 76
Serratia liquefaciens MT49 0.70 IAI46_13330 ATP-dependent RNA helicase HrpA 0.51 IAI46_23915 glycerol-3-phosphate dehydrogenase low > 86
Pantoea agglomerans CFBP13505 P0401 0.70 PagCFBP13505_RS06635 ATP-dependent RNA helicase HrpA 0.52 PagCFBP13505_RS18265 glycerol-3-phosphate dehydrogenase — —
Rahnella sp. WP5 0.70 EX31_RS06495 ATP-dependent RNA helicase HrpA 0.53 EX31_RS05000 glycerol-3-phosphate dehydrogenase low > 89
Pectobacterium carotovorum WPP14 0.69 HER17_RS09660 ATP-dependent RNA helicase HrpA 0.52 HER17_RS01510 glycerol-3-phosphate dehydrogenase — —
Dickeya dadantii 3937 0.69 DDA3937_RS12270 ATP-dependent RNA helicase HrpA 0.51 DDA3937_RS19720 glycerol-3-phosphate dehydrogenase — —
Erwinia amylovora T8 0.69 OLJFJH_13820 ATP-dependent RNA helicase HrpA 0.51 OLJFJH_04225 glycerol-3-phosphate dehydrogenase — —
Dickeya dianthicola ME23 0.69 DZA65_RS12800 ATP-dependent RNA helicase HrpA 0.51 DZA65_RS20905 glycerol-3-phosphate dehydrogenase low > 75
Erwinia tracheiphila HP pepo 2.2 0.69 IJEDHG_23640 hrpA ATP-dependent RNA helicase HrpA 0.51 IJEDHG_11865 glpD glycerol-3-phosphate dehydrogenase — —
Erwinia tracheiphila SCR3 0.69 LU632_RS12630 hrpA ATP-dependent RNA helicase HrpA 0.50 LU632_RS23020 glpD glycerol-3-phosphate dehydrogenase — —
Dickeya dianthicola 67-19 0.69 HGI48_RS12360 ATP-dependent RNA helicase HrpA 0.51 HGI48_RS19815 glycerol-3-phosphate dehydrogenase low > 71
Alteromonas macleodii MIT1002 0.55 MIT1002_01685 ATP-dependent RNA helicase HrpB 0.46 MIT1002_00200 Aerobic glycerol-3-phosphate dehydrogenase — —
Pseudomonas aeruginosa PA14 0.45 IKLFDK_16885 ATP-dependent RNA helicase HrpA 0.53 IKLFDK_18300 glycerol-3-phosphate dehydrogenase — —
Pseudomonas sp. SVBP6 0.45 COO64_RS22000 hrpA ATP-dependent RNA helicase HrpA 0.55 COO64_RS16790 glpD glycerol-3-phosphate dehydrogenase — —
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_4467 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) 0.54 PfGW456L13_1732 Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) — —
Pseudomonas sp. DMC3 0.45 GFF2341 hypothetical protein 0.54 GFF5109 Aerobic glycerol-3-phosphate dehydrogenase — —
Pseudomonas fluorescens FW300-N2E3 0.45 AO353_18225 ATP-dependent RNA helicase HrpA 0.54 AO353_04190 glycerol-3-phosphate dehydrogenase low > 101
Pseudomonas lactucae CFBP13502 0.45 GEMAOFIL_04265 hypothetical protein 0.53 GEMAOFIL_01300 Aerobic glycerol-3-phosphate dehydrogenase — —
Pseudomonas fluorescens FW300-N1B4 0.45 Pf1N1B4_3388 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) 0.54 Pf1N1B4_769 Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) low > 87
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_2694 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) 0.53 Pf6N2E2_5572 Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) — —
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_04280 ATP-dependent RNA helicase HrpA 0.53 AO356_18235 glycerol-3-phosphate dehydrogenase — —
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS22265 ATP-dependent RNA helicase HrpA 0.52 PFLU_RS05650 glycerol-3-phosphate dehydrogenase — —
Pseudomonas fluorescens SBW25 0.45 PFLU_RS22265 ATP-dependent RNA helicase HrpA 0.52 PFLU_RS05650 glycerol-3-phosphate dehydrogenase low > 109
Pseudomonas simiae WCS417 0.44 PS417_20575 ATP-dependent helicase HrpA 0.53 PS417_05565 glycerol-3-phosphate dehydrogenase — —
Pseudomonas sp. RS175 0.44 PFR28_00739 hypothetical protein 0.54 PFR28_03370 Aerobic glycerol-3-phosphate dehydrogenase — —
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_3831 ATP-dependent helicase HrpA 0.54 Psyr_3907 homodimeric glycerol 3-phosphate dehydrogenase (quinone) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_3831 ATP-dependent helicase HrpA 0.54 Psyr_3907 homodimeric glycerol 3-phosphate dehydrogenase (quinone) — —
Pseudomonas putida KT2440 0.44 PP_4546 ATP-dependent helicase HrpA 0.53 PP_1073 glycerol-3-phosphate dehydrogenase (aerobic) — —
Marinobacter adhaerens HP15 0.44 HP15_1863 RNA helicase, ATP-dependent DEAH box, HrpA type 0.48 HP15_2168 FAD dependent oxidoreductase — —
Pseudomonas sp. BP01 0.44 JOY50_RS01295 hrpA ATP-dependent RNA helicase HrpA 0.53 JOY50_RS14860 glpD glycerol-3-phosphate dehydrogenase low > 84
Pseudomonas sp. S08-1 0.43 OH686_05730 RNA helicase HrpA 0.53 OH686_20360 Aerobic glycerol-3-phosphate dehydrogenase — —
Pseudomonas segetis P6 0.43 MPMX49_03273 hypothetical protein 0.53 MPMX49_01429 Aerobic glycerol-3-phosphate dehydrogenase low > 75
Pseudomonas stutzeri RCH2 0.43 Psest_1339 ATP-dependent helicase HrpA 0.53 Psest_2775 Glycerol-3-phosphate dehydrogenase low > 67
Cupriavidus basilensis FW507-4G11 0.41 RR42_RS13030 ATP-dependent helicase 0.16 RR42_RS13815 FAD-dependent oxidoreductase — —
Ralstonia solanacearum PSI07 0.41 RPSI07_RS17865 ATP-dependent RNA helicase HrpA 0.42 RPSI07_RS09885 glycerol-3-phosphate dehydrogenase low > 81
Ralstonia solanacearum GMI1000 0.41 RS_RS06270 ATP-dependent RNA helicase HrpA 0.42 RS_RS15300 glycerol-3-phosphate dehydrogenase low > 80
Ralstonia solanacearum UW163 0.41 UW163_RS12950 ATP-dependent RNA helicase HrpA 0.42 UW163_RS06260 glycerol-3-phosphate dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.41 RALBFv3_RS15490 ATP-dependent RNA helicase HrpA 0.42 RALBFv3_RS07360 glycerol-3-phosphate dehydrogenase low > 76
Ralstonia sp. UNC404CL21Col 0.40 ABZR87_RS11020 ATP-dependent RNA helicase HrpA 0.41 ABZR87_RS03020 glycerol-3-phosphate dehydrogenase low > 80
Paraburkholderia graminis OAS925 0.40 ABIE53_002813 ATP-dependent helicase HrpA 0.41 ABIE53_003468 glycerol-3-phosphate dehydrogenase low > 113
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS17315 ATP-dependent helicase 0.43 HSERO_RS04840 glycerol-3-phosphate dehydrogenase — —
Variovorax sp. OAS795 0.39 ABID97_RS16615 ATP-dependent RNA helicase HrpA 0.40 ABID97_RS19955 glycerol-3-phosphate dehydrogenase low > 91
Castellaniella sp019104865 MT123 0.39 ABCV34_RS02420 ATP-dependent RNA helicase HrpA 0.17 ABCV34_RS05860 glycerol-3-phosphate dehydrogenase/oxidase — —
Variovorax sp. SCN45 0.39 GFF247 ATP-dependent helicase HrpA 0.41 GFF2677 Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) low > 127
Acidovorax sp. GW101-3H11 0.38 Ac3H11_896 macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif. 0.17 Ac3H11_797 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) — —
Dyella japonica UNC79MFTsu3.2 0.37 ABZR86_RS19720 ATP-dependent RNA helicase HrpA 0.44 ABZR86_RS20025 glycerol-3-phosphate dehydrogenase low > 74
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS05625 ATP-dependent RNA helicase HrpA 0.41 QEN71_RS02235 glycerol-3-phosphate dehydrogenase — —
Burkholderia phytofirmans PsJN 0.36 BPHYT_RS12980 ATP-dependent helicase 0.41 BPHYT_RS16490 glycerol-3-phosphate dehydrogenase low > 109
Acinetobacter baumannii LAC-4 0.35 RR41_RS10175 ATP-dependent RNA helicase HrpA 0.52 RR41_RS04250 glycerol-3-phosphate dehydrogenase — —
Rhodanobacter denitrificans MT42 0.34 LRK55_RS12420 ATP-dependent RNA helicase HrpA 0.16 LRK55_RS15125 glycerol-3-phosphate dehydrogenase/oxidase low > 63
Rhodanobacter denitrificans FW104-10B01 0.34 LRK54_RS12715 ATP-dependent RNA helicase HrpA 0.16 LRK54_RS15405 glycerol-3-phosphate dehydrogenase/oxidase low > 59

Not shown: 12 genomes with orthologs for CSW01_06950 only; 17 genomes with orthologs for CSW01_17495 only