Conservation of cofitness between CSW01_14665 and CSW01_17325 in Vibrio cholerae E7946 ATCC 55056

71 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_14665 ribokinase 1.0 CSW01_17325 transaldolase 0.78 20
Serratia liquefaciens MT49 0.53 IAI46_25055 ribokinase 0.75 IAI46_03055 transaldolase low > 87
Escherichia coli BL21 0.52 ECD_03638 ribokinase 0.75 ECD_00008 transaldolase B low > 61
Escherichia fergusonii Becca 0.52 EFB2_04881 Ribokinase 0.75 EFB2_04035 Transaldolase B low > 86
Escherichia coli Nissle 1917 0.52 ECOLIN_RS21570 ribokinase 0.75 ECOLIN_RS00045 transaldolase low > 55
Escherichia coli ECRC99 0.52 KEDOAH_13420 rbsK ribokinase 0.75 KEDOAH_17075 transaldolase B — —
Escherichia coli ECRC98 0.52 JDDGAC_18350 rbsK ribokinase 0.75 JDDGAC_14675 transaldolase B low > 87
Escherichia coli ECRC100 0.52 OKFHMN_14730 rbsK ribokinase 0.75 OKFHMN_11080 transaldolase B low > 79
Escherichia coli ECRC102 0.52 NIAGMN_12485 rbsK ribokinase 0.75 NIAGMN_08930 transaldolase B low > 80
Escherichia coli ECRC101 0.52 MCAODC_05235 rbsK ribokinase 0.75 MCAODC_01595 transaldolase B low > 87
Escherichia coli ECOR27 0.52 NOLOHH_06865 rbsK ribokinase 0.75 NOLOHH_03410 transaldolase B low > 76
Escherichia coli BW25113 0.52 b3752 rbsK ribokinase (NCBI) 0.75 b0008 talB transaldolase B (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_04301 Ribokinase 0.75 OHPLBJKB_03652 Transaldolase low > 74
Escherichia coli ECRC62 0.52 BNILDI_04660 rbsK ribokinase 0.75 BNILDI_08195 transaldolase B 0.68 69
Escherichia coli ECOR38 0.52 HEPCGN_13440 rbsK ribokinase 0.75 HEPCGN_09085 transaldolase B low > 88
Pantoea sp. MT58 0.52 IAI47_00370 ribokinase 0.76 IAI47_16195 transaldolase low > 76
Pectobacterium carotovorum WPP14 0.52 HER17_RS21530 ribokinase 0.75 HER17_RS02815 transaldolase 0.82 69
Rahnella sp. WP5 0.52 EX31_RS06190 ribokinase 0.75 EX31_RS03920 transaldolase low > 89
Pantoea agglomerans CFBP13505 P0401 0.51 PagCFBP13505_RS18965 ribokinase 0.76 PagCFBP13505_RS21910 transaldolase low > 74
Klebsiella michiganensis M5al 0.51 BWI76_RS00290 Ribokinase (EC 2.7.1.15) (from data) 0.74 BWI76_RS04270 transaldolase low > 92
Erwinia amylovora T8 0.51 OLJFJH_05410 ribokinase 0.74 OLJFJH_01475 transaldolase B low > 58
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF1705 Ribokinase (EC 2.7.1.15) 0.74 GFF1083 Transaldolase (EC 2.2.1.2) low > 78
Dickeya dadantii 3937 0.51 DDA3937_RS00050 ribokinase 0.74 DDA3937_RS18395 transaldolase low > 74
Dickeya dianthicola 67-19 0.51 HGI48_RS21315 ribokinase 0.73 HGI48_RS18325 transaldolase low > 71
Dickeya dianthicola ME23 0.50 DZA65_RS22295 ribokinase 0.74 DZA65_RS19465 transaldolase low > 75
Klebsiella pneumoniae MKP103 0.50 KDGMDA_08895 ribokinase 0.74 KDGMDA_12540 transaldolase B low > 95
Enterobacter sp. TBS_079 0.49 MPMX20_04615 Ribokinase 0.75 MPMX20_00716 Transaldolase B low > 85
Enterobacter asburiae PDN3 0.49 EX28DRAFT_4028 ribokinase 0.75 EX28DRAFT_3620 transaldolase low > 76
Shewanella sp. ANA-3 0.43 Shewana3_3477 ribokinase (RefSeq) 0.71 Shewana3_3147 transaldolase B (RefSeq) — —
Shewanella loihica PV-4 0.42 Shew_0696 ribokinase (RefSeq) 0.69 Shew_1089 transaldolase B (RefSeq) — —
Shewanella oneidensis MR-1 0.41 SO0810 rbsK ribokinase (NCBI ptt file) 0.72 SO3546 tal transaldolase (NCBI ptt file) — —
Burkholderia phytofirmans PsJN 0.40 BPHYT_RS20695 ribokinase 0.49 BPHYT_RS06045 transaldolase low > 109
Pseudomonas aeruginosa MRSN321 0.39 DY961_RS28765 rbsK;go_function=ribokinase ribokinase 0.58 DY961_RS03070 tal;go_function=transaldolase transaldolase low > 100
Pseudomonas aeruginosa PUPa3 0.39 DQ20_RS38250 rbsK;go_function=ribokinase ribokinase 0.58 DQ20_RS32520 tal;go_function=transaldolase transaldolase low > 101
Pseudomonas aeruginosa PA14 0.39 IKLFDK_09520 ribokinase 0.58 IKLFDK_14150 transaldolase — —
Ralstonia solanacearum GMI1000 0.38 RS_RS05015 ribokinase 0.53 RS_RS06170 transaldolase low > 80
Ralstonia solanacearum PSI07 0.37 RPSI07_RS19230 ribokinase 0.53 RPSI07_RS18015 transaldolase low > 81
Ralstonia solanacearum IBSBF1503 0.37 RALBFv3_RS14235 ribokinase 0.53 RALBFv3_RS15360 transaldolase — —
Ralstonia solanacearum UW163 0.37 UW163_RS11700 ribokinase 0.53 UW163_RS12825 transaldolase — —
Pseudomonas syringae pv. syringae B728a 0.37 Psyr_2155 Carbohydrate kinase, PfkB 0.58 Psyr_1914 transaldolase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.37 Psyr_2155 Carbohydrate kinase, PfkB 0.58 Psyr_1914 transaldolase low > 86
Ralstonia sp. UNC404CL21Col 0.37 ABZR87_RS09950 ribokinase 0.54 ABZR87_RS11000 transaldolase low > 80
Pseudomonas simiae WCS417 0.36 PS417_18385 ribokinase 0.60 PS417_07730 transaldolase — —
Paraburkholderia sabiae LMG 24235 0.36 QEN71_RS35905 ribokinase 0.49 QEN71_RS24595 transaldolase low > 153
Dyella japonica UNC79MFTsu3.2 0.35 ABZR86_RS15070 ribokinase 0.63 ABZR86_RS12545 transaldolase low > 74
Pseudomonas sp. DMC3 0.35 GFF901 Ribokinase 0.55 GFF1304 Transaldolase B low > 89
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_00950 Ribokinase (EC 2.7.1.15) (from data) 0.56 AO356_02175 transaldolase 0.20 35
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_165 Ribokinase (EC 2.7.1.15) 0.56 Pf6N2E2_2258 Transaldolase (EC 2.2.1.2) low > 103
Pseudomonas fluorescens GW456-L13 0.35 PfGW456L13_3908 Ribokinase (EC 2.7.1.15) 0.57 PfGW456L13_4009 Transaldolase (EC 2.2.1.2) low > 87
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_6031 Ribokinase (EC 2.7.1.15) (from data) 0.55 Pf1N1B4_58 Transaldolase (EC 2.2.1.2) low > 87
Pseudomonas sp. RS175 0.34 PFR28_02733 Ribokinase 0.56 PFR28_01142 Transaldolase 0.32 43
Pseudomonas lactucae CFBP13502 0.34 GEMAOFIL_03907 Ribokinase 0.60 GEMAOFIL_01678 Transaldolase low > 96
Pseudomonas putida KT2440 0.34 PP_2458 ribokinase 0.59 PP_2168 Transaldolase low > 96
Herbaspirillum seropedicae SmR1 0.34 HSERO_RS11500 Ribokinase (EC 2.7.1.15) (from data) 0.53 HSERO_RS05500 transaldolase 0.37 9
Pseudomonas orientalis W4I3 0.34 QF045_RS20535 ribokinase 0.61 QF045_RS10375 transaldolase low > 93
Pseudomonas sp. SVBP6 0.34 COO64_RS10345 rbsK ribokinase 0.62 COO64_RS09560 tal transaldolase low > 93
Pseudomonas sp. BP01 0.33 JOY50_RS04290 rbsK ribokinase 0.59 JOY50_RS25200 tal transaldolase low > 84
Paraburkholderia bryophila 376MFSha3.1 0.33 H281DRAFT_05229 ribokinase 0.49 H281DRAFT_00286 transaldolase low > 103
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS20360 ribokinase 0.60 PFLU_RS07805 transaldolase 0.43 14
Pseudomonas fluorescens SBW25 0.33 PFLU_RS20360 ribokinase 0.60 PFLU_RS07805 transaldolase low > 109
Variovorax sp. SCN45 0.32 GFF2136 Ribokinase (EC 2.7.1.15) 0.48 GFF5266 Transaldolase (EC 2.2.1.2) low > 127
Variovorax sp. OAS795 0.32 ABID97_RS24775 ribokinase 0.48 ABID97_RS07095 transaldolase — —
Rhodospirillum rubrum S1H 0.32 Rru_A2297 Ribokinase (NCBI) 0.48 Rru_A1357 Transaldolase AB (NCBI) low > 58
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_20835 Ribokinase (EC 2.7.1.15) (from data) 0.58 AO353_00310 transaldolase low > 101
Paraburkholderia graminis OAS925 0.32 ABIE53_002321 ribokinase 0.49 ABIE53_001416 transaldolase 0.17 101
Acidovorax sp. GW101-3H11 0.31 Ac3H11_1839 Ribokinase (EC 2.7.1.15) 0.52 Ac3H11_2059 Transaldolase (EC 2.2.1.2) 0.23 14
Alteromonas macleodii MIT1002 0.30 MIT1002_02988 Ribokinase 0.69 MIT1002_03080 Transaldolase B — —
Agrobacterium fabrum C58 0.27 Atu4847 ribokinase 0.53 Atu4464 transaldolase B — —
Lysobacter sp. OAE881 0.25 ABIE51_RS16435 ribokinase 0.61 ABIE51_RS02125 transaldolase 0.42 9
Rhizobium sp. OAE497 0.23 ABIE40_RS01880 ribokinase 0.56 ABIE40_RS16940 transaldolase — —
Xanthomonas campestris pv. campestris strain 8004 0.23 Xcc-8004.4302.1 Ribokinase (EC 2.7.1.15) 0.48 Xcc-8004.4226.1 Transaldolase (EC 2.2.1.2) low > 74
Bosea sp. OAE506 0.22 ABIE41_RS03745 ribokinase 0.52 ABIE41_RS23900 transaldolase low > 77

Not shown: 24 genomes with orthologs for CSW01_14665 only; 15 genomes with orthologs for CSW01_17325 only