Conservation of cofitness between CSW01_13700 and CSW01_17150 in Vibrio cholerae E7946 ATCC 55056

72 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_13700 transcription elongation factor GreB 1.0 CSW01_17150 thiol:disulfide oxidoreductase 0.40 12
Pectobacterium carotovorum WPP14 0.80 HER17_RS01650 transcription elongation factor GreB 0.41 HER17_RS07060 GSH-dependent disulfide bond oxidoreductase low > 75
Dickeya dadantii 3937 0.74 DDA3937_RS19625 transcription elongation factor GreB 0.44 DDA3937_RS14400 GSH-dependent disulfide bond oxidoreductase low > 74
Dickeya dianthicola ME23 0.74 DZA65_RS20845 transcription elongation factor GreB 0.43 DZA65_RS15300 GSH-dependent disulfide bond oxidoreductase low > 75
Erwinia tracheiphila HP pepo 2.2 0.73 IJEDHG_11950 greB transcription elongation factor GreB 0.34 IJEDHG_04875 Disulfide-bond oxidoreductase YghU — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_2065 transcription elongation factor GreB 0.37 Psyr_0609 Glutathione S-transferase, C-terminal low > 86
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_2065 transcription elongation factor GreB 0.37 Psyr_0609 Glutathione S-transferase, C-terminal low > 86
Klebsiella pneumoniae MRSN742743 0.72 GJGHJB_00339 greB transcription elongation factor GreB 0.39 GJGHJB_01475 yfcG GSH-dependent disulfide bond oxidoreductase low > 83
Klebsiella pneumoniae MKP103 0.72 KDGMDA_06985 transcription elongation factor GreB 0.39 KDGMDA_27135 GSH-dependent disulfide bond oxidoreductase low > 94
Serratia liquefaciens MT49 0.72 IAI46_23795 transcription elongation factor GreB 0.43 IAI46_17770 GSH-dependent disulfide bond oxidoreductase low > 87
Rahnella sp. WP5 0.71 EX31_RS04835 transcription elongation factor GreB 0.43 EX31_RS19525 GSH-dependent disulfide bond oxidoreductase low > 89
Klebsiella michiganensis M5al 0.71 BWI76_RS26660 transcription elongation factor GreB 0.41 BWI76_RS20290 thiol:disulfide oxidoreductase low > 92
Escherichia coli BW25113 0.71 b3406 greB transcription elongation factor GreB (NCBI) 0.39 b2302 yfcG predicted glutathione S-transferase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_00297 Transcription elongation factor GreB 0.39 OHPLBJKB_01403 Disulfide-bond oxidoreductase YfcG low > 74
Pseudomonas protegens RBAN4 0.71 FABNJH_22115 greB transcription elongation factor GreB 0.66 FABNJH_09065 Glutathione S-transferase — —
Escherichia coli ECRC100 0.71 OKFHMN_17030 greB transcription elongation factor GreB 0.40 OKFHMN_22765 yfcG GSH-dependent disulfide bond oxidoreductase low > 79
Escherichia coli ECOR27 0.71 NOLOHH_08820 greB transcription elongation factor GreB 0.39 NOLOHH_14385 yfcG GSH-dependent disulfide bond oxidoreductase low > 75
Escherichia coli ECRC99 0.71 KEDOAH_11110 greB transcription elongation factor GreB 0.40 KEDOAH_05430 yfcG GSH-dependent disulfide bond oxidoreductase — —
Escherichia coli ECRC101 0.71 MCAODC_07560 greB transcription elongation factor GreB 0.40 MCAODC_13805 yfcG GSH-dependent disulfide bond oxidoreductase low > 87
Escherichia fergusonii Becca 0.71 EFB2_00422 Transcription elongation factor GreB 0.40 EFB2_01556 Disulfide-bond oxidoreductase YfcG low > 86
Escherichia coli ECRC102 0.71 NIAGMN_14800 greB transcription elongation factor GreB 0.40 NIAGMN_20535 yfcG GSH-dependent disulfide bond oxidoreductase low > 80
Escherichia coli BL21 0.71 ECD_03258 transcript cleavage factor 0.39 ECD_02227 GSH-dependent disulfide bond oxidoreductase low > 61
Escherichia coli ECOR38 0.71 HEPCGN_15840 greB transcription elongation factor GreB 0.40 HEPCGN_21970 yfcG GSH-dependent disulfide bond oxidoreductase low > 88
Escherichia coli Nissle 1917 0.71 ECOLIN_RS19460 transcription elongation factor GreB 0.40 ECOLIN_RS13360 GSH-dependent disulfide bond oxidoreductase — —
Escherichia coli ECRC62 0.71 BNILDI_02700 greB transcription elongation factor GreB 0.39 BNILDI_13305 yfcG GSH-dependent disulfide bond oxidoreductase 0.72 73
Escherichia coli ECRC98 0.71 JDDGAC_20660 greB transcription elongation factor GreB 0.40 JDDGAC_26730 yfcG GSH-dependent disulfide bond oxidoreductase low > 87
Alteromonas macleodii MIT1002 0.70 MIT1002_04011 Transcript cleavage factor GreB 0.60 MIT1002_03773 Disulfide-bond oxidoreductase YfcG low > 70
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF612 Transcription elongation factor GreB 0.41 GFF1913 Probable glutathione S-transferase (EC 2.5.1.18), YfcG homolog low > 78
Enterobacter sp. TBS_079 0.70 MPMX20_04293 Transcription elongation factor GreB 0.41 MPMX20_03237 Disulfide-bond oxidoreductase YfcG low > 85
Enterobacter asburiae PDN3 0.70 EX28DRAFT_4137 transcription elongation factor GreB 0.42 EX28DRAFT_0302 Glutathione S-transferase low > 76
Acinetobacter baumannii LAC-4 0.70 RR41_RS04330 transcription elongation factor GreB 0.47 RR41_RS16010 glutathione S-transferase N-terminal domain-containing protein low > 55
Pseudomonas sp. BP01 0.69 JOY50_RS25840 greB transcription elongation factor GreB 0.37 JOY50_RS06895 glutathione S-transferase N-terminal domain-containing protein 0.36 82
Acinetobacter radioresistens SK82 0.69 MPMX26_00813 Transcription elongation factor GreB 0.45 MPMX26_00556 Disulfide-bond oxidoreductase YfcG — —
Pseudomonas simiae WCS417 0.69 PS417_08390 transcription elongation factor GreB 0.46 PS417_06435 glutathione S-transferase low > 88
Pseudomonas sp. SVBP6 0.69 COO64_RS09765 greB transcription elongation factor GreB 0.37 COO64_RS21490 glutathione S-transferase family protein low > 91
Pseudomonas fluorescens FW300-N1B4 0.68 Pf1N1B4_298 Transcription elongation factor GreB 0.66 Pf1N1B4_3526 Glutathione S-transferase (EC 2.5.1.18) low > 87
Pseudomonas lactucae CFBP13502 0.68 GEMAOFIL_01811 Transcription elongation factor GreB 0.39 GEMAOFIL_02186 Disulfide-bond oxidoreductase YfcG low > 96
Pseudomonas orientalis W4I3 0.68 QF045_RS11110 transcription elongation factor GreB 0.39 QF045_RS12460 glutathione S-transferase N-terminal domain-containing protein low > 93
Pseudomonas fluorescens SBW25-INTG 0.68 PFLU_RS08340 transcription elongation factor GreB 0.46 PFLU_RS06500 thiol:disulfide oxidoreductase low > 109
Pseudomonas fluorescens SBW25 0.68 PFLU_RS08340 transcription elongation factor GreB 0.46 PFLU_RS06500 thiol:disulfide oxidoreductase low > 109
Shewanella amazonensis SB2B 0.65 Sama_3509 GreA/GreB family elongation factor (RefSeq) 0.77 Sama_1087 glutathione S-transferase family protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.64 Shewana3_4014 transcription elongation factor GreB (RefSeq) 0.81 Shewana3_2866 glutathione S-transferase domain-containing protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.63 SO4631 greB transcription elongation factor GreB (NCBI ptt file) 0.80 SO1576 glutathione S-transferase family protein (NCBI ptt file) low > 76
Pseudomonas segetis P6 0.51 ACVTMO_RS13185 greB transcription elongation factor GreB 0.69 ACVTMO_RS13290 glutathione S-transferase family protein low > 75
Pseudomonas aeruginosa PA14 0.50 IKLFDK_14525 transcription elongation factor GreB 0.69 IKLFDK_07780 glutathione S-transferase low > 98
Pseudomonas aeruginosa PUPa3 0.50 NPBIFN_02154 greB transcription elongation factor GreB 0.69 NPBIFN_03551 Glutathione S-transferase low > 101
Pseudomonas sp. S08-1 0.50 OH686_01805 transcription elongation factor GreB 0.66 OH686_01930 Glutathione S-transferase low > 80
Pseudomonas aeruginosa MRSN321 0.50 PFGADD_02114 greB transcription elongation factor GreB 0.69 PFGADD_03515 Glutathione S-transferase low > 99
Lysobacter sp. OAE881 0.50 ABIE51_RS08175 transcription elongation factor GreB 0.40 ABIE51_RS01970 glutathione S-transferase N-terminal domain-containing protein low > 62
Pseudomonas sp. DMC3 0.49 GFF4631 Transcription elongation factor GreB 0.38 GFF1387 Disulfide-bond oxidoreductase YfcG low > 89
Pseudomonas fluorescens GW456-L13 0.49 PfGW456L13_2216 Transcription elongation factor GreB 0.64 PfGW456L13_2053 Glutathione S-transferase (EC 2.5.1.18) low > 87
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_03240 transcription elongation factor GreB 0.41 AO356_01380 glutathione S-transferase low > 104
Pseudomonas fluorescens FW300-N2E3 0.49 AO353_18990 transcription elongation factor GreB 0.66 AO353_01700 glutathione S-transferase low > 101
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_2479 Transcription elongation factor GreB 0.41 Pf6N2E2_2148 Glutathione S-transferase (EC 2.5.1.18) low > 103
Pseudomonas sp. RS175 0.48 PFR28_00955 Transcription elongation factor GreB 0.40 PFR28_01289 Disulfide-bond oxidoreductase YfcG low > 88
Rhodanobacter sp. FW510-T8 0.48 OKGIIK_04765 greB transcription elongation factor GreB 0.38 OKGIIK_08260 gstA glutathione S-transferase low > 53
Rhodanobacter denitrificans MT42 0.48 LRK55_RS01545 transcription elongation factor GreB 0.37 LRK55_RS16250 glutathione S-transferase N-terminal domain-containing protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.47 LRK54_RS01765 transcription elongation factor GreB 0.38 LRK54_RS16525 glutathione S-transferase N-terminal domain-containing protein low > 59
Dyella japonica UNC79MFTsu3.2 0.47 ABZR86_RS08080 transcription elongation factor GreB 0.46 ABZR86_RS15060 glutathione S-transferase N-terminal domain-containing protein low > 74
Rhodanobacter sp000427505 FW510-R12 0.47 LRK53_RS08270 transcription elongation factor GreB 0.40 LRK53_RS12395 glutathione S-transferase N-terminal domain-containing protein low > 59
Xanthomonas campestris pv. campestris strain 8004 0.46 Xcc-8004.1941.1 Transcription elongation factor GreB 0.43 Xcc-8004.5030.1 Glutathione S-transferase (EC 2.5.1.18) 0.33 31
Ralstonia solanacearum UW163 0.38 UW163_RS10420 transcription elongation factor GreB 0.50 UW163_RS10940 thiol:disulfide oxidoreductase — —
Ralstonia solanacearum IBSBF1503 0.38 RALBFv3_RS03305 transcription elongation factor GreB 0.50 RALBFv3_RS02785 thiol:disulfide oxidoreductase low > 76
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS15215 transcription elongation factor GreB 0.48 ABZR87_RS14710 glutathione binding-like protein low > 80
Ralstonia solanacearum PSI07 0.38 RPSI07_RS13880 transcription elongation factor GreB 0.50 RPSI07_RS14525 thiol:disulfide oxidoreductase low > 81
Herbaspirillum seropedicae SmR1 0.38 HSERO_RS10615 transcription elongation factor GreB 0.52 HSERO_RS15120 glutathione S-transferase low > 78
Ralstonia solanacearum GMI1000 0.38 RS_RS10790 transcription elongation factor GreB 0.49 RS_RS10155 thiol:disulfide oxidoreductase low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF1033 Transcription elongation factor GreB 0.63 GFF2760 Glutathione S-transferase (EC 2.5.1.18) low > 90
Dechlorosoma suillum PS 0.36 Dsui_3005 transcription elongation factor GreB 0.45 Dsui_0688 glutathione S-transferase low > 51
Azospirillum brasilense Sp245 0.36 AZOBR_RS11855 transcription elongation factor GreB 0.45 AZOBR_RS16635 glutathione S-transferase low > 97
Azospirillum sp. SherDot2 0.35 MPMX19_00337 Transcription elongation factor GreB 0.45 MPMX19_04234 Disulfide-bond oxidoreductase YfcG low > 112
Magnetospirillum magneticum AMB-1 0.34 AMB_RS22350 transcription elongation factor GreB 0.46 AMB_RS13360 thiol:disulfide oxidoreductase low > 64
Sphingomonas koreensis DSMZ 15582 0.33 Ga0059261_0216 transcription elongation factor GreB 0.44 Ga0059261_0863 Glutathione S-transferase low > 68

Not shown: 13 genomes with orthologs for CSW01_13700 only; 18 genomes with orthologs for CSW01_17150 only