Conservation of cofitness between CSW01_06735 and CSW01_12885 in Vibrio cholerae E7946 ATCC 55056

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06735 methylisocitrate lyase 1.0 CSW01_12885 fructose 1,6-bisphosphatase 0.87 13
Alteromonas macleodii MIT1002 0.67 MIT1002_03129 Methylisocitrate lyase 0.35 MIT1002_00169 Fructose-1,6-bisphosphatase class 1 — —
Shewanella loihica PV-4 0.67 Shew_1820 prpB 2-methylisocitrate lyase (RefSeq) 0.35 Shew_0773 fructose-1,6-bisphosphatase (RefSeq) — —
Pseudomonas aeruginosa MRSN321 0.65 DY961_RS08515 prpB;go_function=methylisocitrate methylisocitrate lyase 0.39 DY961_RS11375 class 1 fructose-bisphosphatase — —
Pseudomonas aeruginosa PA14 0.65 IKLFDK_03445 methylisocitrate lyase 0.40 IKLFDK_27970 class 1 fructose-bisphosphatase — —
Pseudomonas aeruginosa PUPa3 0.65 DQ20_RS44335 prpB;go_function=methylisocitrate methylisocitrate lyase 0.39 DQ20_RS50720 class 1 fructose-bisphosphatase — —
Pseudomonas fluorescens FW300-N2E3 0.64 AO353_00900 2-methylisocitrate lyase 0.38 AO353_12205 fructose 1,6-bisphosphatase — —
Pseudomonas sp. RS175 0.64 PFR28_02928 2-methylisocitrate lyase 0.38 PFR28_04956 Fructose-1,6-bisphosphatase class 1 — —
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_20865 2-methylisocitrate lyase 0.38 AO356_09670 fructose 1,6-bisphosphatase — —
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_3819 Methylisocitrate lyase (EC 4.1.3.30) 0.39 Pf1N1B4_1596 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) — —
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_6061 Methylisocitrate lyase (EC 4.1.3.30) (from data) 0.38 Pf6N2E2_3813 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) — —
Pseudomonas sp. DMC3 0.63 GFF5230 2-methylisocitrate lyase 0.38 GFF4070 Fructose-1,6-bisphosphatase class 1 — —
Pseudomonas stutzeri RCH2 0.63 Psest_2321 methylisocitrate lyase 0.39 Psest_3956 Fructose-1,6-bisphosphatase — —
Pseudomonas putida KT2440 0.63 PP_2334 2-methylisocitrate lyase 0.39 PP_5040 fructose-1,6-bisphosphatase, class 1 — —
Pseudomonas sp. SVBP6 0.63 COO64_RS09900 prpB methylisocitrate lyase 0.39 COO64_RS13370 class 1 fructose-bisphosphatase — —
Pseudomonas simiae WCS417 0.63 PS417_21080 2-methylisocitrate lyase 0.38 PS417_01690 fructose 1,6-bisphosphatase — —
Shewanella sp. ANA-3 0.63 Shewana3_3825 prpB 2-methylisocitrate lyase (RefSeq) 0.35 Shewana3_0648 fructose-1,6-bisphosphatase (RefSeq) low > 73
Pseudomonas sp. BP01 0.63 JOY50_RS25750 prpB methylisocitrate lyase 0.38 JOY50_RS09485 class 1 fructose-bisphosphatase — —
Herbaspirillum seropedicae SmR1 0.63 HSERO_RS15660 2-methylisocitrate lyase 0.41 HSERO_RS17715 Fructose-1,6-bisphosphatase class 1 — —
Shewanella oneidensis MR-1 0.63 SO0345 prpB methylisocitrate lyase (NCBI ptt file) 0.35 SO3991 fbp fructose-1,6-bisphosphatase (NCBI ptt file) — —
Ralstonia solanacearum IBSBF1503 0.63 RALBFv3_RS02670 methylisocitrate lyase 0.40 RALBFv3_RS03275 class 1 fructose-bisphosphatase — —
Ralstonia solanacearum UW163 0.63 UW163_RS11055 methylisocitrate lyase 0.40 UW163_RS10450 class 1 fructose-bisphosphatase — —
Pseudomonas fluorescens GW456-L13 0.63 PfGW456L13_4118 Methylisocitrate lyase (EC 4.1.3.30) 0.39 PfGW456L13_335 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) — —
Pseudomonas orientalis W4I3 0.63 QF045_RS22905 methylisocitrate lyase 0.38 QF045_RS04755 class 1 fructose-bisphosphatase — —
Pseudomonas fluorescens SBW25 0.62 PFLU_RS22690 methylisocitrate lyase 0.37 PFLU_RS01745 class 1 fructose-bisphosphatase — —
Ralstonia solanacearum PSI07 0.62 RPSI07_RS14645 methylisocitrate lyase 0.40 RPSI07_RS14035 class 1 fructose-bisphosphatase — —
Pseudomonas lactucae CFBP13502 0.62 GEMAOFIL_04361 2-methylisocitrate lyase 0.38 GEMAOFIL_00560 Fructose-1,6-bisphosphatase class 1 — —
Pseudomonas fluorescens SBW25-INTG 0.62 PFLU_RS22690 methylisocitrate lyase 0.37 PFLU_RS01745 class 1 fructose-bisphosphatase — —
Pseudomonas syringae pv. syringae B728a 0.62 Psyr_2085 methylisocitrate lyase 0.38 Psyr_0370 D-fructose 1,6-bisphosphatase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.62 Psyr_2085 methylisocitrate lyase 0.38 Psyr_0370 D-fructose 1,6-bisphosphatase — —
Methylophilus sp. DMC18 0.62 GFF469 2-methylisocitrate lyase 0.31 GFF2746 Fructose-1,6-bisphosphatase class 1 — —
Pseudomonas segetis P6 0.62 MPMX49_02628 2-methylisocitrate lyase 0.40 MPMX49_04276 Fructose-1,6-bisphosphatase class 1 — —
Ralstonia solanacearum GMI1000 0.62 RS_RS10050 methylisocitrate lyase 0.41 RS_RS10665 fructose 1,6-bisphosphatase — —
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS14590 methylisocitrate lyase 0.41 ABZR87_RS15125 class 1 fructose-bisphosphatase — —
Paraburkholderia sabiae LMG 24235 0.62 QEN71_RS17555 methylisocitrate lyase 0.41 QEN71_RS03770 class 1 fructose-bisphosphatase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.62 OHPLBJKB_03339 2-methylisocitrate lyase 0.76 OHPLBJKB_03803 Fructose-1,6-bisphosphatase class 1 low > 74
Cupriavidus basilensis FW507-4G11 0.62 RR42_RS11260 Methylisocitrate lyase (EC 4.1.3.30) (from data) 0.40 RR42_RS05195 fructose 1,6-bisphosphatase — —
Escherichia coli ECRC62 0.62 BNILDI_23190 prpB methylisocitrate lyase 0.76 BNILDI_07310 fbp class 1 fructose-bisphosphatase low > 75
Escherichia coli ECOR38 0.62 HEPCGN_07485 prpB methylisocitrate lyase 0.76 HEPCGN_10145 fbp class 1 fructose-bisphosphatase low > 88
Escherichia coli ECOR27 0.62 NOLOHH_01775 prpB methylisocitrate lyase 0.76 NOLOHH_04205 fbp class 1 fructose-bisphosphatase low > 76
Escherichia coli BW25113 0.62 b0331 prpB 2-methylisocitrate lyase (NCBI) 0.76 b4232 fbp fructose-1,6-bisphosphatase (NCBI) low > 76
Escherichia fergusonii Becca 0.62 EFB2_03706 2-methylisocitrate lyase 0.76 EFB2_04301 Fructose-1,6-bisphosphatase class 1 low > 86
Escherichia coli BL21 0.62 ECD_00286 2-methylisocitrate lyase 0.76 ECD_04100 fructose-1,6-bisphosphatase I low > 61
Escherichia coli ECRC101 0.61 MCAODC_28130 prpB methylisocitrate lyase 0.76 MCAODC_02450 fbp class 1 fructose-bisphosphatase low > 87
Escherichia coli ECRC102 0.61 NIAGMN_06955 prpB methylisocitrate lyase 0.76 NIAGMN_09795 fbp class 1 fructose-bisphosphatase low > 80
Shewanella amazonensis SB2B 0.61 Sama_3294 prpB 2-methylisocitrate lyase (RefSeq) 0.37 Sama_0599 fructose-1,6-bisphosphatase (RefSeq) — —
Escherichia coli Nissle 1917 0.61 ECOLIN_RS02150 methylisocitrate lyase 0.76 ECOLIN_RS24555 class 1 fructose-bisphosphatase low > 55
Escherichia coli ECRC100 0.61 OKFHMN_08900 prpB methylisocitrate lyase 0.76 OKFHMN_11945 fbp class 1 fructose-bisphosphatase low > 79
Escherichia coli ECRC99 0.61 KEDOAH_19065 prpB methylisocitrate lyase 0.76 KEDOAH_16210 fbp class 1 fructose-bisphosphatase — —
Escherichia coli ECRC98 0.61 JDDGAC_12555 prpB methylisocitrate lyase 0.76 JDDGAC_15585 fbp class 1 fructose-bisphosphatase low > 87
Rhodanobacter sp000427505 FW510-R12 0.60 LRK53_RS09460 methylisocitrate lyase 0.35 LRK53_RS00140 class 1 fructose-bisphosphatase low > 59
Acinetobacter radioresistens SK82 0.60 MPMX26_01289 2-methylisocitrate lyase 0.37 MPMX26_02197 Fructose-1,6-bisphosphatase class 1 — —
Acinetobacter baumannii LAC-4 0.60 RR41_RS18485 methylisocitrate lyase 0.39 RR41_RS04640 class 1 fructose-bisphosphatase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF4263 Methylisocitrate lyase (EC 4.1.3.30) 0.76 GFF880 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) low > 78
Rhodanobacter sp. FW510-T8 0.59 OKGIIK_06565 prpB methylisocitrate lyase 0.36 OKGIIK_15125 fbp class 1 fructose-bisphosphatase low > 53
Rhodanobacter denitrificans FW104-10B01 0.58 LRK54_RS00695 methylisocitrate lyase 0.36 LRK54_RS08365 class 1 fructose-bisphosphatase low > 59
Rhodanobacter denitrificans MT42 0.58 LRK55_RS00470 methylisocitrate lyase 0.36 LRK55_RS08130 class 1 fructose-bisphosphatase low > 63
Castellaniella sp019104865 MT123 0.58 ABCV34_RS01670 methylisocitrate lyase 0.40 ABCV34_RS02565 class 1 fructose-bisphosphatase — —
Xanthomonas campestris pv. campestris strain 8004 0.58 Xcc-8004.3981.1 Methylisocitrate lyase (EC 4.1.3.30) 0.38 Xcc-8004.127.1 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) low > 74
Lysobacter sp. OAE881 0.57 ABIE51_RS06015 methylisocitrate lyase 0.36 ABIE51_RS00860 class 1 fructose-bisphosphatase low > 62
Dyella japonica UNC79MFTsu3.2 0.56 ABZR86_RS08480 methylisocitrate lyase 0.36 ABZR86_RS15255 class 1 fructose-bisphosphatase low > 74
Pseudomonas sp. S08-1 0.56 OH686_01690 methylisocitrate lyase 0.39 OH686_10290 Fructose-1,6-bisphosphatase, type I — —
Rhodospirillum rubrum S1H 0.34 Rru_A2320 Ankyrin (NCBI) 0.37 Rru_A2403 Inositol phosphatase/fructose-1,6-bisphosphatase (NCBI) low > 58
Rhodopseudomonas palustris CGA009 0.33 TX73_012370 methylisocitrate lyase 0.28 TX73_024120 class 1 fructose-bisphosphatase — —
Xanthobacter sp. DMC5 0.32 GFF2763 2,3-dimethylmalate lyase 0.30 GFF1141 Fructose-1,6-bisphosphatase class 1 — —
Variovorax sp. OAS795 0.32 ABID97_RS18835 oxaloacetate decarboxylase 0.43 ABID97_RS12875 class 1 fructose-bisphosphatase low > 91
Azospirillum sp. SherDot2 0.31 MPMX19_04657 2,3-dimethylmalate lyase 0.37 MPMX19_02944 Fructose-1,6-bisphosphatase class 1 low > 112
Paraburkholderia bryophila 376MFSha3.1 0.30 H281DRAFT_06209 carboxyvinyl-carboxyphosphonate phosphorylmutase 0.42 H281DRAFT_03991 D-fructose 1,6-bisphosphatase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.30 GFF3032 Methylisocitrate lyase (EC 4.1.3.30) 0.40 GFF274 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) — —
Dickeya dianthicola ME23 0.14 DZA65_RS07470 phosphoenolpyruvate mutase 0.76 DZA65_RS19645 class 1 fructose-bisphosphatase low > 75
Dickeya dianthicola 67-19 0.14 HGI48_RS06990 phosphoenolpyruvate mutase 0.76 HGI48_RS18510 class 1 fructose-bisphosphatase low > 71

Not shown: 5 genomes with orthologs for CSW01_06735 only; 33 genomes with orthologs for CSW01_12885 only