Conservation of cofitness between CSW01_11400 and CSW01_10085 in Vibrio cholerae E7946 ATCC 55056

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_11400 lytic transglycosylase 1.0 CSW01_10085 beta-ketoacyl-[acyl-carrier-protein] synthase II 0.54 20
Alteromonas macleodii MIT1002 0.50 MIT1002_02495 Membrane-bound lytic murein transglycosylase D precursor 0.70 MIT1002_01735 3-oxoacyl-[acyl-carrier-protein] synthase 2 — —
Shewanella loihica PV-4 0.46 Shew_2115 lytic transglycosylase, catalytic (RefSeq) 0.73 Shew_1605 beta-ketoacyl synthase (RefSeq) — —
Shewanella sp. ANA-3 0.41 Shewana3_2370 MltD domain-containing protein (RefSeq) 0.71 Shewana3_2557 3-oxoacyl-[acyl-carrier-protein] synthase II (RefSeq) — —
Shewanella oneidensis MR-1 0.40 SO2564 transglycosylase, Slt family (NCBI ptt file) 0.71 SO2774 fabF-1 3-oxoacyl-(acyl-carrier-protein) synthase II (NCBI ptt file) 0.42 4
Shewanella amazonensis SB2B 0.35 Sama_1885 Slt family transglycosylase (RefSeq) 0.74 Sama_1978 3-oxoacyl-(acyl-carrier-protein) synthase II (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.33 B158DRAFT_1060 FOG: LysM repeat 0.69 B158DRAFT_1751 beta-ketoacyl-acyl-carrier-protein synthase II low > 40
Pseudomonas sp. S08-1 0.33 OH686_03585 Membrane-bound lytic murein transglycosylase D 0.67 OH686_22150 beta-ketoacyl-acyl-carrier-protein synthase II low > 80
Pseudomonas segetis P6 0.33 MPMX49_02811 Membrane-bound lytic murein transglycosylase D 0.67 MPMX49_02082 3-oxoacyl-[acyl-carrier-protein] synthase 2 low > 75
Pseudomonas stutzeri RCH2 0.32 Psest_2070 FOG: LysM repeat 0.65 Psest_1690 beta-ketoacyl-acyl-carrier-protein synthase II — —
Pseudomonas aeruginosa MRSN321 0.31 DY961_RS20790 lytic transglycosylase domain-containing protein 0.65 DY961_RS02150 fabF;go_function=3-oxoacyl-[acyl-carrier-protein beta-ketoacyl-ACP synthase II — —
Pseudomonas aeruginosa PA14 0.31 IKLFDK_08810 lytic transglycosylase 0.65 IKLFDK_15085 beta-ketoacyl-ACP synthase II low > 98
Pseudomonas aeruginosa PUPa3 0.31 DQ20_RS54870 lytic transglycosylase domain-containing protein 0.65 DQ20_RS33435 fabF;go_function=3-oxoacyl-[acyl-carrier-protein beta-ketoacyl-ACP synthase II — —
Pantoea agglomerans CFBP13505 P0401 0.30 PagCFBP13505_RS09810 murein transglycosylase D 0.74 PagCFBP13505_RS05275 beta-ketoacyl-ACP synthase II low > 74
Pantoea sp. MT58 0.30 IAI47_15345 murein transglycosylase D 0.75 IAI47_12060 beta-ketoacyl-ACP synthase II low > 76
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_1760 Peptidoglycan-binding LysM:SLT:MLTD_N 0.63 Psyr_1649 3-oxoacyl-[acyl-carrier-protein] synthase II — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_1760 Peptidoglycan-binding LysM:SLT:MLTD_N 0.63 Psyr_1649 3-oxoacyl-[acyl-carrier-protein] synthase II — —
Pectobacterium carotovorum WPP14 0.30 HER17_RS05450 murein transglycosylase D 0.75 HER17_RS08660 beta-ketoacyl-ACP synthase II low > 75
Dickeya dianthicola 67-19 0.30 HGI48_RS16185 murein transglycosylase D 0.73 HGI48_RS13175 beta-ketoacyl-ACP synthase II low > 71
Dickeya dianthicola ME23 0.30 DZA65_RS17270 murein transglycosylase D 0.73 DZA65_RS13645 beta-ketoacyl-ACP synthase II low > 75
Serratia liquefaciens MT49 0.30 IAI46_04130 murein transglycosylase D 0.74 IAI46_09800 beta-ketoacyl-ACP synthase II 0.71 56
Dickeya dadantii 3937 0.30 DDA3937_RS16065 murein transglycosylase D 0.73 DDA3937_RS13110 beta-ketoacyl-ACP synthase II low > 74
Rahnella sp. WP5 0.30 EX31_RS21205 murein transglycosylase D 0.75 EX31_RS24445 beta-ketoacyl-ACP synthase II low > 89
Erwinia amylovora T8 0.29 OLJFJH_18645 murein transglycosylase D 0.73 OLJFJH_15520 beta-ketoacyl-ACP synthase II low > 58
Erwinia tracheiphila HP pepo 2.2 0.29 IJEDHG_15375 mltD murein transglycosylase D 0.72 IJEDHG_00670 fabF beta-ketoacyl-ACP synthase II low > 61
Erwinia tracheiphila SCR3 0.29 LU632_RS01075 mltD murein transglycosylase D 0.72 LU632_RS14810 fabF beta-ketoacyl-ACP synthase II low > 73
Klebsiella michiganensis M5al 0.28 BWI76_RS05435 murein transglycosylase D 0.75 BWI76_RS11100 beta-ketoacyl-[acyl-carrier-protein] synthase II low > 92
Enterobacter asburiae PDN3 0.28 EX28DRAFT_2683 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 0.75 EX28DRAFT_1834 beta-ketoacyl-acyl-carrier-protein synthase II low > 76
Pseudomonas putida KT2440 0.28 PP_4145 Membrane-bound lytic murein transglycosylase D 0.67 PP_1916 beta-ketoacyl-ACP synthase II / 3-oxo-cis-vaccenoyl-[acp] synthase / FabF / KASII / acetoacetyl-[acp] synthase — —
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_586 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) 0.62 Pf6N2E2_5954 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179) — —
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_24475 lytic transglycosylase 0.65 AO356_20175 3-oxoacyl-ACP synthase low > 104
Enterobacter sp. TBS_079 0.27 MPMX20_00896 Membrane-bound lytic murein transglycosylase D 0.73 MPMX20_01775 3-oxoacyl-[acyl-carrier-protein] synthase 2 low > 85
Pseudomonas sp. BP01 0.27 JOY50_RS07095 lytic transglycosylase domain-containing protein 0.67 JOY50_RS16780 fabF beta-ketoacyl-ACP synthase II low > 84
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_3341 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) 0.62 PfGW456L13_2107 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179) low > 87
Pseudomonas sp. RS175 0.27 PFR28_01551 Membrane-bound lytic murein transglycosylase D 0.65 PFR28_03008 3-oxoacyl-[acyl-carrier-protein] synthase 2 — —
Pseudomonas sp. SVBP6 0.27 COO64_RS19245 transglycosylase SLT domain-containing protein 0.66 COO64_RS05795 fabF beta-ketoacyl-ACP synthase II low > 93
Escherichia coli BW25113 0.27 b0211 mltD predicted membrane-bound lytic murein transglycosylase D (NCBI) 0.73 b1095 fabF 3-oxoacyl-(acyl carrier protein) synthase (NCBI) low > 76
Escherichia coli BL21 0.27 ECD_00204 putative membrane-bound lytic murein transglycosylase D 0.73 ECD_01091 3-oxoacyl-[acyl-carrier-protein] synthase II — —
Escherichia coli Nissle 1917 0.27 ECOLIN_RS01155 murein transglycosylase D 0.73 ECOLIN_RS06325 beta-ketoacyl-ACP synthase II — —
Pseudomonas simiae WCS417 0.26 PS417_12215 lytic transglycosylase 0.65 PS417_21430 3-oxoacyl-ACP synthase low > 88
Burkholderia phytofirmans PsJN 0.26 BPHYT_RS14205 lytic transglycosylase 0.61 BPHYT_RS14415 3-oxoacyl-ACP synthase — —
Pseudomonas fluorescens SBW25-INTG 0.26 PFLU_RS12905 transglycosylase SLT domain-containing protein 0.65 PFLU_RS23045 beta-ketoacyl-ACP synthase II low > 109
Pseudomonas fluorescens SBW25 0.26 PFLU_RS12905 transglycosylase SLT domain-containing protein 0.65 PFLU_RS23045 beta-ketoacyl-ACP synthase II low > 109
Paraburkholderia graminis OAS925 0.26 ABIE53_003006 membrane-bound lytic murein transglycosylase D 0.59 ABIE53_003045 3-oxoacyl-[acyl-carrier-protein] synthase II — —
Pseudomonas orientalis W4I3 0.26 QF045_RS14750 transglycosylase SLT domain-containing protein 0.65 QF045_RS23510 beta-ketoacyl-ACP synthase II low > 93
Pseudomonas lactucae CFBP13502 0.26 GEMAOFIL_02688 Membrane-bound lytic murein transglycosylase D 0.65 GEMAOFIL_04430 3-oxoacyl-[acyl-carrier-protein] synthase 2 low > 96
Paraburkholderia sabiae LMG 24235 0.26 QEN71_RS04765 transglycosylase SLT domain-containing protein 0.63 QEN71_RS04565 beta-ketoacyl-ACP synthase II — —
Dechlorosoma suillum PS 0.26 Dsui_2797 LysM repeat-containing protein 0.62 Dsui_2450 beta-ketoacyl-acyl-carrier-protein synthase II — —
Paraburkholderia bryophila 376MFSha3.1 0.25 H281DRAFT_04400 membrane-bound lytic murein transglycosylase D 0.59 H281DRAFT_04353 3-oxoacyl-[acyl-carrier-protein] synthase II — —
Ralstonia solanacearum UW163 0.24 UW163_RS15520 lytic transglycosylase 0.61 UW163_RS11905 beta-ketoacyl-[acyl-carrier-protein] synthase II — —
Ralstonia sp. UNC404CL21Col 0.24 ABZR87_RS14160 transglycosylase SLT domain-containing protein 0.61 ABZR87_RS10155 beta-ketoacyl-ACP synthase II — —
Ralstonia solanacearum IBSBF1503 0.24 RALBFv3_RS02210 lytic transglycosylase 0.61 RALBFv3_RS14440 beta-ketoacyl-[acyl-carrier-protein] synthase II — —
Ralstonia solanacearum PSI07 0.24 RPSI07_RS15235 lytic transglycosylase 0.61 RPSI07_RS19020 beta-ketoacyl-[acyl-carrier-protein] synthase II — —
Cupriavidus basilensis FW507-4G11 0.24 RR42_RS13565 lytic transglycosylase 0.59 RR42_RS14090 3-oxoacyl-ACP synthase — —
Methylophilus sp. DMC18 0.23 GFF1316 hypothetical protein 0.58 GFF1269 3-oxoacyl-[acyl-carrier-protein] synthase 2 — —
Acidovorax sp. GW101-3H11 0.23 Ac3H11_477 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) 0.55 Ac3H11_1576 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.21 GFF4256 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) 0.61 GFF3337 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179) — —
Variovorax sp. SCN45 0.21 GFF1116 Membrane-bound lytic murein transglycosylase D 0.60 GFF3861 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179) — —
Variovorax sp. OAS795 0.21 ABID97_RS14725 transglycosylase SLT domain-containing protein 0.60 ABID97_RS08320 beta-ketoacyl-ACP synthase II — —
Desulfovibrio vulgaris Hildenborough JW710 0.19 DVU0041 transglycosylase, SLT family (TIGR) 0.49 DVU1204 fabF 3-oxoacyl-(acyl-carrier-protein) synthase II (TIGR) — —
Desulfovibrio vulgaris Miyazaki F 0.17 DvMF_2218 Lytic transglycosylase catalytic (RefSeq) 0.48 DvMF_3098 3-oxoacyl-(acyl-carrier-protein) synthase 2 (RefSeq) — —
Dyella japonica UNC79MFTsu3.2 0.13 ABZR86_RS07290 LysM peptidoglycan-binding domain-containing protein 0.66 ABZR86_RS06160 beta-ketoacyl-ACP synthase II — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.12 ABZR88_RS18295 lytic transglycosylase domain-containing protein 0.43 ABZR88_RS01605 beta-ketoacyl-ACP synthase II — —

Not shown: 1 genomes with orthologs for CSW01_11400 only; 55 genomes with orthologs for CSW01_10085 only