| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_07065 | | multidrug resistance protein | 1.0 | CSW01_08685 | | glycogen synthase | 0.57 | 17 |
| Herbaspirillum seropedicae SmR1 | 0.42 | HSERO_RS16345 | | multidrug transporter | 0.22 | HSERO_RS12515 | | glycogen synthase | low | > 78 |
| Ralstonia solanacearum GMI1000 | 0.40 | RS_RS09365 | | multidrug transporter | 0.24 | RS_RS18320 | | glycogen synthase | low | > 80 |
| Enterobacter asburiae PDN3 | 0.36 | EX28DRAFT_2613 | | efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family | 0.26 | EX28DRAFT_4118 | | glycogen/starch synthase, ADP-glucose type | low | > 76 |
| Sphingobium sp. HT1-2 | 0.33 | GFF3799 | | Outer membrane factor (OMF) lipoprotein associated wth EmrAB-OMF efflux system | 0.23 | GFF2034 | | Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) | low | > 95 |
| Ralstonia solanacearum IBSBF1503 | 0.32 | RALBFv3_RS15705 | | RND transporter | 0.24 | RALBFv3_RS22290 | | glycogen synthase GlgA | low | > 76 |
| Ralstonia sp. UNC404CL21Col | 0.31 | ABZR87_RS11235 | | AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor | 0.25 | ABZR87_RS17230 | | glycogen synthase GlgA | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.31 | RPSI07_RS17650 | | RND transporter | 0.24 | RPSI07_RS00900 | | glycogen synthase GlgA | low | > 81 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.28 | Xcc-8004.3526.1 | | Outer membrane component of tripartite multidrug resistance system | 0.23 | Xcc-8004.537.1 | | Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) | low | > 74 |
| Rhodospirillum rubrum S1H | 0.27 | Rru_A0860 | | RND efflux system, outer membrane lipoprotein, NodT (NCBI) | 0.29 | Rru_A2245 | | Glycogen/starch synthases, ADP-glucose type (NCBI) | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.26 | QEN71_RS39370 | | efflux transporter outer membrane subunit | 0.29 | QEN71_RS23430 | | glycogen synthase GlgA | low | > 153 |
| Pseudomonas fluorescens FW300-N2E2 | 0.25 | Pf6N2E2_147 | | Outer membrane component of tripartite multidrug resistance system | 0.22 | Pf6N2E2_1078 | | Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.25 | AO356_01035 | | multidrug RND transporter | 0.22 | AO356_26025 | | glycogen synthase | low | > 104 |
| Pseudomonas simiae WCS417 | 0.25 | PS417_16920 | | multidrug RND transporter | 0.21 | PS417_14480 | | glycogen synthase | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.25 | PFLU_RS18905 | | efflux transporter outer membrane subunit | 0.21 | PFLU_RS16410 | | glycogen synthase GlgA | low | > 109 |
| Pseudomonas sp. RS175 | 0.25 | PFR28_02749 | | Toluene efflux pump outer membrane protein TtgF | 0.22 | PFR28_02145 | | Glycogen synthase | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.25 | PFLU_RS18905 | | efflux transporter outer membrane subunit | 0.21 | PFLU_RS16410 | | glycogen synthase GlgA | low | > 109 |
| Pseudomonas lactucae CFBP13502 | 0.25 | GEMAOFIL_03699 | | Toluene efflux pump outer membrane protein TtgF | 0.21 | GEMAOFIL_03185 | | Glycogen synthase | low | > 93 |
| Variovorax sp. SCN45 | 0.25 | GFF4769 | | Outer membrane factor (OMF) lipoprotein associated wth EmrAB-OMF efflux system | 0.25 | GFF7302 | | Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) | low | > 127 |
| Pseudomonas fluorescens FW300-N1B4 | 0.25 | Pf1N1B4_4000 | | Outer membrane component of tripartite multidrug resistance system | 0.22 | Pf1N1B4_4687 | | Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.25 | AO353_27850 | | multidrug RND transporter | 0.21 | AO353_23775 | | glycogen synthase | low | > 101 |
| Pseudomonas sp. SVBP6 | 0.25 | COO64_RS08910 | | efflux transporter outer membrane subunit | 0.23 | COO64_RS24815 | glgA | glycogen synthase GlgA | low | > 93 |
| Methylophilus sp. DMC18 | 0.25 | GFF2649 | | Toluene efflux pump outer membrane protein TtgF | 0.27 | GFF1174 | | Glycogen synthase | low | > 43 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.25 | H281DRAFT_01551 | | efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family | 0.28 | H281DRAFT_04861 | | starch synthase | low | > 103 |
| Pseudomonas fluorescens GW456-L13 | 0.24 | PfGW456L13_2604 | | Outer membrane component of tripartite multidrug resistance system | 0.22 | PfGW456L13_3245 | | Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) | low | > 87 |
| Pseudomonas aeruginosa PA14 | 0.24 | IKLFDK_20075 | | RND transporter | 0.22 | IKLFDK_10595 | | glycogen synthase GlgA | low | > 100 |
| Paraburkholderia graminis OAS925 | 0.24 | ABIE53_001875 | | NodT family efflux transporter outer membrane factor (OMF) lipoprotein | 0.26 | ABIE53_001742 | | starch synthase | low | > 113 |
| Pseudomonas sp. DMC3 | 0.24 | GFF1486 | | Toluene efflux pump outer membrane protein TtgI | 0.22 | GFF3482 | | Glycogen synthase | low | > 89 |
| Variovorax sp. OAS795 | 0.23 | ABID97_RS20400 | | efflux transporter outer membrane subunit | 0.25 | ABID97_RS04535 | | glycogen synthase GlgA | low | > 91 |
| Pseudomonas putida KT2440 | 0.21 | PP_1263 | | putative Fusaric acid resistance protein | 0.22 | PP_4050 | | glycogen synthase | low | > 96 |
| Pseudomonas sp. BP01 | 0.20 | JOY50_RS15460 | | efflux transporter outer membrane subunit | 0.22 | JOY50_RS06710 | glgA | glycogen synthase GlgA | low | > 84 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.20 | Psyr_1045 | | RND efflux system, outer membrane lipoprotein, NodT | 0.22 | Psyr_2992 | | Starch (bacterial glycogen) synthase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.20 | Psyr_1045 | | RND efflux system, outer membrane lipoprotein, NodT | 0.22 | Psyr_2992 | | Starch (bacterial glycogen) synthase | low | > 86 |
| Rahnella sp. WP5 | 0.18 | EX31_RS13650 | | efflux transporter outer membrane subunit | 0.26 | EX31_RS05010 | | glycogen synthase GlgA | low | > 89 |
| Serratia liquefaciens MT49 | 0.18 | IAI46_19995 | | efflux transporter outer membrane subunit | 0.23 | IAI46_23925 | | glycogen synthase GlgA | low | > 86 |
| Klebsiella michiganensis M5al | 0.18 | BWI76_RS23620 | | multidrug resistance transporter | 0.26 | BWI76_RS26200 | | starch synthase | low | > 92 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.17 | GFF3807 | | RND efflux system, outer membrane lipoprotein, NodT family | 0.25 | GFF578 | | Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) | low | > 78 |
| Klebsiella pneumoniae MKP103 | 0.17 | KDGMDA_26550 | | multidrug resistance outer membrane protein MdtQ | 0.26 | KDGMDA_07085 | | glycogen synthase GlgA | low | > 95 |
| Enterobacter sp. TBS_079 | 0.17 | MPMX20_03107 | | Antibiotic efflux pump outer membrane protein ArpC | 0.26 | MPMX20_04311 | | Glycogen synthase | low | > 85 |
| Pseudomonas sp. S08-1 | 0.16 | OH686_00935 | | Outer membrane factor (OMF) lipoprotein associated wth MdtABC efflux system | 0.23 | OH686_01280 | | Glycogen synthase, ADP-glucose transglucosylase | low | > 80 |
| Ralstonia solanacearum UW163 | 0.16 | UW163_RS16965 | | RND transporter | 0.24 | UW163_RS22835 | | glycogen synthase GlgA | — | — |
| Escherichia coli ECRC100 | 0.16 | OKFHMN_12765 | mdtP | multidrug efflux transporter outer membrane subunit MdtP | 0.26 | OKFHMN_16900 | glgA | glycogen synthase GlgA | low | > 79 |
| Escherichia coli ECRC98 | 0.16 | JDDGAC_16400 | mdtP | multidrug efflux transporter outer membrane subunit MdtP | 0.26 | JDDGAC_20530 | glgA | glycogen synthase GlgA | low | > 87 |
| Escherichia coli ECRC101 | 0.16 | MCAODC_03275 | mdtP | multidrug efflux transporter outer membrane subunit MdtP | 0.26 | MCAODC_07430 | glgA | glycogen synthase GlgA | low | > 88 |
| Escherichia coli ECRC102 | 0.16 | NIAGMN_10610 | mdtP | multidrug efflux transporter outer membrane subunit MdtP | 0.26 | NIAGMN_14670 | glgA | glycogen synthase GlgA | low | > 80 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.16 | OHPLBJKB_03959 | | Cation efflux system protein CusC | 0.26 | OHPLBJKB_00272 | | Glycogen synthase | low | > 74 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.16 | DVU0062 | | RND efflux system, outer membrane protein, NodT family (TIGR) | 0.31 | DVU2244 | glgA | glycogen synthase (TIGR) | 0.38 | 25 |
| Escherichia coli ECRC62 | 0.16 | BNILDI_06505 | mdtP | multidrug efflux transporter outer membrane subunit MdtP | 0.26 | BNILDI_02825 | glgA | glycogen synthase GlgA | low | > 75 |
| Escherichia coli ECOR27 | 0.16 | NOLOHH_05020 | mdtP | multidrug efflux transporter outer membrane subunit MdtP | 0.26 | NOLOHH_08690 | glgA | glycogen synthase GlgA | low | > 76 |
| Escherichia coli ECOR38 | 0.15 | HEPCGN_11395 | mdtP | multidrug efflux transporter outer membrane subunit MdtP | 0.26 | HEPCGN_15715 | glgA | glycogen synthase GlgA | low | > 88 |
| Escherichia coli Nissle 1917 | 0.15 | ECOLIN_RS23635 | | multidrug efflux transporter outer membrane subunit MdtP | 0.26 | ECOLIN_RS19625 | | glycogen synthase GlgA | low | > 55 |
| Escherichia fergusonii Becca | 0.15 | EFB2_04503 | | Cation efflux system protein CusC | 0.26 | EFB2_00390 | | Glycogen synthase | low | > 86 |
| Escherichia coli BL21 | 0.15 | ECD_03952 | | outer membrane factor of efflux pump | 0.26 | ECD_03281 | | glycogen synthase | low | > 61 |
| Escherichia coli BW25113 | 0.15 | b4080 | yjcP | predicted outer membrane factor of efflux pump (NCBI) | 0.26 | b3429 | glgA | glycogen synthase (NCBI) | low | > 76 |
| Escherichia coli ECRC99 | 0.15 | KEDOAH_15385 | mdtP | multidrug efflux transporter outer membrane subunit MdtP | 0.26 | KEDOAH_11240 | glgA | glycogen synthase GlgA | — | — |
| Pantoea agglomerans CFBP13505 P0401 | 0.14 | PagCFBP13505_RS04945 | | efflux transporter outer membrane subunit | 0.27 | PagCFBP13505_RS18210 | | glycogen synthase GlgA | low | > 74 |
| Rhodopseudomonas palustris CGA009 | 0.14 | TX73_013300 | | efflux transporter outer membrane subunit | 0.24 | TX73_001985 | | glycogen synthase GlgA | low | > 86 |
| Pantoea sp. MT58 | 0.14 | IAI47_12395 | | efflux transporter outer membrane subunit | 0.27 | IAI47_01695 | | glycogen synthase GlgA | low | > 76 |
| Dickeya dadantii 3937 | 0.14 | DDA3937_RS14115 | | efflux transporter outer membrane subunit | 0.24 | DDA3937_RS19730 | | glycogen synthase GlgA | low | > 74 |
| Pseudomonas stutzeri RCH2 | 0.14 | Psest_2141 | | efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family | 0.22 | Psest_2172 | | glycogen/starch synthases, ADP-glucose type | low | > 67 |
| Dickeya dianthicola 67-19 | 0.14 | HGI48_RS14115 | | efflux transporter outer membrane subunit | 0.24 | HGI48_RS19840 | | glycogen synthase GlgA | low | > 71 |
| Erwinia amylovora T8 | 0.14 | OLJFJH_16410 | | RND transporter | 0.25 | OLJFJH_04245 | | glycogen synthase GlgA | low | > 58 |
| Desulfovibrio vulgaris Miyazaki F | 0.14 | DvMF_0034 | | RND efflux system, outer membrane lipoprotein, NodT family (RefSeq) | 0.30 | DvMF_0841 | | glycogen/starch synthase, ADP-glucose type (RefSeq) | low | > 51 |
| Shewanella sp. ANA-3 | 0.13 | Shewana3_1994 | | outer membrane efflux protein (RefSeq) | 0.15 | Shewana3_2930 | | starch synthase catalytic subunit (RefSeq) | low | > 73 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.13 | CA265_RS05050 | | RND transporter | 0.24 | CA265_RS04140 | | glycogen synthase | low | > 88 |
| Cellulophaga baltica 18 | 0.13 | M666_RS04030 | | efflux transporter outer membrane subunit | 0.15 | M666_RS00870 | | glycogen/starch synthase | low | > 67 |
| Agrobacterium fabrum C58 | 0.13 | Atu2552 | | nodulation protein T precursor | 0.26 | Atu5285 | | glycogen synthase | — | — |
| Dickeya dianthicola ME23 | 0.12 | DZA65_RS03600 | | efflux transporter outer membrane subunit | 0.24 | DZA65_RS20915 | | glycogen synthase GlgA | low | > 75 |
| Magnetospirillum magneticum AMB-1 | 0.11 | AMB_RS09475 | | outer membrane protein | 0.25 | AMB_RS10650 | | glycogen synthase | — | — |
| Pectobacterium carotovorum WPP14 | 0.11 | HER17_RS07525 | | efflux transporter outer membrane subunit | 0.24 | HER17_RS01500 | | glycogen synthase GlgA | 0.65 | 39 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.11 | ABZR88_RS12550 | | efflux transporter outer membrane subunit | 0.23 | ABZR88_RS18980 | | glycogen synthase | low | > 71 |
| Shewanella oneidensis MR-1 | 0.11 | SO0822 | | outer membrane efflux family protein (NCBI ptt file) | 0.14 | SO1499 | glgA | glycogen synthase (NCBI ptt file) | low | > 76 |
| Alteromonas macleodii MIT1002 | 0.11 | MIT1002_00868 | | Toluene efflux pump outer membrane protein TtgF precursor | 0.45 | MIT1002_00235 | | Glycogen synthase | low | > 70 |
| Bosea sp. OAE506 | 0.10 | ABIE41_RS01590 | | efflux transporter outer membrane subunit | 0.20 | ABIE41_RS13060 | | glycogen synthase GlgA | low | > 77 |
| Fusobacterium nucleatum SB010 | 0.09 | HUW76_07980 | | TolC family protein | 0.25 | HUW76_05855 | | glycogen synthase | low | > 35 |
Not shown: 30 genomes with orthologs for CSW01_07065 only; 11 genomes with orthologs for CSW01_08685 only