Conservation of cofitness between CSW01_09595 and CSW01_06735 in Vibrio cholerae E7946 ATCC 55056

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_09595 peptidylprolyl isomerase 1.0 CSW01_06735 methylisocitrate lyase 0.70 12
Escherichia coli ECRC102 0.33 NIAGMN_06365 ppiD peptidylprolyl isomerase 0.61 NIAGMN_06955 prpB methylisocitrate lyase low > 80
Escherichia coli ECRC99 0.33 KEDOAH_19655 ppiD peptidylprolyl isomerase 0.61 KEDOAH_19065 prpB methylisocitrate lyase — —
Escherichia coli BW25113 0.33 b0441 ppiD peptidyl-prolyl cis-trans isomerase (rotamase D) (NCBI) 0.62 b0331 prpB 2-methylisocitrate lyase (NCBI) low > 76
Escherichia coli ECOR27 0.33 NOLOHH_01245 ppiD peptidylprolyl isomerase 0.62 NOLOHH_01775 prpB methylisocitrate lyase low > 76
Escherichia coli Nissle 1917 0.33 ECOLIN_RS02645 peptidylprolyl isomerase 0.61 ECOLIN_RS02150 methylisocitrate lyase low > 55
Escherichia coli ECRC98 0.33 JDDGAC_11965 ppiD peptidylprolyl isomerase 0.61 JDDGAC_12555 prpB methylisocitrate lyase low > 87
Escherichia fergusonii Becca 0.33 EFB2_03616 Peptidyl-prolyl cis-trans isomerase D 0.62 EFB2_03706 2-methylisocitrate lyase low > 86
Escherichia coli ECRC100 0.33 OKFHMN_08310 ppiD peptidylprolyl isomerase 0.61 OKFHMN_08900 prpB methylisocitrate lyase low > 79
Escherichia coli ECRC101 0.33 MCAODC_27535 ppiD peptidylprolyl isomerase 0.61 MCAODC_28130 prpB methylisocitrate lyase low > 88
Escherichia coli ECRC62 0.33 BNILDI_22660 ppiD peptidylprolyl isomerase 0.62 BNILDI_23190 prpB methylisocitrate lyase low > 75
Escherichia coli ECOR38 0.33 HEPCGN_06925 ppiD peptidylprolyl isomerase 0.62 HEPCGN_07485 prpB methylisocitrate lyase low > 88
Escherichia coli BL21 0.33 ECD_00393 periplasmic folding chaperone, has an inactive PPIase domain 0.62 ECD_00286 2-methylisocitrate lyase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_03232 Peptidyl-prolyl cis-trans isomerase D 0.62 OHPLBJKB_03339 2-methylisocitrate lyase low > 74
Shewanella sp. ANA-3 0.33 Shewana3_2657 PpiC-type peptidyl-prolyl cis-trans isomerase (RefSeq) 0.63 Shewana3_3825 prpB 2-methylisocitrate lyase (RefSeq) low > 73
Dickeya dianthicola 67-19 0.33 HGI48_RS05705 peptidylprolyl isomerase 0.14 HGI48_RS06990 phosphoenolpyruvate mutase low > 71
Shewanella oneidensis MR-1 0.33 SO1798 ppiD peptidyl-prolyl cis-trans isomerase D (NCBI ptt file) 0.63 SO0345 prpB methylisocitrate lyase (NCBI ptt file) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF4357 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) 0.59 GFF4263 Methylisocitrate lyase (EC 4.1.3.30) low > 78
Dickeya dianthicola ME23 0.33 DZA65_RS06030 peptidylprolyl isomerase 0.14 DZA65_RS07470 phosphoenolpyruvate mutase low > 75
Alteromonas macleodii MIT1002 0.32 MIT1002_02755 Peptidyl-prolyl cis-trans isomerase D 0.67 MIT1002_03129 Methylisocitrate lyase low > 70
Shewanella amazonensis SB2B 0.32 Sama_1228 peptidyl-prolyl cis-trans isomerase D (RefSeq) 0.61 Sama_3294 prpB 2-methylisocitrate lyase (RefSeq) low > 62
Shewanella loihica PV-4 0.30 Shew_2504 PpiC-type peptidyl-prolyl cis-trans isomerase (RefSeq) 0.67 Shew_1820 prpB 2-methylisocitrate lyase (RefSeq) low > 60
Pseudomonas sp. S08-1 0.24 OH686_03625 Peptidyl-prolyl cis-trans isomerase PpiD 0.56 OH686_01690 methylisocitrate lyase low > 80
Pseudomonas fluorescens FW300-N1B4 0.22 Pf1N1B4_3949 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) 0.63 Pf1N1B4_3819 Methylisocitrate lyase (EC 4.1.3.30) — —
Pseudomonas sp. RS175 0.22 PFR28_01231 Peptidyl-prolyl cis-trans isomerase D 0.64 PFR28_02928 2-methylisocitrate lyase low > 88
Pseudomonas stutzeri RCH2 0.22 Psest_2283 Parvulin-like peptidyl-prolyl isomerase 0.63 Psest_2321 methylisocitrate lyase — —
Pseudomonas fluorescens FW300-N2E3 0.21 AO353_20200 peptidylprolyl isomerase 0.64 AO353_00900 2-methylisocitrate lyase low > 101
Pseudomonas fluorescens FW300-N2C3 0.21 AO356_01725 peptidylprolyl isomerase 0.64 AO356_20865 2-methylisocitrate lyase — —
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS19150 peptidyl-prolyl cis-trans isomerase 0.62 PFLU_RS22690 methylisocitrate lyase — —
Pseudomonas fluorescens SBW25 0.21 PFLU_RS19150 peptidyl-prolyl cis-trans isomerase 0.62 PFLU_RS22690 methylisocitrate lyase — —
Pseudomonas fluorescens GW456-L13 0.21 PfGW456L13_2556 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) 0.63 PfGW456L13_4118 Methylisocitrate lyase (EC 4.1.3.30) low > 87
Kangiella aquimarina DSM 16071 0.21 B158DRAFT_1042 Parvulin-like peptidyl-prolyl isomerase 0.64 B158DRAFT_1343 methylisocitrate lyase low > 40
Pseudomonas simiae WCS417 0.21 PS417_17215 peptidylprolyl isomerase 0.63 PS417_21080 2-methylisocitrate lyase — —
Pseudomonas lactucae CFBP13502 0.21 GEMAOFIL_03740 Peptidyl-prolyl cis-trans isomerase D 0.62 GEMAOFIL_04361 2-methylisocitrate lyase low > 93
Dyella japonica UNC79MFTsu3.2 0.21 ABZR86_RS07300 SurA N-terminal domain-containing protein 0.56 ABZR86_RS08480 methylisocitrate lyase low > 74
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_2214 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) 0.63 Pf6N2E2_6061 Methylisocitrate lyase (EC 4.1.3.30) (from data) — —
Pseudomonas syringae pv. syringae B728a 0.21 Psyr_1751 PpiC-type peptidyl-prolyl cis-trans isomerase 0.62 Psyr_2085 methylisocitrate lyase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.21 Psyr_1751 PpiC-type peptidyl-prolyl cis-trans isomerase 0.62 Psyr_2085 methylisocitrate lyase low > 86
Pseudomonas sp. SVBP6 0.21 COO64_RS19215 SurA N-terminal domain-containing protein 0.63 COO64_RS09900 prpB methylisocitrate lyase low > 93
Pseudomonas sp. DMC3 0.21 GFF1447 Peptidyl-prolyl cis-trans isomerase D 0.63 GFF5230 2-methylisocitrate lyase low > 89
Pseudomonas segetis P6 0.20 MPMX49_02265 Peptidyl-prolyl cis-trans isomerase D 0.62 MPMX49_02628 2-methylisocitrate lyase low > 75
Pseudomonas putida KT2440 0.20 PP_2304 putative Peptidyl-prolyl cis-trans isomerase D 0.63 PP_2334 2-methylisocitrate lyase low > 96
Pseudomonas sp. BP01 0.20 JOY50_RS25895 SurA N-terminal domain-containing protein 0.63 JOY50_RS25750 prpB methylisocitrate lyase low > 84
Methylophilus sp. DMC18 0.20 GFF1307 Peptidyl-prolyl cis-trans isomerase D 0.62 GFF469 2-methylisocitrate lyase — —
Rhodanobacter sp. FW510-T8 0.19 OKGIIK_08010 Peptidylprolyl isomerase 0.59 OKGIIK_06565 prpB methylisocitrate lyase low > 52
Pseudomonas aeruginosa PA14 0.19 IKLFDK_08775 peptidylprolyl isomerase 0.65 IKLFDK_03445 methylisocitrate lyase low > 100
Rhodanobacter denitrificans FW104-10B01 0.19 LRK54_RS16755 SurA N-terminal domain-containing protein 0.58 LRK54_RS00695 methylisocitrate lyase 0.84 35
Rhodanobacter sp000427505 FW510-R12 0.19 LRK53_RS12115 SurA N-terminal domain-containing protein 0.60 LRK53_RS09460 methylisocitrate lyase low > 59
Ralstonia solanacearum UW163 0.19 UW163_RS14630 peptidylprolyl isomerase 0.63 UW163_RS11055 methylisocitrate lyase — —
Ralstonia solanacearum IBSBF1503 0.19 RALBFv3_RS01320 peptidylprolyl isomerase 0.63 RALBFv3_RS02670 methylisocitrate lyase 0.64 31
Ralstonia solanacearum PSI07 0.18 RPSI07_RS16155 peptidylprolyl isomerase 0.62 RPSI07_RS14645 methylisocitrate lyase low > 81
Rhodanobacter denitrificans MT42 0.18 LRK55_RS16480 SurA N-terminal domain-containing protein 0.58 LRK55_RS00470 methylisocitrate lyase 0.95 14
Variovorax sp. OAS795 0.18 ABID97_RS10675 SurA N-terminal domain-containing protein 0.32 ABID97_RS18835 oxaloacetate decarboxylase low > 91
Ralstonia solanacearum GMI1000 0.18 RS_RS08675 peptidyl-prolyl cis-trans isomerase 0.62 RS_RS10050 methylisocitrate lyase low > 80
Xanthomonas campestris pv. campestris strain 8004 0.18 Xcc-8004.4039.1 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) 0.58 Xcc-8004.3981.1 Methylisocitrate lyase (EC 4.1.3.30) low > 74
Marinobacter adhaerens HP15 0.18 HP15_2181 PpiC-type peptidyl-prolyl cis-trans isomerase 0.68 HP15_1932 methylisocitrate lyase 2 — —
Cupriavidus basilensis FW507-4G11 0.17 RR42_RS09045 peptidylprolyl isomerase 0.62 RR42_RS11260 Methylisocitrate lyase (EC 4.1.3.30) (from data) low > 128
Herbaspirillum seropedicae SmR1 0.17 HSERO_RS11155 peptidyl-prolyl cis-trans isomerase 0.63 HSERO_RS15660 2-methylisocitrate lyase — —
Lysobacter sp. OAE881 0.17 ABIE51_RS14120 peptidyl-prolyl cis-trans isomerase 0.57 ABIE51_RS06015 methylisocitrate lyase low > 62
Hydrogenophaga sp. GW460-11-11-14-LB1 0.16 GFF3854 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) 0.30 GFF3032 Methylisocitrate lyase (EC 4.1.3.30) — —
Paraburkholderia sabiae LMG 24235 0.16 QEN71_RS21955 SurA N-terminal domain-containing protein 0.62 QEN71_RS17555 methylisocitrate lyase low > 153
Castellaniella sp019104865 MT123 0.16 ABCV34_RS03085 SurA N-terminal domain-containing protein 0.58 ABCV34_RS01670 methylisocitrate lyase — —
Acinetobacter radioresistens SK82 0.13 MPMX26_01332 Peptidyl-prolyl cis-trans isomerase D 0.60 MPMX26_01289 2-methylisocitrate lyase — —
Azospirillum sp. SherDot2 0.12 MPMX19_00894 Peptidyl-prolyl cis-trans isomerase D 0.31 MPMX19_04657 2,3-dimethylmalate lyase — —
Azospirillum brasilense Sp245 0.12 AZOBR_RS07495 peptidylprolyl isomerase 0.27 AZOBR_RS27785 carboxyvinyl-carboxyphosphonate phosphorylmutase low > 97
Acinetobacter baumannii LAC-4 0.12 RR41_RS12370 SurA N-terminal domain-containing protein 0.60 RR41_RS18485 methylisocitrate lyase — —
Rhodopseudomonas palustris CGA009 0.11 TX73_014975 SurA N-terminal domain-containing protein 0.33 TX73_012370 methylisocitrate lyase low > 86
Rhodospirillum rubrum S1H 0.10 Rru_A1890 hypothetical protein (NCBI) 0.34 Rru_A2320 Ankyrin (NCBI) low > 58

Not shown: 23 genomes with orthologs for CSW01_09595 only; 5 genomes with orthologs for CSW01_06735 only