Conservation of cofitness between CSW01_03615 and CSW01_06230 in Vibrio cholerae E7946 ATCC 55056

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03615 anhydro-N-acetylmuramic acid kinase 1.0 CSW01_06230 LrgB family protein 0.56 2
Pectobacterium carotovorum WPP14 0.53 HER17_RS09280 anhydro-N-acetylmuramic acid kinase 0.50 HER17_RS13480 CidB/LrgB family autolysis modulator low > 75
Dickeya dianthicola ME23 0.53 DZA65_RS13095 anhydro-N-acetylmuramic acid kinase 0.50 DZA65_RS08945 CidB/LrgB family autolysis modulator low > 75
Dickeya dadantii 3937 0.53 DDA3937_RS12585 anhydro-N-acetylmuramic acid kinase 0.48 DDA3937_RS08490 CidB/LrgB family autolysis modulator low > 74
Dickeya dianthicola 67-19 0.53 HGI48_RS12640 anhydro-N-acetylmuramic acid kinase 0.50 HGI48_RS08655 CidB/LrgB family autolysis modulator low > 71
Enterobacter sp. TBS_079 0.53 MPMX20_01998 Anhydro-N-acetylmuramic acid kinase 0.50 MPMX20_03114 Inner membrane protein YohK low > 85
Serratia liquefaciens MT49 0.52 IAI46_11350 anhydro-N-acetylmuramic acid kinase 0.49 IAI46_07945 CidB/LrgB family autolysis modulator low > 86
Enterobacter asburiae PDN3 0.52 EX28DRAFT_1636 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 0.50 EX28DRAFT_0413 TIGR00659 family protein low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.52 GFF3634 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) 0.49 GFF3796 LrgA-associated membrane protein LrgB low > 78
Rahnella sp. WP5 0.52 EX31_RS13765 anhydro-N-acetylmuramic acid kinase 0.50 EX31_RS11260 CidB/LrgB family autolysis modulator 0.49 6
Escherichia coli ECOR38 0.51 HEPCGN_05870 anmK anhydro-N-acetylmuramic acid kinase 0.49 HEPCGN_22840 yohK CidB/LrgB family autolysis modulator low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_02085 Anhydro-N-acetylmuramic acid kinase 0.49 OHPLBJKB_01569 Inner membrane protein YohK low > 73
Escherichia coli ECRC100 0.50 OKFHMN_27485 anmK anhydro-N-acetylmuramic acid kinase 0.48 OKFHMN_23575 yohK CidB/LrgB family autolysis modulator low > 80
Escherichia coli ECRC98 0.50 JDDGAC_02075 anmK anhydro-N-acetylmuramic acid kinase 0.48 JDDGAC_27530 yohK CidB/LrgB family autolysis modulator low > 86
Escherichia coli BL21 0.50 ECD_01610 anhydro-N-acetylmuramic acid kinase 0.49 ECD_02071 LrgB family inner membrane protein low > 61
Escherichia coli ECRC102 0.50 NIAGMN_00580 anmK anhydro-N-acetylmuramic acid kinase 0.48 NIAGMN_21340 yohK CidB/LrgB family autolysis modulator — —
Escherichia coli BW25113 0.50 b1640 ydhH anhydro-N-acetylmuramic acid kinase (NCBI) 0.49 b2142 yohK predicted inner membrane protein (NCBI) low > 76
Escherichia coli ECOR27 0.50 NOLOHH_18005 anmK anhydro-N-acetylmuramic acid kinase 0.49 NOLOHH_15145 yohK CidB/LrgB family autolysis modulator low > 75
Escherichia coli ECRC101 0.50 MCAODC_17925 anmK anhydro-N-acetylmuramic acid kinase 0.48 MCAODC_14625 yohK CidB/LrgB family autolysis modulator low > 87
Escherichia coli ECRC62 0.50 BNILDI_16795 anmK anhydro-N-acetylmuramic acid kinase 0.49 BNILDI_14065 yohK CidB/LrgB family autolysis modulator low > 75
Escherichia coli ECRC99 0.50 KEDOAH_00620 anmK anhydro-N-acetylmuramic acid kinase 0.48 KEDOAH_04610 yohK CidB/LrgB family autolysis modulator — —
Escherichia coli Nissle 1917 0.50 ECOLIN_RS09150 anhydro-N-acetylmuramic acid kinase 0.48 ECOLIN_RS12540 CidB/LrgB family autolysis modulator — —
Escherichia fergusonii Becca 0.50 EFB2_02352 Anhydro-N-acetylmuramic acid kinase 0.49 EFB2_01714 Inner membrane protein YohK low > 86
Klebsiella michiganensis M5al 0.50 BWI76_RS16420 anhydro-N-acetylmuramic acid kinase 0.49 BWI76_RS19605 CidB/LrgB family autolysis modulator low > 92
Pantoea sp. MT58 0.50 IAI47_10710 anhydro-N-acetylmuramic acid kinase 0.43 IAI47_06765 CidB/LrgB family autolysis modulator low > 76
Erwinia tracheiphila SCR3 0.48 LU632_RS11250 anmK anhydro-N-acetylmuramic acid kinase 0.45 LU632_RS08560 CidB/LrgB family autolysis modulator low > 74
Erwinia amylovora T8 0.48 OLJFJH_14440 anhydro-N-acetylmuramic acid kinase 0.42 OLJFJH_11880 Inner membrane protein yohK low > 58
Pseudomonas sp. S08-1 0.46 OH686_15205 Anhydro-N-acetylmuramic acid kinase 0.25 OH686_09360 LrgA-associated membrane protein LrgB low > 80
Pseudomonas sp. BP01 0.45 JOY50_RS18300 anhydro-N-acetylmuramic acid kinase 0.25 JOY50_RS17660 LrgB family protein low > 84
Pseudomonas putida KT2440 0.45 PP_0434 Anhydro-N-acetylmuramic acid kinase 0.24 PP_4815 putative Membrane protein low > 96
Pseudomonas sp. DMC3 0.44 GFF3 Anhydro-N-acetylmuramic acid kinase 0.26 GFF3867 Inner membrane protein YohK low > 89
Marinobacter adhaerens HP15 0.44 HP15_356 anhydro-N-acetylmuramic acid kinase 0.28 HP15_2943 LrgB family protein low > 73
Pseudomonas sp. RS175 0.43 PFR28_04031 Anhydro-N-acetylmuramic acid kinase 0.27 PFR28_03876 Inner membrane protein YohK low > 88
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_2562 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) 0.25 Pf1N1B4_2683 LrgA-associated membrane protein LrgB — —
Pseudomonas fluorescens FW300-N2C3 0.42 AO356_14500 anhydro-N-acetylmuramic acid kinase 0.26 AO356_15270 hypothetical protein low > 104
Pseudomonas aeruginosa PA14 0.42 IKLFDK_22095 anhydro-N-acetylmuramic acid kinase 0.26 IKLFDK_20695 LrgB-like family low > 101
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_1235 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) 0.26 PfGW456L13_1351 LrgA-associated membrane protein LrgB low > 87
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_07145 anhydro-N-acetylmuramic acid kinase 0.25 AO353_06515 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N2E2 0.42 Pf6N2E2_4838 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) 0.26 Pf6N2E2_4989 LrgA-associated membrane protein LrgB low > 103
Pseudomonas syringae pv. syringae B728a 0.41 Psyr_4567 Protein of unknown function UPF0075 0.26 Psyr_0637 LrgB-like protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.41 Psyr_4567 Protein of unknown function UPF0075 0.26 Psyr_0637 LrgB-like protein low > 86
Pseudomonas fluorescens SBW25 0.41 PFLU_RS27305 anhydro-N-acetylmuramic acid kinase 0.24 PFLU_RS26700 LrgB family protein low > 109
Methylophilus sp. DMC18 0.41 GFF2779 Anhydro-N-acetylmuramic acid kinase 0.24 GFF2279 Antiholin-like protein LrgB low > 43
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS27305 anhydro-N-acetylmuramic acid kinase 0.24 PFLU_RS26700 LrgB family protein low > 109
Pseudomonas stutzeri RCH2 0.40 Psest_3637 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 0.29 Psest_0505 Putative effector of murein hydrolase low > 67
Alteromonas macleodii MIT1002 0.39 MIT1002_03153 Anhydro-N-acetylmuramic acid kinase 0.30 MIT1002_00933 Inner membrane protein YohK low > 70
Variovorax sp. OAS795 0.37 ABID97_RS24970 anhydro-N-acetylmuramic acid kinase 0.32 ABID97_RS17375 LrgB family protein low > 91
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS07595 anhydro-N-acetylmuramic acid kinase 0.26 ABZR87_RS01160 LrgB family protein low > 80
Ralstonia solanacearum PSI07 0.36 RPSI07_RS21585 anhydro-N-acetylmuramic acid kinase 0.30 RPSI07_RS11790 LrgB family protein low > 81
Herbaspirillum seropedicae SmR1 0.36 HSERO_RS02010 anhydro-N-acetylmuramic acid kinase 0.32 HSERO_RS14495 membrane protein low > 78
Ralstonia solanacearum IBSBF1503 0.36 RALBFv3_RS11635 anhydro-N-acetylmuramic acid kinase 0.28 RALBFv3_RS05510 LrgB family protein low > 76
Ralstonia solanacearum UW163 0.36 UW163_RS01950 anhydro-N-acetylmuramic acid kinase 0.28 UW163_RS08115 LrgB family protein — —
Ralstonia solanacearum GMI1000 0.35 RS_RS02460 anhydro-N-acetylmuramic acid kinase 0.30 RS_RS13370 LrgB family protein low > 80
Variovorax sp. SCN45 0.34 GFF2064 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.170) 0.28 GFF436 LrgA-associated membrane protein LrgB low > 127
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_04259 anhydro-N-acetylmuramic acid kinase 0.32 H281DRAFT_02851 TIGR00659 family protein — —
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS16645 anhydro-N-acetylmuramic acid kinase 0.29 BPHYT_RS26565 membrane protein — —
Paraburkholderia graminis OAS925 0.33 ABIE53_003499 anhydro-N-acetylmuramic acid kinase 0.31 ABIE53_005942 putative murein hydrolase (TIGR00659 family) low > 113
Cupriavidus basilensis FW507-4G11 0.33 RR42_RS02660 anhydro-N-acetylmuramic acid kinase 0.31 RR42_RS17325 membrane protein low > 128
Rhodopseudomonas palustris CGA009 0.26 TX73_012725 anhydro-N-acetylmuramic acid kinase 0.22 TX73_002825 LrgB family protein low > 86
Azospirillum brasilense Sp245 0.26 AZOBR_RS05815 anhydro-N-acetylmuramic acid kinase 0.28 AZOBR_RS12150 membrane protein low > 97
Rhodospirillum rubrum S1H 0.26 Rru_A2031 Protein of unknown function UPF0075 (NCBI) 0.28 Rru_A2427 LrgB-like protein (NCBI) low > 58
Azospirillum sp. SherDot2 0.25 MPMX19_01987 Anhydro-N-acetylmuramic acid kinase 0.24 MPMX19_01820 Inner membrane protein YohK low > 112
Bosea sp. OAE506 0.25 ABIE41_RS00035 anhydro-N-acetylmuramic acid kinase 0.32 ABIE41_RS15710 LrgB family protein low > 77
Magnetospirillum magneticum AMB-1 0.23 AMB_RS15285 anhydro-N-acetylmuramic acid kinase 0.31 AMB_RS06665 LrgB family protein low > 64
Dinoroseobacter shibae DFL-12 0.19 Dshi_2150 protein of unknown function UPF0075 (RefSeq) 0.26 Dshi_0156 LrgB family protein (RefSeq) low > 64

Not shown: 32 genomes with orthologs for CSW01_03615 only; 8 genomes with orthologs for CSW01_06230 only