Conservation of cofitness between CSW01_05335 and CSW01_06085 in Vibrio cholerae E7946 ATCC 55056

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_05335 NAD(P)H nitroreductase 1.0 CSW01_06085 urocanate hydratase 0.43 14
Dickeya dadantii 3937 0.60 DDA3937_RS10295 NAD(P)H nitroreductase 0.72 DDA3937_RS14990 urocanate hydratase low > 74
Serratia liquefaciens MT49 0.59 IAI46_14320 NAD(P)H nitroreductase 0.76 IAI46_03665 urocanate hydratase low > 87
Rahnella sp. WP5 0.59 EX31_RS06310 NAD(P)H nitroreductase 0.71 EX31_RS06760 urocanate hydratase low > 89
Dickeya dianthicola ME23 0.58 DZA65_RS10780 NAD(P)H nitroreductase 0.70 DZA65_RS15830 urocanate hydratase low > 75
Escherichia coli ECOR38 0.58 HEPCGN_05190 ydjA NAD(P)H nitroreductase 0.70 HEPCGN_01335 hutU urocanate hydratase low > 88
Dickeya dianthicola 67-19 0.58 HGI48_RS10305 NAD(P)H nitroreductase 0.71 HGI48_RS15085 urocanate hydratase low > 71
Enterobacter asburiae PDN3 0.55 EX28DRAFT_1766 Nitroreductase 0.74 EX28DRAFT_2220 urocanate hydratase (EC 4.2.1.49) low > 76
Klebsiella michiganensis M5al 0.55 BWI76_RS11590 NAD(P)H nitroreductase 0.74 BWI76_RS08735 Urocanate hydratase (EC 4.2.1.49) (from data) — —
Pantoea sp. MT58 0.55 IAI47_08975 NAD(P)H nitroreductase 0.71 IAI47_13280 urocanate hydratase 0.21 63
Klebsiella pneumoniae MKP103 0.55 KDGMDA_19260 NAD(P)H nitroreductase 0.75 KDGMDA_17000 urocanate hydratase low > 95
Pantoea agglomerans CFBP13505 P0401 0.53 PagCFBP13505_RS02810 NAD(P)H nitroreductase 0.71 PagCFBP13505_RS04040 urocanate hydratase low > 74
Enterobacter sp. TBS_079 0.53 MPMX20_01851 Putative NAD(P)H nitroreductase YdjA 0.75 MPMX20_01399 Urocanate hydratase low > 85
Alteromonas macleodii MIT1002 0.52 MIT1002_01842 Putative NAD(P)H nitroreductase YdjA 0.80 MIT1002_00904 Urocanate hydratase low > 70
Shewanella sp. ANA-3 0.51 Shewana3_2494 nitroreductase (RefSeq) 0.79 Shewana3_0100 urocanate hydratase (RefSeq) low > 73
Erwinia amylovora T8 0.51 OLJFJH_13250 NAD(P)H nitroreductase 0.72 OLJFJH_16545 urocanate hydratase low > 58
Shewanella loihica PV-4 0.50 Shew_1740 nitroreductase (RefSeq) 0.80 Shew_3757 urocanate hydratase (RefSeq) — —
Shewanella oneidensis MR-1 0.48 SO2708 nitroreductase family protein (NCBI ptt file) 0.79 SO0097 hutU urocanate hydratase (NCBI ptt file) low > 76
Azospirillum brasilense Sp245 0.48 AZOBR_RS29250 oxidoreductase 0.73 AZOBR_RS21740 urocanate hydratase — —
Shewanella amazonensis SB2B 0.45 Sama_1457 nitroreductase family protein (RefSeq) 0.26 Sama_1632 Urocanate hydratase (EC 4.2.1.49) (from data) low > 62
Pseudomonas fluorescens FW300-N2C3 0.42 AO356_03990 nitroreductase 0.75 AO356_09630 Urocanate hydratase (EC 4.2.1.49) (from data) low > 104
Pseudomonas sp. RS175 0.41 PFR28_00799 Putative NAD(P)H nitroreductase YdjA 0.75 PFR28_04965 Urocanate hydratase low > 88
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_2633 Nitroreductase family protein 0.75 Pf6N2E2_3805 Urocanate hydratase (EC 4.2.1.49) (from data) low > 103
Pseudomonas lactucae CFBP13502 0.40 GEMAOFIL_04699 Putative NAD(P)H nitroreductase YdjA 0.76 GEMAOFIL_00568 Urocanate hydratase low > 96
Pseudomonas orientalis W4I3 0.39 QF045_RS24920 NAD(P)H nitroreductase 0.76 QF045_RS04785 urocanate hydratase low > 93
Pseudomonas aeruginosa PA14 0.39 IKLFDK_16305 nitroreductase 0.76 IKLFDK_28020 urocanate hydratase low > 98
Pseudomonas simiae WCS417 0.39 PS417_22730 nitroreductase 0.75 PS417_01720 Urocanate hydratase (EC 4.2.1.49) (from data) — —
Pseudomonas aeruginosa PUPa3 0.39 DQ20_RS40165 nitroreductase family protein 0.76 DQ20_RS50770 hutU;go_function=urocanate urocanate hydratase low > 101
Pseudomonas fluorescens SBW25 0.39 PFLU_RS24370 NAD(P)H nitroreductase 0.75 PFLU_RS01775 urocanate hydratase low > 109
Pseudomonas aeruginosa MRSN321 0.39 DY961_RS00875 nitroreductase family protein 0.76 DY961_RS11325 hutU;go_function=urocanate urocanate hydratase low > 100
Pseudomonas fluorescens SBW25-INTG 0.39 PFLU_RS24370 NAD(P)H nitroreductase 0.75 PFLU_RS01775 urocanate hydratase low > 109
Pseudomonas putida KT2440 0.39 PP_4506 Nitroreductase family protein 0.76 PP_5033 Urocanate hydratase low > 96
Pseudomonas sp. BP01 0.39 JOY50_RS01105 NAD(P)H nitroreductase 0.76 JOY50_RS09520 hutU urocanate hydratase low > 84
Pseudomonas sp. SVBP6 0.38 COO64_RS21790 NAD(P)H nitroreductase 0.76 COO64_RS13410 hutU urocanate hydratase low > 93
Pseudomonas fluorescens FW300-N1B4 0.37 Pf1N1B4_3544 Nitroreductase family protein 0.76 Pf1N1B4_1587 Urocanate hydratase (EC 4.2.1.49) (from data) low > 87
Pseudomonas sp. S08-1 0.37 OH686_20760 Putative NAD(P)H nitroreductase YdjA 0.76 OH686_16745 urocanate hydratase low > 80
Pseudomonas fluorescens GW456-L13 0.37 PfGW456L13_4412 Nitroreductase family protein 0.75 PfGW456L13_326 Urocanate hydratase (EC 4.2.1.49) (from data) low > 87
Pseudomonas syringae pv. syringae B728a 0.37 Psyr_3592 Nitroreductase 0.76 Psyr_4828 urocanate hydratase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.37 Psyr_3592 Nitroreductase 0.76 Psyr_4828 urocanate hydratase low > 86
Pseudomonas sp. DMC3 0.36 GFF2391 Putative NAD(P)H nitroreductase YdjA 0.76 GFF4062 Urocanate hydratase low > 89
Pseudomonas segetis P6 0.36 MPMX49_02919 Putative NAD(P)H nitroreductase YdjA 0.75 MPMX49_03963 Urocanate hydratase low > 75
Kangiella aquimarina DSM 16071 0.33 B158DRAFT_1412 Nitroreductase 0.79 B158DRAFT_1433 urocanate hydratase (EC 4.2.1.49) low > 40
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_18485 nitroreductase 0.76 AO353_12250 Urocanate hydratase (EC 4.2.1.49) (from data) low > 101
Variovorax sp. SCN45 0.30 GFF205 Nitroreductase family protein 0.71 GFF6408 Urocanate hydratase (EC 4.2.1.49) low > 127
Acinetobacter baumannii LAC-4 0.30 RR41_RS06315 nitroreductase 0.76 RR41_RS00380 urocanate hydratase low > 55
Burkholderia phytofirmans PsJN 0.29 BPHYT_RS35735 nitroreductase 0.76 BPHYT_RS07565 urocanate hydratase low > 109
Bosea sp. OAE506 0.28 ABIE41_RS14115 nitroreductase 0.72 ABIE41_RS23655 urocanate hydratase — —
Sphingobium sp. HT1-2 0.28 GFF2310 FIG002003: Protein YdjA 0.75 GFF1214 Urocanate hydratase (EC 4.2.1.49) low > 95
Castellaniella sp019104865 MT123 0.26 ABCV34_RS04210 nitroreductase 0.68 ABCV34_RS12785 urocanate hydratase low > 48
Agrobacterium fabrum C58 0.26 Atu1744 nitroreductase family protein 0.72 Atu3931 urocanate hydratase low > 89
Xanthomonas campestris pv. campestris strain 8004 0.26 Xcc-8004.4214.1 Oxygen-insensitive NADPH nitroreductase (EC 1.-.-.-) 0.71 Xcc-8004.3298.1 Urocanate hydratase (EC 4.2.1.49) low > 74
Lysobacter sp. OAE881 0.26 ABIE51_RS05520 nitroreductase 0.72 ABIE51_RS06295 urocanate hydratase low > 62
Paraburkholderia graminis OAS925 0.25 ABIE53_001681 nitroreductase 0.76 ABIE53_001731 urocanate hydratase low > 113
Sphingomonas koreensis DSMZ 15582 0.25 Ga0059261_1311 Nitroreductase 0.75 Ga0059261_3961 Urocanate hydratase (EC 4.2.1.49) (from data) low > 68
Rhodanobacter denitrificans MT42 0.25 LRK55_RS03610 nitroreductase 0.73 LRK55_RS16070 urocanate hydratase low > 63
Rhodanobacter sp. FW510-T8 0.25 OKGIIK_10710 Putative NAD(P)H nitroreductase 0.73 OKGIIK_08350 hutU urocanate hydratase low > 53
Brevundimonas sp. GW460-12-10-14-LB2 0.24 A4249_RS08265 nitroreductase 0.69 A4249_RS06625 urocanate hydratase low > 48
Rhodanobacter sp000427505 FW510-R12 0.24 LRK53_RS06080 nitroreductase 0.72 LRK53_RS12480 urocanate hydratase low > 59
Rhizobium sp. OAE497 0.24 ABIE40_RS09685 nitroreductase 0.72 ABIE40_RS20360 urocanate hydratase low > 107
Rhodanobacter denitrificans FW104-10B01 0.24 LRK54_RS03860 nitroreductase 0.73 LRK54_RS16320 urocanate hydratase low > 59
Dyella japonica UNC79MFTsu3.2 0.24 ABZR86_RS22155 nitroreductase 0.74 ABZR86_RS07755 urocanate hydratase low > 74
Phaeobacter inhibens DSM 17395 0.23 PGA1_c24460 putative nitroreductase 0.72 PGA1_c36320 Urocanate hydratase (EC 4.2.1.49) (from data) low > 62
Hydrogenophaga sp. GW460-11-11-14-LB1 0.23 GFF5834 nitroreductase 0.69 GFF3590 Urocanate hydratase (EC 4.2.1.49) — —
Sinorhizobium meliloti 1021 0.22 SMc01012 hypothetical protein 0.72 SM_b21163 Urocanate hydratase (EC 4.2.1.49) (from data) low > 103
Cellulophaga baltica 18 0.17 M666_RS07235 nitroreductase 0.27 M666_RS07215 urocanate hydratase low > 67

Not shown: 24 genomes with orthologs for CSW01_05335 only; 21 genomes with orthologs for CSW01_06085 only